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hypothetical_protein_BNJ_00274

Euk-Vir

Kaumoebavirus_Viruses.

hypothetical_protein_BNJ_00274__YP_009352678__Kaumoebavirus_Viruses.__X

Identity

Accession:
YP_009352678 ↗
Protein ID:
hypothetical_protein_BNJ_00274
Kingdom:
euk

Quality

71.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-57
PDB
Domain cluster: representative
CATH (45)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1txuA01 1.10.246.120 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › 0.80 55.0 4.57e-01 75.9% 41.5%
2vm6A00 1.10.437.10 Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like 0.71 49.0 3.67e-01 75.9% 27.8%
3tl4X02 1.10.10.2420 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.70 47.0 4.34e-01 70.4% 55.6%
2hh6A00 1.10.1900.10 Mainly Alpha › Orthogonal Bundle › c-terminal domain of poly(a) binding protein › c-terminal domain of poly(a) binding protein 0.68 58.0 4.69e-01 100.0% 55.0%
1lp1A00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.68 51.0 5.08e-01 100.0% 83.6%
2qqyA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.68 47.0 3.45e-01 72.2% 60.9%
2qgsB01 1.10.472.50 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › HD-domain/PDEase-like 0.67 56.0 4.93e-01 100.0% 68.2%
1q5nA03 1.10.40.30 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) 0.67 56.0 4.96e-01 100.0% 64.2%
3qxyA02 3.90.1420.10 Alpha Beta › Alpha-Beta Complex › set domain protein methyltransferase, domain 2 › Rubisco LSMT, substrate-binding domain 0.67 55.0 3.94e-01 94.4% 55.1%
2g47A03 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.66 44.0 2.92e-01 70.4% 21.1%
4yozA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.66 50.0 3.55e-01 87.0% 36.7%
1k32A03 3.30.750.44 Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › 0.65 54.0 5.07e-01 100.0% 91.7%
3ripA02 1.20.120.1900 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Gamma-tubulin complex, C-terminal domain 0.65 55.0 3.56e-01 100.0% 70.3%
2lt3A01 1.20.58.1290 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › CarD-like, C-terminal domain 0.65 45.0 3.72e-01 74.1% 42.0%
5b00A00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.65 54.0 3.56e-01 98.1% 53.6%
4gmqA00 1.10.8.840 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ribosome-associated complex head domain 0.64 54.0 4.65e-01 98.1% 93.5%
2pjqA01 1.10.472.50 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › HD-domain/PDEase-like 0.64 53.0 4.65e-01 100.0% 65.2%
1e1dA02 1.20.1270.20 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.63 54.0 4.76e-01 100.0% 73.8%
3mzoB00 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.63 44.0 2.99e-01 75.9% 23.8%
3s64A00 1.10.225.10 Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like 0.62 48.0 4.33e-01 88.9% 69.1%
2yi9A05 1.20.1270.270 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › VP1, C-terminal extension domain 0.62 46.0 4.29e-01 100.0% 62.3%
3aq1B02 3.30.260.10 Alpha Beta › 2-Layer Sandwich › GROEL; domain 2 › TCP-1-like chaperonin intermediate domain 0.61 51.0 4.20e-01 100.0% 91.8%
3qwuA03 3.30.70.2160 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 41.0 3.17e-01 72.2% 30.9%
4lwsA00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.61 43.0 3.50e-01 75.9% 89.0%
3f4sA02 1.10.40.80 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › 0.61 49.0 4.78e-01 100.0% 82.8%
1lrzA03 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.61 43.0 4.17e-01 75.9% 83.9%
2k85A00 1.10.10.440 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain 0.60 42.0 3.96e-01 72.2% 78.5%
3c24A02 1.10.3640.10 Mainly Alpha › Orthogonal Bundle › putative oxidoreductase fold › Semialdehyde dehydrogenase-like, C-terminal 0.60 48.0 4.00e-01 92.6% 61.0%
2xgcA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.60 47.0 3.62e-01 88.9% 76.6%
3solA00 1.20.58.1630 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Chaperone lipoprotein PulS/OutS 0.59 49.0 4.24e-01 98.1% 76.9%
1x4tA01 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.58 41.0 4.05e-01 74.1% 72.4%
3nbiA01 1.10.8.1020 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › RecQ-mediated genome instability protein 1, N-terminal domain 0.58 47.0 4.69e-01 98.1% 89.7%
3egoA02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.58 48.0 3.85e-01 100.0% 90.9%
1j09A04 1.10.8.70 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1 0.58 43.0 4.48e-01 100.0% 93.8%
3axjB02 1.20.58.200 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 0.57 41.0 3.52e-01 75.9% 60.0%
4m0mA03 1.20.1270.430 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.57 47.0 4.27e-01 100.0% 74.7%
2kjgA00 1.20.120.970 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.56 49.0 4.05e-01 100.0% 63.6%
2hwjA02 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.55 45.0 4.36e-01 92.6% 91.8%
1lq7A00 1.20.1270.70 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Designed single chain three-helix bundle 0.55 44.0 4.25e-01 100.0% 91.0%
2o5rA04 1.10.8.70 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1 0.55 43.0 4.46e-01 98.1% 100.0%
1z72A00 1.20.910.10 Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like 0.54 48.0 3.21e-01 100.0% 60.2%
2zxqA06 1.20.1270.70 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Designed single chain three-helix bundle 0.54 44.0 4.26e-01 100.0% 83.3%
2qs7A00 3.40.1260.10 Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical Protein Ychn; Chain: A, › DsrEFH-like 0.54 42.0 3.16e-01 85.2% 96.4%
2g80A02 1.10.720.60 Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › 0.52 39.0 3.65e-01 92.6% 76.9%
2r18A02 1.10.8.880 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Birnavirus VP3 protein, domain 2 0.51 40.0 4.00e-01 100.0% 88.1%
ECOD (60)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4153338 101.1.2.567 alpha arrays › HTH › HTH › winged helix domain › DUF222 0.85 72.0 5.09e-01 100.0% 32.3%
3993765 627.1.1.0 alpha complex topology › VPS9 domain › VPS9 domain › VPS9 domain 0.79 58.0 4.96e-01 77.8% 49.4%
3233936 627.1.1.2 alpha complex topology › VPS9 domain › VPS9 domain › VPS9 domain › DUF5601 0.77 56.0 4.57e-01 75.9% 45.3%
3634926 103.4.1.0 alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein 0.76 66.0 6.14e-01 100.0% 85.7%
3952621 101.35.1.0 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX 0.73 49.0 4.56e-01 75.9% 55.1%
4991136 4009.1.1.0 alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins 0.73 64.0 6.20e-01 100.0% 96.7%
3185258 103.4.1.0 alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein 0.73 62.0 5.35e-01 100.0% 65.6%
3817553 3684.1.1.49 alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PF30094 0.72 62.0 5.08e-01 100.0% 59.0%
3822810 1128.1.1.13 alpha bundles › LYR protein › LYR protein › LYR protein › PF30094 0.72 62.0 5.13e-01 100.0% 62.0%
3597591 1128.1.1.0 alpha bundles › LYR protein › LYR protein › LYR protein 0.72 60.0 5.61e-01 100.0% 82.9%
3017495 1128.1.1.2 alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR_2 0.71 61.0 4.84e-01 100.0% 56.5%
3814488 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.71 58.0 4.68e-01 92.6% 70.0%
5058390 610.3.1.1 alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey 0.71 61.0 4.28e-01 98.1% 30.5%
3533312 1128.1.1.1 alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR 0.71 60.0 5.39e-01 100.0% 73.1%
56928 191.1.1.0 alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain 0.70 58.0 4.57e-01 94.4% 91.3%
4506346 103.1.1.6 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › RuvA_C 0.69 55.0 5.73e-01 98.1% 98.0%
3538309 1128.1.1.1 alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR 0.69 59.0 5.25e-01 100.0% 77.5%
4423693 103.1.1.6 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › RuvA_C 0.68 52.0 5.24e-01 96.3% 85.5%
4983650 5065.1.1.3 alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › BPD_transp_2 0.67 59.0 3.85e-01 100.0% 32.5%
3659606 3361.1.1.5 alpha bundles › C-terminal Pdr1-activating domain of J-protein Zuo1 › C-terminal Pdr1-activating domain of J-protein Zuo1 › C-terminal Pdr1-activating domain of J-protein Zuo1 › PF28983 0.66 55.0 4.44e-01 98.1% 68.7%
4939455 103.1.1.6 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › RuvA_C 0.66 51.0 4.96e-01 98.1% 78.3%
3923696 198.1.1.0 alpha arrays › Saposin-like › Saposin-like › Saposin-like 0.65 47.0 4.09e-01 81.5% 47.8%
3738479 1128.1.1.1 alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR 0.65 52.0 4.73e-01 100.0% 69.4%
3695657 109.4.1.17 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Cullin 0.64 43.0 3.34e-01 70.4% 34.4%
5048820 2488.1.1.1 a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › SpoU_methylase 0.64 53.0 3.54e-01 100.0% 23.1%
5061725 632.23.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Helical linker domain in nicking endonuclease N.BspD6I › Helical linker domain in nicking endonuclease N.BspD6I 0.64 54.0 4.84e-01 100.0% 68.8%
5074726 633.10.1.0 alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like 0.64 52.0 4.64e-01 100.0% 65.9%
3479812 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.64 44.0 3.68e-01 72.2% 45.3%
4809777 6004.1.1.2 extended segments › FATC domain › FATC domain › FATC domain › ETC_C1_NDUFA5 0.64 53.0 4.38e-01 100.0% 63.3%
4981741 632.11.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like 0.63 51.0 5.01e-01 94.4% 85.0%
3353067 101.1.2.37 alpha arrays › HTH › HTH › winged helix domain › E2F_TDP 0.63 45.0 4.08e-01 81.5% 53.8%
4053752 103.1.1.6 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › RuvA_C 0.63 48.0 4.75e-01 100.0% 80.0%
4936324 4049.1.1.0 alpha superhelices › alpha-helical domain in siroheme synthase middle domains-like › alpha-helical domain in siroheme synthase middle domains-like › alpha-helical domain in siroheme synthase middle domains-like 0.63 52.0 5.20e-01 98.1% 98.2%
4602904 6091.1.1.0 alpha bundles › Helical bundle domain in Endo-alpha-N-acetylgalactosaminidase › Helical bundle domain in Endo-alpha-N-acetylgalactosaminidase › Helical bundle domain in Endo-alpha-N-acetylgalactosaminidase 0.62 51.0 4.52e-01 100.0% 76.5%
3955184 3831.1.1.1 alpha bundles › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › LprI 0.61 48.0 4.26e-01 90.7% 64.7%
None 0.61 44.0 2.68e-01 77.8% 11.9%
4179237 6028.1.1.0 alpha bundles › Ribosome modulation factor › Ribosome modulation factor › Ribosome modulation factor 0.60 41.0 3.93e-01 75.9% 60.0%
4951532 7000.1.1.0 alpha arrays › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS 0.60 46.0 4.52e-01 88.9% 78.3%
5019807 101.1.2.894 alpha arrays › HTH › HTH › winged helix domain › DUF2240 0.60 48.0 3.65e-01 94.4% 35.9%
3172018 109.4.1.17 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Cullin 0.60 41.0 3.52e-01 72.2% 43.2%
5068187 632.11.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like 0.60 50.0 4.61e-01 100.0% 79.7%
5068968 632.22.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats 0.60 49.0 4.62e-01 100.0% 77.1%
5059485 7076.1.1.0 0.59 46.0 4.67e-01 94.4% 92.7%
4995419 592.2.1.0 alpha arrays › PWI domain-like › YugE-like › YugE-like 0.59 49.0 4.34e-01 100.0% 83.5%
5061323 632.11.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like 0.58 47.0 4.59e-01 100.0% 84.6%
169070 129.1.1.11 alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › ApbA_C 0.58 48.0 3.85e-01 100.0% 90.9%
4212920 3651.1.1.1 alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › IF-2B 0.57 47.0 3.62e-01 96.3% 38.5%
3384514 604.15.1.0 alpha bundles › Spectrin repeat-like › Efb C-domain-like › Efb C-domain-like 0.57 39.0 3.55e-01 77.8% 52.0%
4977812 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.57 43.0 2.87e-01 81.5% 86.2%
4948166 103.12.1.0 alpha arrays › RuvA-C › ANTAR domain › ANTAR domain 0.57 44.0 4.45e-01 98.1% 92.7%
3724838 192.7.1.0 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm 0.57 49.0 4.55e-01 100.0% 91.4%
136703 3808.1.1.1 alpha arrays › Archaeal protein SSO6904 › Archaeal protein SSO6904 › Archaeal protein SSO6904 › Ca_bind_SSO6904 0.56 49.0 4.05e-01 100.0% 63.6%
3740688 7076.1.1.0 0.56 45.0 4.23e-01 100.0% 77.3%
3430243 632.7.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain 0.56 45.0 4.14e-01 100.0% 67.5%
3913391 108.1.1.12 alpha arrays › EF-hand › EF-hand-related › EF-hand › p25-alpha 0.55 39.0 3.75e-01 87.0% 64.6%
392120 131.1.1.9 alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › YfbR-like 0.55 48.0 3.27e-01 100.0% 68.2%
3593935 601.3.1.0 alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain 0.53 45.0 3.45e-01 100.0% 40.7%
3603989 103.12.1.0 alpha arrays › RuvA-C › ANTAR domain › ANTAR domain 0.53 39.0 4.02e-01 96.3% 100.0%
5039924 101.1.2.894 alpha arrays › HTH › HTH › winged helix domain › DUF2240 0.52 39.0 3.00e-01 85.2% 35.2%
4927779 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.51 37.0 2.49e-01 83.3% 60.4%