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hypothetical_protein_BNJ_00196

Euk-Vir

Kaumoebavirus_Viruses.

hypothetical_protein_BNJ_00196__YP_009352607__Kaumoebavirus_Viruses.__X

Identity

Accession:
YP_009352607 ↗
Protein ID:
hypothetical_protein_BNJ_00196
Kingdom:
euk

Quality

44.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 25-115
PDB
Domain cluster: rep: NC_027299.1__YP_009146220.1__SUFP_046__00046__D4-101
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4llgM00 3.10.20.510 Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNA polymerase inhibitor 0.67 37.0 4.72e-01 97.8% 98.0%
2yz0A00 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.62 44.0 3.85e-01 100.0% 49.3%
2ebmA00 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.62 44.0 3.95e-01 100.0% 53.1%
1gccA00 3.30.730.10 Alpha Beta › 2-Layer Sandwich › GCC-box Binding Domain › AP2/ERF domain 0.61 33.0 3.88e-01 97.8% 76.2%
8d8lE01 3.30.230.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.56 31.0 3.17e-01 100.0% 54.7%
3oqcA02 3.90.70.130 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.52 37.0 2.84e-01 73.6% 84.0%
ECOD (16)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3597677 821.1.1.0 ↗ a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease 0.88 83.0 7.87e-01 100.0% 93.3%
3613416 821.1.1.3 ↗ a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › T5orf172 0.88 83.0 7.43e-01 100.0% 81.7%
3989300 821.1.1.3 ↗ a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › T5orf172 0.84 77.0 7.14e-01 97.8% 95.5%
4016088 821.1.1.3 ↗ a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › T5orf172 0.81 74.0 7.05e-01 98.9% 99.0%
3735748 821.1.1.3 ↗ a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › T5orf172 0.80 73.0 5.88e-01 100.0% 62.4%
4994096 821.1.1.0 ↗ a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease 0.63 45.0 4.36e-01 75.8% 68.3%
3723442 216.1.1.4 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › RWD 0.63 46.0 4.05e-01 100.0% 53.1%
165197 216.1.1.4 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › RWD 0.62 44.0 3.95e-01 100.0% 53.1%
3786990 216.1.1.4 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › RWD 0.62 44.0 3.93e-01 100.0% 52.3%
3552620 216.1.1.4 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › RWD 0.61 44.0 4.01e-01 100.0% 56.7%
3885877 11.1.6.5 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › UPA domain › UPA-FIIND 0.61 52.0 4.70e-01 96.7% 81.5%
3649276 887.1.1.0 ↗ a+b two layers › Ribosomal protein L30p/L7e › Ribosomal protein L30p/L7e › Ribosomal protein L30p/L7e 0.55 42.0 3.91e-01 83.5% 100.0%
3788003 220.1.1.112 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_10 0.54 34.0 2.92e-01 98.9% 39.3%
4932736 4955.1.1.0 ↗ a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit 0.54 39.0 4.23e-01 97.8% 96.0%
5050902 220.1.1.76 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_2 0.52 38.0 3.41e-01 100.0% 55.2%
1489343 330.10.1.1 ↗ a+b two layers › dsRBD-like › Heterocyclase TruD C-terminal domain › Heterocyclase TruD C-terminal domain › YcaO 0.52 35.0 3.53e-01 100.0% 69.2%