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hypothetical_protein_APZ24_gp154

Euk-Vir

Ostreococcus_lucimarinus_virus_2

hypothetical_protein_APZ24_gp154__YP_009172645__Ostreococcus_lucimarinus_virus_2__1663208

Identity

Accession:
YP_009172645 ↗
Protein ID:
hypothetical_protein_APZ24_gp154
Kingdom:
euk

Quality

66.2 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Algavirales› Phycodnaviridae› Prasinovirus› Ostreococcus_lucimarinus_virus_2

TaxID: 1663208

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 50-101_123-196
PDB
Domain cluster: representative
CATH (26)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3q48A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.73 39.0 4.79e-01 100.0% 80.7%
4g5aA00 2.60.40.3080 Mainly Beta › Sandwich › Immunoglobulin-like › 0.67 38.0 4.21e-01 100.0% 69.7%
2xg5A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 37.0 4.20e-01 100.0% 77.2%
2a6vB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.60 45.0 3.81e-01 79.4% 72.4%
3cwzB03 2.60.60.20 Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain 0.60 49.0 4.99e-01 100.0% 90.9%
4a5wA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 42.0 4.55e-01 100.0% 86.7%
6kcvA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.59 44.0 3.64e-01 80.2% 69.2%
2zaiB03 2.60.40.3020 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 36.0 3.92e-01 100.0% 72.9%
1zpuA02 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.56 40.0 3.56e-01 100.0% 51.1%
3ks7A02 2.60.120.230 Mainly Beta › Sandwich › Jelly Rolls › 0.55 42.0 3.73e-01 81.0% 77.1%
4b60A02 2.60.40.1290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 45.0 4.21e-01 92.1% 73.7%
3zx1A02 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.53 37.0 3.48e-01 100.0% 55.9%
2xliA01 3.30.70.2540 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › CRISPR-associated endoribonuclease Cas6/Csy4 0.53 37.0 3.52e-01 81.7% 58.3%
3wucB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 40.0 3.93e-01 80.2% 86.1%
3ap9A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 40.0 3.84e-01 81.0% 84.1%
2x9zA01 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 44.0 4.24e-01 98.4% 77.9%
1a78A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 40.0 3.96e-01 80.2% 88.8%
2pnqA00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.53 47.0 3.37e-01 100.0% 64.1%
1m1sA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 37.0 3.90e-01 100.0% 83.5%
3zsjA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 40.0 3.91e-01 81.0% 89.9%
1j8rA00 2.60.40.1370 Mainly Beta › Sandwich › Immunoglobulin-like › Bacterial adhesin receptor binding domain 0.52 48.0 4.10e-01 100.0% 83.2%
4ei0A01 2.60.40.3550 Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4466 0.52 43.0 4.18e-01 100.0% 81.6%
2wq4A01 2.60.120.760 Mainly Beta › Sandwich › Jelly Rolls › 0.52 36.0 3.66e-01 79.4% 71.3%
1w0pA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 45.0 4.02e-01 100.0% 68.9%
3zypA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.50 39.0 3.30e-01 82.5% 70.5%
2q1mA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.50 34.0 3.58e-01 89.7% 75.9%
ECOD (32)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3977373 11.1.1.42 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PapD_C 0.75 41.0 5.02e-01 100.0% 83.7%
4200085 11.1.1.42 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PapD_C 0.75 41.0 4.92e-01 99.2% 80.0%
3934332 10.32.1.105 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF4457 0.74 69.0 6.25e-01 100.0% 86.7%
5035963 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.63 47.0 5.13e-01 100.0% 94.3%
3350200 362.1.1.1 ↗ few secondary structure elements › P-domain of calnexin/calreticulin › P-domain of calnexin/calreticulin › P-domain of calnexin/calreticulin › Calreticulin 0.63 48.0 3.35e-01 80.2% 37.6%
3207356 10.1.1.22 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › DUF1349 0.62 45.0 3.88e-01 75.4% 67.5%
3274730 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 42.0 4.26e-01 100.0% 70.4%
4327708 11.1.5.85 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › PFF1_C 0.61 43.0 4.62e-01 100.0% 84.3%
5067704 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.61 46.0 4.11e-01 80.2% 62.2%
3969165 11.1.1.42 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PapD_C 0.60 37.0 4.15e-01 100.0% 80.0%
3257679 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.60 40.0 4.36e-01 80.2% 81.9%
4956128 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 40.0 4.28e-01 100.0% 81.9%
5036667 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 40.0 4.27e-01 100.0% 82.9%
5061003 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 38.0 4.13e-01 100.0% 82.0%
4991747 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 36.0 3.92e-01 100.0% 75.2%
3621194 11.2.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.56 42.0 4.19e-01 92.9% 76.6%
3580761 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.56 45.0 3.61e-01 88.1% 84.9%
3607773 10.1.1.56 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › TS_C 0.56 43.0 3.52e-01 81.0% 58.3%
3252859 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 36.0 3.95e-01 83.3% 81.0%
3259884 11.2.1.12 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › DOCK-C2 0.56 50.0 4.55e-01 100.0% 84.7%
4999321 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 39.0 4.25e-01 99.2% 87.6%
5039010 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.55 42.0 4.19e-01 81.0% 84.6%
3930059 11.2.1.6 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › MNNL 0.54 42.0 4.51e-01 99.2% 95.5%
3264222 10.1.1.35 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 0.54 45.0 3.63e-01 91.3% 89.2%
2528413 11.1.5.39 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › DUF4466 0.54 43.0 4.22e-01 100.0% 79.1%
3538041 11.1.1.297 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Integrin_A_Ig_2 0.54 43.0 4.02e-01 100.0% 67.3%
3277405 10.1.1.35 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 0.53 44.0 3.57e-01 88.9% 89.1%
5039956 10.1.2.184 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PepX_C 0.53 39.0 3.48e-01 79.4% 71.1%
3932418 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.51 37.0 4.01e-01 98.4% 91.4%
3933859 10.7.1.0 ↗ beta sandwiches › jelly-roll › Hypothetical protein TM1070 › Hypothetical protein TM1070 0.51 38.0 4.06e-01 99.2% 93.3%
3304300 11.1.6.4 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › UPA domain › ERMP1_C 0.51 42.0 3.46e-01 100.0% 48.5%
2629771 10.1.1.47 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Polysacc_lyase_14 0.50 45.0 3.65e-01 100.0% 68.9%