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hypothetical_protein_B1750_gp277

Euk-Vir

Noumeavirus

hypothetical_protein_B1750_gp277__YP_009345422__Noumeavirus__1955558

Identity

Accession:
YP_009345422 ↗
Protein ID:
hypothetical_protein_B1750_gp277
Kingdom:
euk

Quality

70.0 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Marseilleviridae› Marseillevirus› Noumeavirus

TaxID: 1955558

Cluster

View cluster (37 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 23-112
PDB
Domain cluster: representative
CATH (35)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2h36X00 3.30.160.300 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.76 44.0 4.10e-01 71.1% 48.1%
6f1uK02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.72 61.0 5.12e-01 90.0% 71.0%
4akrA02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.71 60.0 5.04e-01 90.0% 71.4%
3tzgA00 2.40.160.150 Mainly Beta › Beta Barrel › Porin › 0.71 61.0 4.40e-01 96.7% 34.7%
1mmuA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.69 55.0 3.60e-01 83.3% 68.4%
3imhA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.69 55.0 3.66e-01 84.4% 66.6%
4fqeA00 2.40.160.40 Mainly Beta › Beta Barrel › Porin › monomeric porin ompg 0.68 57.0 4.60e-01 98.9% 48.2%
2oq8A00 2.60.40.2930 Mainly Beta › Sandwich › Immunoglobulin-like › 0.67 54.0 4.52e-01 85.6% 94.0%
1qj8A00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.66 60.0 5.07e-01 100.0% 72.3%
3ia8A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.65 54.0 4.48e-01 100.0% 50.6%
3gkeA02 3.90.380.10 Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 0.64 57.0 4.35e-01 98.9% 47.6%
4k7rA02 2.20.200.10 Mainly Beta › Single Sheet › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) 0.62 42.0 4.55e-01 70.0% 89.6%
6yfiB01 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.60 54.0 4.71e-01 98.9% 89.6%
6r3wA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.59 51.0 4.24e-01 96.7% 53.4%
2oojA00 2.40.350.10 Mainly Beta › Beta Barrel › AOC barrel-like › SO1590-like 0.59 51.0 4.54e-01 96.7% 66.4%
2q03A00 2.40.350.10 Mainly Beta › Beta Barrel › AOC barrel-like › SO1590-like 0.58 49.0 4.39e-01 98.9% 64.7%
3r87A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.57 41.0 3.59e-01 74.4% 88.6%
3e1eC00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.57 51.0 4.43e-01 100.0% 95.7%
3lh4A00 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 45.0 4.18e-01 85.6% 93.9%
1t17A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.56 45.0 3.81e-01 97.8% 52.0%
2k54A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 44.0 4.07e-01 88.9% 99.2%
2imjD01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 45.0 3.90e-01 88.9% 84.5%
5vawA01 3.30.700.10 Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › Glycoprotein, Type 4 Pilin 0.55 43.0 4.01e-01 84.4% 73.3%
1wnhA02 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 44.0 4.06e-01 87.8% 86.7%
3h4zB03 3.15.10.50 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › 0.55 49.0 3.87e-01 100.0% 95.8%
1txkA01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.55 48.0 3.25e-01 100.0% 51.5%
3d9rB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 42.0 3.72e-01 84.4% 97.0%
3b7cA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 39.0 3.62e-01 80.0% 100.0%
2gvhB02 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.53 39.0 3.61e-01 78.9% 94.0%
3f14A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 40.0 3.73e-01 81.1% 99.1%
1of5A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 42.0 3.51e-01 85.6% 85.7%
3e99A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 42.0 3.66e-01 94.4% 93.2%
3nv0B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 40.0 3.49e-01 84.4% 94.9%
1jkgA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 41.0 3.57e-01 87.8% 98.6%
3eyrA00 3.15.10.40 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Uncharacterised protein PF07273 family, DUF1439 0.50 42.0 3.52e-01 95.6% 57.4%
ECOD (44)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4226755 2004.1.1.782 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_23, AAA_29, SbcC_Walker_B 0.73 59.0 3.64e-01 84.4% 27.1%
3056279 4051.1.1.2 ↗ a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A 0.72 61.0 4.93e-01 90.0% 63.2%
3515197 4051.1.1.2 ↗ a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A 0.72 61.0 4.87e-01 90.0% 61.2%
3484227 4051.1.1.0 ↗ a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz 0.71 60.0 4.81e-01 90.0% 59.4%
4589836 5085.1.1.2 ↗ a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › PF27489, PF29296 0.71 65.0 4.08e-01 100.0% 56.6%
3243473 5087.1.1.0 ↗ beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-2 › Lipovitellin LV-2 0.71 65.0 4.67e-01 100.0% 78.4%
3351533 5084.5.1.23 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › TOC159_MAD 0.71 65.0 4.36e-01 98.9% 28.6%
3781112 3561.1.1.1 ↗ a+b complex topology › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 › Med17 0.70 61.0 3.75e-01 92.2% 21.0%
4025861 4051.1.1.1 ↗ a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B 0.69 61.0 4.88e-01 94.4% 71.8%
3601210 12.3.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.69 55.0 3.59e-01 84.4% 69.5%
3740154 1100.1.1.1 ↗ beta meanders › TIP41-like protein › TIP41-like protein › TIP41-like protein › TIP41 0.69 63.0 4.55e-01 100.0% 44.9%
3587919 12.3.1.3 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim 0.69 55.0 3.59e-01 83.3% 67.5%
3701306 331.3.1.17 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt 0.67 62.0 4.65e-01 100.0% 50.0%
3593049 331.3.1.0 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.67 61.0 4.61e-01 100.0% 49.5%
4031020 12.3.1.3 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim 0.67 53.0 3.55e-01 84.4% 69.1%
None — 0.66 60.0 5.07e-01 100.0% 72.3%
3273410 331.3.1.17 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt 0.66 60.0 4.73e-01 100.0% 54.1%
3544803 331.3.1.17 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt 0.66 59.0 4.62e-01 100.0% 49.2%
3708861 243.5.1.0 ↗ a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region 0.65 58.0 4.89e-01 97.8% 66.0%
3182639 3698.1.1.1 ↗ beta sandwiches › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › PRMT5_C 0.65 52.0 3.87e-01 86.7% 78.9%
5065294 4051.1.1.0 ↗ a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz 0.65 59.0 4.74e-01 98.9% 67.1%
3270456 331.3.1.17 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt 0.64 58.0 4.43e-01 96.7% 87.7%
3996943 331.3.1.17 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt 0.64 58.0 4.93e-01 100.0% 64.8%
3818841 331.3.1.17 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt 0.64 55.0 4.29e-01 93.3% 54.2%
3748213 331.3.1.17 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt 0.64 56.0 3.92e-01 95.6% 39.6%
3526427 5084.5.1.2 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 0.64 57.0 3.80e-01 100.0% 25.6%
3440523 331.3.1.17 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt 0.63 56.0 4.18e-01 97.8% 45.3%
3253394 79.1.1.0 ↗ beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain 0.62 55.0 4.46e-01 95.6% 58.3%
3639862 3698.1.1.1 ↗ beta sandwiches › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › PRMT5_C 0.61 52.0 4.09e-01 95.6% 97.4%
4668731 12.3.1.3 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim 0.60 52.0 3.54e-01 100.0% 91.4%
3381230 331.3.1.17 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt 0.59 47.0 4.35e-01 87.8% 67.0%
5034706 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.59 41.0 4.40e-01 77.8% 85.3%
3512269 79.1.1.16 ↗ beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › DUF1983 0.58 44.0 4.47e-01 82.2% 80.0%
5040972 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.57 40.0 4.40e-01 77.8% 88.0%
4926981 9.13.1.0 ↗ beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like 0.56 50.0 4.52e-01 100.0% 93.6%
3882544 243.3.1.4 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Latexin_N 0.55 44.0 4.03e-01 87.8% 86.7%
3805022 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.55 46.0 4.12e-01 91.1% 84.0%
5009713 243.1.1.1 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Ring_hydroxyl_B 0.54 46.0 3.85e-01 95.6% 96.9%
6421 243.3.1.4 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Latexin_N 0.54 44.0 4.08e-01 91.1% 89.9%
4948088 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 48.0 3.88e-01 100.0% 59.4%
3567279 243.3.1.4 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Latexin_N 0.53 42.0 3.88e-01 85.6% 89.6%
6390 243.1.1.25 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_3 0.51 38.0 3.46e-01 77.8% 98.3%
4676601 243.1.1.1 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Ring_hydroxyl_B 0.51 41.0 3.48e-01 94.4% 89.9%
3383116 511.1.1.1 ↗ beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › HSP70 0.50 43.0 3.79e-01 98.9% 93.7%