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hypothetical_protein_BNJ_00118

Euk-Vir

Kaumoebavirus_Viruses.

hypothetical_protein_BNJ_00118__YP_009352532__Kaumoebavirus_Viruses.__X

Identity

Accession:
YP_009352532 ↗
Protein ID:
hypothetical_protein_BNJ_00118
Kingdom:
euk

Quality

83.8 mean pLDDT

Cluster

View cluster (10 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 92-162
PDB
Domain cluster: rep: tryptophan_repeat_gene_family__YP_008003535__Mythimna_separata_entomopoxvirus_L__1293572__D148-217
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ebbA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.67 57.0 3.96e-01 100.0% 51.1%
2xppA00 1.20.930.10 Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 0.65 55.0 4.54e-01 98.6% 86.1%
2vj4A01 1.10.10.2060 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.63 43.0 4.05e-01 71.8% 73.3%
2d73A02 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.56 44.0 3.05e-01 95.8% 29.1%
1dgfA03 1.20.1370.60 Mainly Alpha › Up-down Bundle › Hemocyanin, N-terminal domain › 0.51 42.0 3.69e-01 97.2% 91.2%
3ivrA00 3.40.50.12780 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain 0.51 43.0 2.75e-01 100.0% 74.1%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4027830 611.3.1.1 ↗ alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Med26 0.61 51.0 3.96e-01 100.0% 72.6%
3930099 611.3.1.1 ↗ alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Med26 0.59 42.0 3.97e-01 74.6% 84.7%
3593755 611.3.1.0 ↗ alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 0.58 46.0 4.06e-01 90.1% 94.5%
4019230 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.56 48.0 3.44e-01 100.0% 84.6%