←Back to structures
hypothetical_protein_AsGV085
Euk-VirAgrotis_segetum_granulovirus
hypothetical_protein_AsGV085__YP_009513115__Agrotis_segetum_granulovirus__10464
Identity
- Accession:
- YP_009513115 ↗
- Protein ID:
- hypothetical_protein_AsGV085
- Kingdom:
- euk
Quality
63.1
mean pLDDT
Taxonomy
TaxID: 10464
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 14-72
D2
high
residues 78-146
Domain cluster:
rep: hypothetical_protein__YP_009091914__Erinnyis_ello_granulovirus__307444__D6-68
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kavA00 | 1.20.1270.360 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.79 | 69.0 | 6.08e-01 | 97.1% | 98.0% |
| 5figA00 | 1.20.1270.360 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.76 | 65.0 | 5.75e-01 | 95.7% | 98.0% |
| 2b5dX02 | 1.20.1430.10 | Mainly Alpha › Up-down Bundle › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase, middle domain | 0.73 | 54.0 | 4.54e-01 | 78.3% | 70.2% |
| 2rldA00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.71 | 61.0 | 5.20e-01 | 97.1% | 88.6% |
| 4w8pA02 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.71 | 51.0 | 4.22e-01 | 78.3% | 84.6% |
| 4od4A02 | 1.20.120.1780 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › UbiA prenyltransferase | 0.68 | 48.0 | 4.04e-01 | 75.4% | 76.5% |
| 3t9oB00 | 1.20.120.30 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Aspartate receptor, ligand-binding domain | 0.66 | 47.0 | 3.95e-01 | 76.8% | 87.5% |
| 6q9jB02 | 1.20.1440.230 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain | 0.66 | 57.0 | 5.29e-01 | 100.0% | 90.9% |
| 1v9vA01 | 1.20.1480.20 | Mainly Alpha › Up-down Bundle › hypothetical protein mp506/mpn330, domain 1 › MAST3 pre-PK domain-like | 0.65 | 53.0 | 4.81e-01 | 91.3% | 100.0% |
| 3ls1A00 | 1.20.120.290 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Oxygen-evolving enhancer protein 3 (PsbQ), four-helix up-down bundle | 0.65 | 48.0 | 3.92e-01 | 79.7% | 64.7% |
| 3m9vA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.61 | 51.0 | 4.04e-01 | 98.6% | 72.0% |
| 2mx8A01 | 1.10.274.70 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, N-terminal domain | 0.60 | 50.0 | 4.37e-01 | 98.6% | 90.3% |
| 2dkhA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.59 | 42.0 | 2.91e-01 | 75.4% | 50.2% |
| 2yksA02 | 1.20.58.390 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Neurotransmitter-gated ion-channel transmembrane domain | 0.59 | 41.0 | 3.53e-01 | 73.9% | 63.2% |
| 2o3fA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 48.0 | 4.60e-01 | 92.8% | 84.1% |
| 2ntxA02 | 1.20.58.1310 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › PRONE domain, subdomain 2 | 0.59 | 41.0 | 3.58e-01 | 72.5% | 94.2% |
| 2hfiA00 | 1.20.120.440 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YppE-like | 0.59 | 43.0 | 3.70e-01 | 82.6% | 87.8% |
| 3iwfB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 46.0 | 4.30e-01 | 89.9% | 73.0% |
| 3l9fA02 | 6.10.140.1570 | Special › Helix non-globular › Helix Hairpins › | 0.57 | 43.0 | 4.12e-01 | 81.2% | 100.0% |
| 2rg8A00 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.57 | 39.0 | 3.12e-01 | 72.5% | 47.3% |
| 2b6cA02 | 1.25.40.290 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › ARM repeat domains | 0.56 | 41.0 | 3.70e-01 | 78.3% | 89.7% |
| 2l9bA00 | 1.25.40.630 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.56 | 38.0 | 3.49e-01 | 71.0% | 57.1% |
| 4aqnA02 | 1.10.530.40 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.55 | 46.0 | 3.48e-01 | 100.0% | 35.2% |
| 3oz2A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.55 | 39.0 | 2.74e-01 | 72.5% | 30.0% |
| 4n06A02 | 1.20.120.920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain | 0.55 | 37.0 | 2.56e-01 | 100.0% | 18.6% |
| 7dniB01 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.54 | 46.0 | 4.34e-01 | 100.0% | 77.5% |
| 3nwoA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.53 | 42.0 | 2.80e-01 | 87.0% | 21.1% |
| 2qq8A02 | 1.10.8.270 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › putative rabgap domain of human tbc1 domain family member 14 like domains | 0.53 | 33.0 | 3.02e-01 | 100.0% | 43.8% |
| 1paqA00 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.51 | 38.0 | 2.95e-01 | 81.2% | 68.9% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3222373 | 605.4.1.18 ↗ | alpha duplicates or obligate multimers › ROP-like › ROP protein › ROP protein › PF29357 | 0.72 | 53.0 | 4.97e-01 | 78.3% | 89.4% |
| 3997912 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.69 | 50.0 | 4.30e-01 | 78.3% | 83.5% |
| 4647635 | 138.1.1.2 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › Rep_fac_C | 0.61 | 42.0 | 4.02e-01 | 73.9% | 61.2% |
| 3711250 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 41.0 | 2.77e-01 | 73.9% | 39.6% |
| 5046243 | 106.1.1.2 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like › Phycobilisome | 0.58 | 45.0 | 3.79e-01 | 85.5% | 96.7% |
| 5032425 | 5060.2.1.1 ↗ | alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › T2SSF | 0.58 | 47.0 | 4.06e-01 | 98.6% | 56.5% |
| 3613851 | 109.4.1.266 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › XMAP215_CLASP_TOG | 0.57 | 43.0 | 2.43e-01 | 87.0% | 10.7% |
| 4014810 | 2004.1.1.216 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Sulfotransfer_4 | 0.56 | 45.0 | 3.10e-01 | 91.3% | 64.2% |
| 5065109 | 3054.1.1.0 ↗ | alpha arrays › Insert all-alpha domain in prim-pol › Insert all-alpha domain in prim-pol › Insert all-alpha domain in prim-pol | 0.56 | 43.0 | 4.06e-01 | 88.4% | 86.7% |
| 3887313 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.56 | 38.0 | 3.35e-01 | 73.9% | 82.6% |
| 4015776 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 39.0 | 2.80e-01 | 75.4% | 50.9% |
| None | — | 0.54 | 46.0 | 2.92e-01 | 100.0% | 33.8% |
D3
high
residues 179-279
Domain cluster:
rep: Clas68__YP_009506010__Clostera_anastomosis_granulovirus_B__1986290__D100-111_126-200
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1dgnA00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.64 | 44.0 | 4.64e-01 | 82.2% | 79.8% |
| 2yguC00 | 1.10.238.190 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › | 0.61 | 46.0 | 4.40e-01 | 81.2% | 94.1% |
| 1td6A01 | 1.20.1480.10 | Mainly Alpha › Up-down Bundle › hypothetical protein mp506/mpn330, domain 1 › hypothetical protein mp506/mpn330, domain 1 | 0.59 | 39.0 | 3.92e-01 | 77.2% | 66.7% |
| 2etdA00 | 1.20.1440.20 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › LemA-like domain | 0.58 | 42.0 | 3.79e-01 | 75.2% | 56.7% |
| 5zzjA02 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.58 | 42.0 | 3.03e-01 | 77.2% | 87.5% |
| 4ikmA02 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.56 | 40.0 | 4.11e-01 | 87.1% | 80.6% |
| 3dxlA02 | 1.10.238.20 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain | 0.54 | 42.0 | 3.76e-01 | 85.1% | 82.9% |
| 3p9dG01 | 1.10.560.10 | Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain | 0.54 | 40.0 | 3.06e-01 | 79.2% | 61.7% |
| 3qbrX00 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.54 | 44.0 | 3.87e-01 | 91.1% | 98.8% |
| 7ccmB01 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.53 | 42.0 | 3.82e-01 | 87.1% | 100.0% |
| 7wz5A01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.53 | 41.0 | 3.63e-01 | 83.2% | 96.7% |
| 4gytA00 | 1.20.120.740 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YgfB uncharacterised protein family PF03695 | 0.52 | 40.0 | 3.38e-01 | 84.2% | 81.9% |
| 4zfvB01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.50 | 41.0 | 3.40e-01 | 100.0% | 49.2% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3468141 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.62 | 45.0 | 3.72e-01 | 76.2% | 50.3% |
| 2875223 | 138.1.1.0 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain | 0.62 | 44.0 | 4.59e-01 | 76.2% | 94.7% |
| 3429128 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.61 | 44.0 | 4.17e-01 | 77.2% | 94.4% |
| 3814259 | 1075.5.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › MatE | 0.59 | 45.0 | 3.41e-01 | 80.2% | 65.7% |
| 3950312 | 7059.1.1.1 ↗ | a+b complex topology › SatS C-terminal domain › SatS C-terminal domain › SatS C-terminal domain › PF31034 | 0.58 | 45.0 | 3.65e-01 | 84.2% | 43.6% |
| 3175217 | 622.1.1.27 ↗ | alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain › Rer1 | 0.56 | 46.0 | 4.71e-01 | 91.1% | 92.6% |
| 3692016 | 109.4.1.159 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ELMO_ARM | 0.54 | 37.0 | 2.81e-01 | 76.2% | 28.1% |
| 4971098 | 140.1.1.0 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.52 | 44.0 | 3.67e-01 | 96.0% | 61.2% |
| 3710097 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 40.0 | 3.64e-01 | 84.2% | 84.3% |
| 3695198 | 6155.1.1.2 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › PQ-loop | 0.51 | 42.0 | 3.89e-01 | 95.0% | 69.2% |
| 3187357 | 6155.1.1.0 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter | 0.50 | 43.0 | 3.91e-01 | 95.0% | 70.0% |