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hypothetical_protein_BNJ_00065
Euk-VirKaumoebavirus_Viruses.
hypothetical_protein_BNJ_00065__YP_009352487__Kaumoebavirus_Viruses.__X
Identity
- Accession:
- YP_009352487 ↗
- Protein ID:
- hypothetical_protein_BNJ_00065
- Kingdom:
- euk
Quality
63.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 21-194
Domain cluster:
rep: CG10_big_fil_rev_8_21_14_0-10_scaffold_17_prodigal-single.1__X__X__00080__D4-138
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF26128.2 best | Gad2 | 44.3 | 2.60e-11 | 85.1% | 70.8% |
D2
medium
residues 337-409
Domain cluster:
representative
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3208116 | 5.1.4.91 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › VID27 | 0.65 | 40.0 | 2.52e-01 | 90.4% | 11.0% |
| 1145756 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.60 | 41.0 | 3.50e-01 | 71.2% | 68.4% |
| 2075294 | 3712.1.1.1 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 11 › Mediator of RNA polymerase II transcription subunit 11 › Mediator of RNA polymerase II transcription subunit 11 › Med11 | 0.54 | 41.0 | 3.71e-01 | 80.8% | 82.8% |
| 3679952 | 103.4.1.0 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein | 0.53 | 37.0 | 3.81e-01 | 75.3% | 78.6% |
| 3468349 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 36.0 | 2.62e-01 | 72.6% | 39.5% |
| 3833720 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.50 | 40.0 | 2.18e-01 | 87.7% | 15.3% |