←Back to structures
hypothetical_protein_BZK12_gp005
Euk-VirLymphocystis_disease_virus_Sa
hypothetical_protein_BZK12_gp005__YP_009342073__Lymphocystis_disease_virus_Sa__1898060
Identity
- Accession:
- YP_009342073 ↗
- Protein ID:
- hypothetical_protein_BZK12_gp005
- Kingdom:
- euk
Quality
57.8
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Pimascovirales›
Iridoviridae›
Lymphocystivirus›
Lymphocystis_disease_virus_Sa
TaxID: 1898060
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 167-293
Domain cluster:
rep: core_protein_20__YP_010088018__Lymphocystis_disease_virus_4__2704413__D170-292
D2
high
residues 297-413
Domain cluster:
rep: hypothetical_protein_MIMI_gp0490__YP_003986963__Acanthamoeba_polyphaga_mimivirus__212035__D30-141
CATH (38)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2mj7A00 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.71 | 55.0 | 5.19e-01 | 91.5% | 68.1% |
| 7szeB02 | 3.90.380.10 | Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 | 0.65 | 60.0 | 5.12e-01 | 100.0% | 89.1% |
| 1kdgA02 | 3.30.410.10 | Alpha Beta › 2-Layer Sandwich › Cholesterol Oxidase; domain 2 › Cholesterol Oxidase; domain 2 | 0.65 | 53.0 | 4.36e-01 | 86.3% | 80.4% |
| 2jbvA04 | 3.30.410.40 | Alpha Beta › 2-Layer Sandwich › Cholesterol Oxidase; domain 2 › | 0.64 | 52.0 | 4.62e-01 | 88.9% | 79.9% |
| 5oc1A02 | 3.30.560.10 | Alpha Beta › 2-Layer Sandwich › Glucose Oxidase; domain 3 › Glucose Oxidase, domain 3 | 0.63 | 51.0 | 3.78e-01 | 88.0% | 67.1% |
| 6v04A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.63 | 54.0 | 5.25e-01 | 94.0% | 100.0% |
| 1xszA03 | 3.30.310.140 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › sec7 domains | 0.62 | 50.0 | 4.59e-01 | 87.2% | 73.9% |
| 3qszA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.62 | 51.0 | 4.52e-01 | 91.5% | 85.3% |
| 2d4rA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.61 | 53.0 | 4.96e-01 | 96.6% | 99.3% |
| 2vfrA04 | 3.30.70.2520 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 41.0 | 4.46e-01 | 89.7% | 86.2% |
| 4bbyB04 | 3.30.70.3450 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 42.0 | 4.46e-01 | 90.6% | 80.8% |
| 2rrnA01 | 3.30.70.2040 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 36.0 | 4.18e-01 | 88.0% | 84.3% |
| 8es5A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.60 | 51.0 | 4.87e-01 | 94.0% | 93.5% |
| 3oh8A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.59 | 53.0 | 4.99e-01 | 99.1% | 99.3% |
| 2hzmB00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.56 | 46.0 | 3.74e-01 | 89.7% | 87.2% |
| 7emfR01 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.56 | 45.0 | 3.92e-01 | 85.5% | 98.9% |
| 4l3nA01 | 3.30.70.1840 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Spike protein, C-terminal core receptor binding subdomain | 0.56 | 34.0 | 3.20e-01 | 73.5% | 48.6% |
| 1f46B00 | 3.30.1400.10 | Alpha Beta › 2-Layer Sandwich › Cell Division Protein Zipa; Chain: A, › ZipA, C-terminal FtsZ-binding domain | 0.56 | 46.0 | 4.37e-01 | 93.2% | 75.0% |
| 2lf2A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.55 | 49.0 | 4.32e-01 | 100.0% | 87.4% |
| 1t17A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.55 | 49.0 | 4.60e-01 | 100.0% | 99.3% |
| 1uuzB00 | 3.40.1420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Inhibitor of vertebrate lysozyme | 0.55 | 40.0 | 3.94e-01 | 82.9% | 70.3% |
| 1qwyA02 | 2.70.70.10 | Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) | 0.55 | 42.0 | 3.69e-01 | 81.2% | 60.5% |
| 1mwqA00 | 3.30.70.1060 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel | 0.55 | 38.0 | 4.06e-01 | 90.6% | 83.0% |
| 3ramA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 44.0 | 4.42e-01 | 93.2% | 84.7% |
| 1rtzA00 | 3.30.70.560 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK | 0.54 | 37.0 | 3.41e-01 | 90.6% | 53.3% |
| 4itxA02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.53 | 38.0 | 3.60e-01 | 90.6% | 62.8% |
| 4nkbA01 | 3.30.1120.120 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.53 | 45.0 | 4.59e-01 | 92.3% | 99.1% |
| 3fw9A03 | 3.40.462.20 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › | 0.53 | 39.0 | 3.43e-01 | 89.7% | 50.5% |
| 1cg2A02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 40.0 | 4.16e-01 | 93.2% | 86.4% |
| 3bf4A01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 37.0 | 4.00e-01 | 93.2% | 88.9% |
| 3bn7A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 37.0 | 3.96e-01 | 92.3% | 86.3% |
| 2v8hA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 41.0 | 4.17e-01 | 94.0% | 87.1% |
| 4g3vA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.51 | 39.0 | 3.54e-01 | 82.1% | 93.2% |
| 2eabB01 | 2.70.98.50 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › putative glycoside hydrolase family protein from bacillus halodurans | 0.51 | 41.0 | 3.22e-01 | 87.2% | 41.5% |
| 3n5fA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 41.0 | 4.15e-01 | 93.2% | 88.6% |
| 8c46A01 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 41.0 | 4.20e-01 | 94.0% | 90.4% |
| 1fnoA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 39.0 | 4.02e-01 | 92.3% | 87.3% |
| 5uejA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 40.0 | 4.11e-01 | 90.6% | 87.7% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5041579 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.66 | 55.0 | 5.78e-01 | 93.2% | 99.0% |
| 4997740 | 331.9.1.0 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain | 0.64 | 56.0 | 5.24e-01 | 93.2% | 81.4% |
| 3695778 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.64 | 54.0 | 5.02e-01 | 90.6% | 97.2% |
| 3993872 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.63 | 58.0 | 4.88e-01 | 100.0% | 73.2% |
| 3729448 | 868.1.1.10 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › DUF7905 | 0.63 | 53.0 | 3.75e-01 | 91.5% | 77.1% |
| 3227579 | 331.3.1.6 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PRELI | 0.62 | 56.0 | 4.84e-01 | 99.1% | 97.2% |
| 4974181 | 331.3.1.74 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PF27226 | 0.61 | 41.0 | 4.41e-01 | 76.1% | 80.8% |
| 3701881 | 304.25.1.0 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain | 0.61 | 53.0 | 4.49e-01 | 94.0% | 67.9% |
| 4010883 | 331.3.1.10 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AtaL | 0.60 | 53.0 | 4.73e-01 | 99.1% | 98.2% |
| 4996916 | 868.1.1.1 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH | 0.59 | 48.0 | 4.00e-01 | 87.2% | 87.3% |
| 5074212 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.59 | 50.0 | 5.18e-01 | 93.2% | 100.0% |
| 2985481 | 3800.1.1.1 ↗ | a+b two layers › Virion infectivity factor Vif › Virion infectivity factor Vif › Virion infectivity factor Vif › Vif | 0.59 | 47.0 | 4.15e-01 | 87.2% | 93.2% |
| 3257317 | 331.3.1.31 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF1990 | 0.59 | 50.0 | 4.15e-01 | 93.2% | 82.9% |
| 4970968 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.58 | 50.0 | 5.13e-01 | 96.6% | 98.2% |
| 5020330 | 868.1.1.1 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH | 0.58 | 49.0 | 4.05e-01 | 90.6% | 90.2% |
| 3403106 | 331.3.1.5 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc | 0.58 | 51.0 | 4.55e-01 | 96.6% | 89.1% |
| 5005014 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.58 | 47.0 | 3.81e-01 | 88.0% | 90.0% |
| 3495172 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.58 | 41.0 | 3.67e-01 | 73.5% | 77.0% |
| 3552839 | 11.1.1.795 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › FANCAA | 0.57 | 48.0 | 4.91e-01 | 91.5% | 100.0% |
| 3196755 | 868.1.1.2 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA_triPase | 0.57 | 47.0 | 3.50e-01 | 90.6% | 83.9% |
| 3896233 | 331.3.1.72 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › FANCAA | 0.57 | 47.0 | 4.90e-01 | 91.5% | 97.3% |
| 3691461 | 868.1.1.3 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › Med20 | 0.57 | 47.0 | 3.67e-01 | 90.6% | 81.2% |
| 5035204 | 241.1.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone | 0.56 | 48.0 | 4.27e-01 | 94.0% | 64.5% |
| 3432828 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.56 | 51.0 | 3.61e-01 | 99.1% | 41.7% |
| 4976692 | 844.1.1.0 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain | 0.56 | 50.0 | 3.94e-01 | 98.3% | 91.8% |
| 3276405 | 246.3.1.0 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like | 0.55 | 41.0 | 3.20e-01 | 79.5% | 80.4% |
| 3809725 | 304.107.1.8 ↗ | a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain › AAA_assoc | 0.55 | 49.0 | 4.72e-01 | 96.6% | 97.7% |
| 4139591 | 223.2.1.32 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_2 | 0.55 | 44.0 | 4.00e-01 | 85.5% | 88.7% |
| 4025469 | 868.1.1.0 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related | 0.55 | 47.0 | 3.83e-01 | 92.3% | 93.0% |
| 4524884 | 868.1.1.2 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA_triPase | 0.55 | 47.0 | 3.55e-01 | 96.6% | 78.4% |
| 3059233 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.55 | 45.0 | 4.08e-01 | 89.7% | 100.0% |
| 3679340 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.54 | 41.0 | 4.24e-01 | 80.3% | 87.3% |
| 3189301 | 304.25.1.0 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain | 0.54 | 44.0 | 4.51e-01 | 93.2% | 91.8% |
| 4984977 | 304.48.1.32 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › TiaS-FLD | 0.54 | 37.0 | 3.40e-01 | 90.6% | 53.5% |
| 3495780 | 304.107.1.5 ↗ | a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain › BCS1_N | 0.54 | 45.0 | 4.11e-01 | 91.5% | 80.6% |
| 3717061 | 304.107.1.5 ↗ | a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain › BCS1_N | 0.53 | 43.0 | 4.42e-01 | 94.0% | 89.6% |
| 5053192 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.52 | 41.0 | 3.96e-01 | 83.8% | 98.5% |
| 3737773 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.52 | 41.0 | 3.66e-01 | 83.8% | 92.1% |
| 3965161 | 304.6.1.1 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › FAD-oxidase_C | 0.51 | 44.0 | 3.41e-01 | 95.7% | 52.7% |
D3
high
residues 443-536
Domain cluster:
rep: orf2-like_protein__YP_031619__Frog_virus_3__10493__D475-551
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF19061.6 best | DUF5757 | 108.5 | 2.30e-31 | 91.5% | 96.9% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wduB00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.51 | 37.0 | 2.95e-01 | 77.7% | 96.3% |
D4
high
residues 554-736
D5
medium
residues 1-65
D6
medium
residues 769-845