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hypothetical_protein_AsGV139
Euk-VirAgrotis_segetum_granulovirus
hypothetical_protein_AsGV139__YP_009513169__Agrotis_segetum_granulovirus__10464
Identity
- Accession:
- YP_009513169 ↗
- Protein ID:
- hypothetical_protein_AsGV139
- Kingdom:
- euk
Quality
80.5
mean pLDDT
Taxonomy
TaxID: 10464
Cluster
View cluster (22 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 25-105
Domain cluster:
rep: ORF056__YP_009121841__Spodoptera_frugiperda_granulovirus__307454__D22-94
D2
high
residues 114-195
D3
high
residues 271-467
Domain cluster:
rep: ORF056__YP_009121841__Spodoptera_frugiperda_granulovirus__307454__D190-216_255-412
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13930.13 best | Endonuclea_NS_2 | 28.2 | 2.80e-06 | 53.8% | 56.1% |
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2xgrA00 | 3.40.570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Extracellular Endonuclease; Chain A › Extracellular Endonuclease, subunit A | 0.76 | 61.0 | 6.11e-01 | 97.5% | 82.2% |
| 6xu3D01 | 3.30.470.10 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain | 0.60 | 32.0 | 3.68e-01 | 88.3% | 68.5% |
| 3daaA01 | 3.30.470.10 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain | 0.57 | 32.0 | 3.95e-01 | 87.8% | 87.3% |
| 3lulA01 | 3.30.470.10 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain | 0.56 | 30.0 | 3.84e-01 | 88.3% | 89.3% |
| 3wwhA01 | 3.30.470.10 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain | 0.56 | 31.0 | 3.45e-01 | 88.3% | 67.3% |
| 3b7kC02 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.56 | 30.0 | 3.97e-01 | 96.4% | 94.5% |
| 2hhiA01 | 3.30.565.40 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Fervidobacterium nodosum Rt17-B1 like | 0.55 | 30.0 | 3.77e-01 | 84.8% | 86.4% |
| 2gvhB02 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.54 | 30.0 | 3.80e-01 | 98.5% | 89.7% |
| 1lshA03 | 2.20.50.20 | Mainly Beta › Single Sheet › Outer Surface Protein A; domain 2 › Lipovitellin. Chain A, domain 3 | 0.54 | 27.0 | 3.58e-01 | 89.8% | 90.8% |
| 4k02A00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.54 | 34.0 | 4.07e-01 | 92.4% | 95.3% |
| 2fs2B00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.53 | 34.0 | 4.03e-01 | 94.4% | 93.5% |
| 2f3xA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.52 | 32.0 | 3.66e-01 | 93.4% | 82.5% |
| 3er7B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 28.0 | 3.35e-01 | 74.1% | 80.5% |
| 2vugA03 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.50 | 27.0 | 3.58e-01 | 71.6% | 99.0% |
| 1a3gA01 | 3.30.470.10 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain | 0.50 | 31.0 | 3.63e-01 | 91.4% | 88.1% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4030765 | 378.1.1.11 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclea_NS_2 | 0.73 | 60.0 | 6.40e-01 | 99.0% | 96.6% |
| 3589217 | 378.1.1.11 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclea_NS_2 | 0.70 | 60.0 | 6.10e-01 | 100.0% | 91.6% |
| 2374 | 5087.3.1.1 ↗ | beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1C › Lipovitellin LV-1C › Vit_open_b-sht | 0.65 | 23.0 | 3.75e-01 | 74.6% | 86.8% |
| 1807481 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.64 | 61.0 | 5.76e-01 | 100.0% | 92.1% |
| 2466355 | 4099.1.1.4 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › CENP-O | 0.60 | 24.0 | 3.09e-01 | 81.2% | 58.8% |
| 4012208 | 222.1.1.0 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase | 0.54 | 37.0 | 4.15e-01 | 95.4% | 89.3% |
| 3209799 | 222.1.1.17 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PKS_DH_N | 0.54 | 36.0 | 4.14e-01 | 94.9% | 92.9% |
| 4525648 | 222.1.1.17 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PKS_DH_N | 0.54 | 35.0 | 4.13e-01 | 92.4% | 92.9% |
| 4016948 | 222.1.1.17 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PKS_DH_N | 0.54 | 37.0 | 4.21e-01 | 97.0% | 92.0% |
| 4429745 | 222.1.1.17 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PKS_DH_N | 0.53 | 37.0 | 4.15e-01 | 94.9% | 92.7% |
| 3347257 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.52 | 28.0 | 3.51e-01 | 84.8% | 87.0% |
| 4466408 | 222.1.1.17 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PKS_DH_N | 0.51 | 34.0 | 3.85e-01 | 94.9% | 87.3% |
| 4341773 | 222.1.1.0 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase | 0.51 | 39.0 | 4.15e-01 | 100.0% | 89.1% |
| 4042539 | 222.1.1.12 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PS-DH | 0.51 | 39.0 | 4.13e-01 | 100.0% | 89.1% |