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hypothetical_protein_APZ24_gp096
Euk-VirOstreococcus_lucimarinus_virus_2
hypothetical_protein_APZ24_gp096__YP_009172587__Ostreococcus_lucimarinus_virus_2__1663208
Identity
- Accession:
- YP_009172587 ↗
- Protein ID:
- hypothetical_protein_APZ24_gp096
- Kingdom:
- euk
Quality
62.9
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Algavirales›
Phycodnaviridae›
Prasinovirus›
Ostreococcus_lucimarinus_virus_2
TaxID: 1663208
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-62
D2
medium
residues 74-106_250-289_304-321
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1i9zA00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.52 | 38.0 | 2.67e-01 | 80.2% | 47.9% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3508722 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.57 | 48.0 | 4.47e-01 | 96.7% | 93.3% |
| 3862301 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.53 | 39.0 | 2.47e-01 | 79.1% | 82.5% |
| 4590266 | 10.1.1.24 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Cleaved_Adhesin | 0.52 | 40.0 | 3.14e-01 | 81.3% | 80.5% |
D3
medium
residues 107-249_290-303_322-337
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2j73A00 | 2.60.40.1110 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 31.0 | 3.82e-01 | 86.1% | 82.5% |
| 3dcdA00 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.55 | 40.0 | 3.40e-01 | 75.7% | 95.3% |
| 4ecnA01 | 2.60.40.3540 | Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4458 | 0.51 | 28.0 | 3.56e-01 | 86.7% | 89.3% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3588650 | 6161.1.1.2 ↗ | a+b two layers › Uncharacterized virus protein A-100 › Uncharacterized virus protein A-100 › Uncharacterized virus protein A-100 › SWIM | 0.63 | 20.0 | 3.06e-01 | 78.6% | 64.0% |
| 4999368 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.50 | 36.0 | 3.63e-01 | 72.8% | 86.1% |