←Back to structures
hypothetical_protein_BNJ_00236
Euk-VirKaumoebavirus_Viruses.
hypothetical_protein_BNJ_00236__YP_009352645__Kaumoebavirus_Viruses.__X
Identity
- Accession:
- YP_009352645 ↗
- Protein ID:
- hypothetical_protein_BNJ_00236
- Kingdom:
- euk
Quality
74.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-74_93-123
Domain cluster:
rep: putative_rifampin_resistance_protein__YP_009112814__Parapoxvirus_red_deer_HL953__1579460__D62-159_196-218
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF16903.13 best | Capsid_N | 26.8 | 5.20e-06 | 100.0% | 47.8% |
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5tipA01 | 2.70.9.10 | Mainly Beta › Distorted Sandwich › Adenovirus Type 2 Hexon; domain 4 › Adenovirus Type 2 Hexon, domain 4 | 0.86 | 71.0 | 5.65e-01 | 100.0% | 47.3% |
| 2vvfA01 | 2.60.120.730 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 38.0 | 3.46e-01 | 100.0% | 49.6% |
| 2o16B00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.58 | 30.0 | 2.74e-01 | 97.1% | 37.8% |
| 3fhmA00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.56 | 31.0 | 2.81e-01 | 96.2% | 39.7% |
| 3kh5A02 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.55 | 34.0 | 3.18e-01 | 97.1% | 47.1% |
| 2rc3C00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.55 | 30.0 | 2.81e-01 | 96.2% | 41.4% |
| 2yziB00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.55 | 30.0 | 2.73e-01 | 96.2% | 39.3% |
| 1pbjA00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.54 | 28.0 | 2.72e-01 | 97.1% | 42.0% |
| 3ctuA00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.52 | 30.0 | 2.74e-01 | 97.1% | 39.3% |
| 3jtfA02 | 3.90.1280.20 | Alpha Beta › Alpha-Beta Complex › CBS domain Like › | 0.51 | 24.0 | 3.01e-01 | 95.2% | 72.6% |
| 5aweA01 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.51 | 30.0 | 2.91e-01 | 97.1% | 49.6% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4850052 | 10.2.1.54 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Capsid_N | 0.87 | 76.0 | 5.90e-01 | 100.0% | 46.8% |
| 2995054 | 10.2.1.54 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Capsid_N | 0.86 | 71.0 | 5.39e-01 | 100.0% | 41.0% |
| 4863940 | 10.2.1.54 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Capsid_N | 0.85 | 59.0 | 5.15e-01 | 75.0% | 50.7% |
| 2995198 | 10.2.1.54 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Capsid_N | 0.85 | 70.0 | 5.59e-01 | 100.0% | 47.4% |
| 2841750 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.84 | 62.0 | 5.07e-01 | 76.0% | 73.0% |
| 4830370 | 10.2.1.54 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Capsid_N | 0.81 | 76.0 | 5.68e-01 | 100.0% | 46.4% |
| 4883559 | 10.2.1.33 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Pox_Rif | 0.79 | 71.0 | 5.47e-01 | 100.0% | 46.7% |
| 2389747 | 10.2.1.33 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Pox_Rif | 0.79 | 70.0 | 5.38e-01 | 100.0% | 45.0% |
| 2497010 | 10.2.1.54 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Capsid_N | 0.77 | 71.0 | 5.41e-01 | 100.0% | 50.9% |
| 3242830 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.71 | 65.0 | 5.00e-01 | 100.0% | 54.7% |
| 5030071 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.58 | 32.0 | 3.11e-01 | 97.1% | 46.7% |
| 4985164 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.56 | 33.0 | 3.06e-01 | 97.1% | 45.0% |
| 5039495 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.56 | 31.0 | 2.88e-01 | 97.1% | 40.7% |
| 5007425 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.56 | 35.0 | 3.20e-01 | 98.1% | 46.4% |
| 5057485 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.54 | 33.0 | 2.99e-01 | 96.2% | 43.9% |
| 4966973 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.54 | 29.0 | 2.78e-01 | 97.1% | 41.4% |
| 7273 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.54 | 28.0 | 2.71e-01 | 97.1% | 41.7% |
| 5025339 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.52 | 26.0 | 2.55e-01 | 96.2% | 39.2% |