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hypothetical_protein_APZ24_gp131
Euk-VirOstreococcus_lucimarinus_virus_2
hypothetical_protein_APZ24_gp131__YP_009172622__Ostreococcus_lucimarinus_virus_2__1663208
Identity
- Accession:
- YP_009172622 ↗
- Protein ID:
- hypothetical_protein_APZ24_gp131
- Kingdom:
- euk
Quality
54.6
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Algavirales›
Phycodnaviridae›
Prasinovirus›
Ostreococcus_lucimarinus_virus_2
TaxID: 1663208
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 40-164
D2
high
residues 401-513
Domain cluster:
rep: S16_GE16_scaffold_10741_prodigal-single.1__X__X__00139__D134-247
D3
medium
residues 215-247
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1vinA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.63 | 48.0 | 3.35e-01 | 100.0% | 29.5% |
| 1fcdC01 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.55 | 40.0 | 3.39e-01 | 100.0% | 88.5% |
| 1miwA03 | 1.20.58.560 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 38.0 | 3.12e-01 | 100.0% | 33.0% |
| 5w6lA01 | 3.40.50.11550 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 39.0 | 2.58e-01 | 100.0% | 14.5% |
| 3icxA02 | 1.10.150.460 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.54 | 41.0 | 3.76e-01 | 100.0% | 61.5% |
| 4c0zA02 | 1.10.150.480 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.54 | 39.0 | 3.10e-01 | 97.0% | 49.0% |
| 3t0yA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 40.0 | 3.59e-01 | 100.0% | 63.3% |
| 2e62A01 | 6.10.140.420 | Special › Helix non-globular › Helix Hairpins › | 0.54 | 38.0 | 3.47e-01 | 78.8% | 65.4% |
| 5fgmA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 41.0 | 3.47e-01 | 97.0% | 55.4% |
| 1ykhA00 | 6.10.140.200 | Special › Helix non-globular › Helix Hairpins › | 0.52 | 37.0 | 2.87e-01 | 84.8% | 31.6% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3208939 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.69 | 51.0 | 2.89e-01 | 100.0% | 7.0% |
| 3783344 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.66 | 49.0 | 3.86e-01 | 100.0% | 34.7% |
| 5065844 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.65 | 47.0 | 2.80e-01 | 100.0% | 9.7% |
| 4959695 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 48.0 | 4.75e-01 | 90.9% | 82.9% |
| 4994269 | 101.1.2.673 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N | 0.61 | 49.0 | 3.80e-01 | 100.0% | 81.2% |
| 4989929 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.61 | 45.0 | 4.36e-01 | 100.0% | 73.3% |
| 3452941 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.58 | 46.0 | 4.23e-01 | 100.0% | 74.0% |
| 4408837 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.58 | 45.0 | 3.11e-01 | 100.0% | 28.3% |
| 5073679 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.55 | 45.0 | 3.52e-01 | 100.0% | 47.5% |
D4
medium
residues 259-288