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hypothetical_protein_BNJ_00132

Euk-Vir

Kaumoebavirus_Viruses.

hypothetical_protein_BNJ_00132__YP_009352544__Kaumoebavirus_Viruses.__X

Identity

Accession:
YP_009352544 ↗
Protein ID:
hypothetical_protein_BNJ_00132
Kingdom:
euk

Quality

70.9 mean pLDDT

Cluster

View cluster (8 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 56-158
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7zs9F01 3.90.940.10 Alpha Beta › Alpha-Beta Complex › Eukaryotic RPB6 RNA polymerase subunit › RNA polymerase subunit, RPB6/omega 0.92 74.0 7.51e-01 91.3% 85.0%
1wgnA00 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.71 27.0 3.42e-01 71.8% 57.1%
2v79A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 28.0 2.71e-01 73.8% 35.7%
2fq3A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 27.0 2.95e-01 77.7% 49.4%
4qbuA02 3.40.366.10 Alpha Beta › 3-Layer(aba) Sandwich › Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 › Malonyl-Coenzyme A Acyl Carrier Protein, domain 2 0.51 37.0 2.87e-01 75.7% 97.9%
1iq0A01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.51 37.0 2.58e-01 77.7% 54.8%
ECOD (13)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3615458 152.1.1.1 ↗ alpha arrays › RPB6/omega subunit-like › RPB6/omega subunit-like › RPB6 › RNA_pol_Rpb6 0.92 75.0 7.83e-01 94.2% 90.5%
5027764 152.1.1.1 ↗ alpha arrays › RPB6/omega subunit-like › RPB6/omega subunit-like › RPB6 › RNA_pol_Rpb6 0.92 58.0 6.84e-01 74.8% 88.0%
1879413 152.1.1.1 ↗ alpha arrays › RPB6/omega subunit-like › RPB6/omega subunit-like › RPB6 › RNA_pol_Rpb6 0.91 69.0 7.60e-01 100.0% 94.2%
4877200 152.1.1.1 ↗ alpha arrays › RPB6/omega subunit-like › RPB6/omega subunit-like › RPB6 › RNA_pol_Rpb6 0.90 75.0 7.35e-01 93.2% 81.7%
3712185 152.1.1.1 ↗ alpha arrays › RPB6/omega subunit-like › RPB6/omega subunit-like › RPB6 › RNA_pol_Rpb6 0.89 62.0 7.27e-01 85.4% 97.3%
4942049 152.1.1.1 ↗ alpha arrays › RPB6/omega subunit-like › RPB6/omega subunit-like › RPB6 › RNA_pol_Rpb6 0.89 61.0 7.16e-01 79.6% 96.0%
4946274 152.1.1.0 ↗ alpha arrays › RPB6/omega subunit-like › RPB6/omega subunit-like › RPB6 0.88 64.0 7.28e-01 83.5% 97.5%
5000320 152.1.1.1 ↗ alpha arrays › RPB6/omega subunit-like › RPB6/omega subunit-like › RPB6 › RNA_pol_Rpb6 0.86 62.0 6.92e-01 80.6% 92.8%
4348670 152.1.2.1 ↗ alpha arrays › RPB6/omega subunit-like › RPB6/omega subunit-like › RNA polymerase omega subunit › RNA_pol_Rpb6 0.83 46.0 4.69e-01 72.8% 57.6%
4091157 152.1.2.1 ↗ alpha arrays › RPB6/omega subunit-like › RPB6/omega subunit-like › RNA polymerase omega subunit › RNA_pol_Rpb6 0.80 48.0 5.25e-01 78.6% 72.9%
3166208 3121.1.1.4 ↗ a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_TamA_1 0.56 26.0 2.92e-01 75.7% 55.0%
4266637 225.1.1.3 ↗ a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c 0.53 28.0 2.38e-01 82.5% 30.3%
4268191 3121.1.1.2 ↗ a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_1 0.51 23.0 2.43e-01 85.4% 41.1%