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hypothetical_protein_BNJ_00159

Euk-Vir

Kaumoebavirus_Viruses.

hypothetical_protein_BNJ_00159__YP_009352571__Kaumoebavirus_Viruses.__X

Identity

Accession:
YP_009352571 ↗
Protein ID:
hypothetical_protein_BNJ_00159
Kingdom:
euk

Quality

73.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-154
PDB
Domain cluster: rep: IMGVR_UViG_3300038312_000168-3300038312-Ga0134836_000233_40918_41553__D2-137
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02732.22 best ERCC4 52.0 1.00e-13 86.9% 99.3%
D2 medium residues 199-328
PDB
Domain cluster: representative
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1bvsA02 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.76 42.0 5.57e-01 84.6% 100.0%
1cukA02 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.74 43.0 5.52e-01 76.2% 100.0%
2ziwB02 1.10.150.670 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Crossover junction endonuclease EME1, DNA-binding domain 0.65 43.0 4.93e-01 96.2% 89.8%
2v57A00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.57 42.0 3.89e-01 78.5% 96.5%
2oerA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.54 40.0 3.66e-01 78.5% 96.1%
2oifB00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.53 39.0 3.78e-01 76.9% 81.5%
2ve3B00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.52 46.0 3.27e-01 99.2% 66.7%
3geeA02 1.20.120.430 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › tRNA modification GTPase MnmE domain 2 0.52 32.0 2.99e-01 97.7% 47.0%
1gcvA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.51 37.0 3.70e-01 76.2% 80.0%
1pkfA00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.51 46.0 3.29e-01 100.0% 65.3%
4ie5A02 1.20.58.1470 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › FTO C-terminal domain 0.51 30.0 3.03e-01 97.7% 53.7%
2jjnA00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.50 44.0 3.22e-01 100.0% 66.8%
ECOD (27)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5060034 102.1.1.27 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.81 41.0 5.49e-01 74.6% 89.0%
None — 0.76 41.0 5.51e-01 75.4% 100.0%
None — 0.76 44.0 5.65e-01 79.2% 100.0%
3908409 102.1.1.27 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.75 44.0 5.64e-01 86.9% 100.0%
None — 0.74 45.0 5.62e-01 100.0% 98.8%
4118903 102.1.1.27 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.74 45.0 5.60e-01 82.3% 98.8%
None — 0.74 45.0 5.39e-01 94.6% 91.8%
4213972 102.1.1.27 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.74 44.0 5.40e-01 96.2% 91.8%
4608590 102.1.1.27 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.74 46.0 5.62e-01 92.3% 96.5%
3748615 102.5.1.9 ↗ alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins › DUF7898 0.74 44.0 5.38e-01 88.5% 91.8%
3531383 102.5.1.1 ↗ alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins › HHH_5 0.73 44.0 5.37e-01 88.5% 91.8%
None — 0.72 42.0 5.35e-01 99.2% 98.7%
None — 0.71 42.0 5.25e-01 79.2% 100.0%
None — 0.70 42.0 5.23e-01 78.5% 96.2%
None — 0.70 42.0 5.26e-01 82.3% 97.5%
4052361 102.1.1.27 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.70 45.0 5.47e-01 95.4% 100.0%
None — 0.70 45.0 5.47e-01 85.4% 100.0%
3990326 102.1.1.0 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.69 45.0 5.13e-01 96.2% 87.0%
4178093 102.1.1.27 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.68 38.0 4.93e-01 78.5% 100.0%
4110087 102.1.1.79 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD+HHH_2+HHH_5 0.67 60.0 5.38e-01 100.0% 74.6%
4204484 102.1.1.81 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2+HHH_5 0.65 60.0 5.40e-01 100.0% 77.1%
4321047 102.1.1.27 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.65 59.0 5.35e-01 100.0% 77.6%
4122857 102.1.1.79 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD+HHH_2+HHH_5 0.65 58.0 5.36e-01 100.0% 85.3%
3334874 2004.1.1.195 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C 0.60 38.0 2.73e-01 95.4% 21.8%
167791 149.1.1.1 ↗ alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 0.53 47.0 3.33e-01 99.2% 67.1%
3742369 592.2.1.0 ↗ alpha arrays › PWI domain-like › YugE-like › YugE-like 0.53 29.0 3.71e-01 100.0% 97.1%
3313085 149.1.1.1 ↗ alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 0.53 43.0 3.11e-01 87.7% 76.4%