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hypothetical_protein_BZK12_gp016
Euk-VirLymphocystis_disease_virus_Sa
hypothetical_protein_BZK12_gp016__YP_009342084__Lymphocystis_disease_virus_Sa__1898060
Identity
- Accession:
- YP_009342084 ↗
- Protein ID:
- hypothetical_protein_BZK12_gp016
- Kingdom:
- euk
Quality
70.2
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Pimascovirales›
Iridoviridae›
Lymphocystivirus›
Lymphocystis_disease_virus_Sa
TaxID: 1898060
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 132-184
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00096.33 best | zf-C2H2 | 18.6 | 2.80e-03 | 43.4% | 100.0% |
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6kxdA01 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.58 | 42.0 | 2.76e-01 | 79.2% | 73.2% |
| 5k5iA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.56 | 49.0 | 4.98e-01 | 100.0% | 100.0% |
| 2gwcA00 | 3.30.590.20 | Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › | 0.55 | 46.0 | 2.81e-01 | 100.0% | 87.2% |
| 3e9lA02 | 1.20.80.40 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › Prp8 RNase H domain, fingers region | 0.54 | 40.0 | 3.36e-01 | 81.1% | 72.6% |
| 1vk8A00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 39.0 | 3.34e-01 | 83.0% | 82.8% |
| 3hcsA02 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.51 | 38.0 | 3.91e-01 | 81.1% | 82.7% |
| 4l3uA00 | 1.20.1480.40 | Mainly Alpha › Up-down Bundle › hypothetical protein mp506/mpn330, domain 1 › Uncharacterised protein PF16133, DUF4844 | 0.51 | 41.0 | 3.23e-01 | 94.3% | 77.2% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| None | — | 0.77 | 53.0 | 6.02e-01 | 73.6% | 95.0% | |
| 3795043 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.76 | 60.0 | 6.01e-01 | 92.5% | 84.9% |
| 3795045 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.74 | 58.0 | 5.73e-01 | 92.5% | 81.8% |
| 3246989 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.73 | 57.0 | 5.65e-01 | 92.5% | 81.8% |
| 3405838 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.71 | 50.0 | 4.29e-01 | 86.8% | 48.8% |
| 3530650 | 386.1.1.133 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2+zf-C2H2_4 | 0.71 | 49.0 | 4.68e-01 | 79.2% | 63.3% |
| 3886235 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.69 | 47.0 | 3.88e-01 | 79.2% | 43.5% |
| 3398730 | 386.1.1.133 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2+zf-C2H2_4 | 0.67 | 47.0 | 3.79e-01 | 77.4% | 41.1% |
| None | — | 0.66 | 44.0 | 4.36e-01 | 77.4% | 67.3% | |
| 3937492 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.65 | 48.0 | 3.84e-01 | 84.9% | 40.0% |
| 3800062 | 386.1.1.246 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › PF30355 | 0.65 | 50.0 | 5.19e-01 | 83.0% | 100.0% |
| 3566753 | 386.1.1.238 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2, zf-C2H2_6 | 0.64 | 48.0 | 4.23e-01 | 79.2% | 72.0% |
| 3542649 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.64 | 51.0 | 4.29e-01 | 100.0% | 50.5% |
| 3236734 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.62 | 49.0 | 4.70e-01 | 83.0% | 81.7% |
| 3525031 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.62 | 49.0 | 4.87e-01 | 100.0% | 89.1% |
| 3414287 | 386.1.1.312 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-met, zf-C2H2_4 | 0.62 | 51.0 | 4.80e-01 | 90.6% | 80.0% |
| 3396588 | 386.1.1.238 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2, zf-C2H2_6 | 0.61 | 45.0 | 4.51e-01 | 77.4% | 78.2% |
| 3580152 | 386.1.1.24 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_4 | 0.61 | 50.0 | 5.16e-01 | 92.5% | 96.0% |
| 3105363 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.60 | 44.0 | 4.20e-01 | 77.4% | 66.1% |
| 3743699 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.59 | 47.0 | 3.92e-01 | 86.8% | 90.0% |
| 3194248 | 386.1.1.305 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_6, zf-C2H2_15 | 0.58 | 46.0 | 3.52e-01 | 86.8% | 84.2% |
| 3221969 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.57 | 48.0 | 4.37e-01 | 100.0% | 80.0% |
| 3777923 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.57 | 51.0 | 3.83e-01 | 100.0% | 44.8% |
| 3859468 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.53 | 42.0 | 3.76e-01 | 98.1% | 60.0% |
| 3762095 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.52 | 45.0 | 3.83e-01 | 100.0% | 85.6% |
| 3389730 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.51 | 43.0 | 4.16e-01 | 90.6% | 100.0% |
| 3996858 | 2485.1.1.1 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin | 0.51 | 33.0 | 3.14e-01 | 92.5% | 53.8% |
| 3275395 | 386.1.1.3 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-TRAF | 0.51 | 40.0 | 3.33e-01 | 88.7% | 51.6% |
D2
medium
residues 42-126
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1x6hA00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.64 | 37.0 | 3.74e-01 | 91.8% | 55.8% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3542649 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.60 | 49.0 | 4.78e-01 | 91.8% | 92.6% |
| 3915203 | 386.1.1.219 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-POGZ | 0.55 | 48.0 | 3.47e-01 | 100.0% | 64.7% |
| 3730782 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.55 | 33.0 | 3.46e-01 | 78.8% | 65.0% |
| 3862387 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.53 | 29.0 | 2.94e-01 | 87.1% | 54.8% |
| 3392796 | 386.1.1.25 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-H2C2_5 | 0.52 | 40.0 | 4.07e-01 | 97.6% | 83.1% |