←Back to structures
hypothetical_protein_BZK12_gp032
Euk-VirLymphocystis_disease_virus_Sa
hypothetical_protein_BZK12_gp032__YP_009342100__Lymphocystis_disease_virus_Sa__1898060
Identity
- Accession:
- YP_009342100 ↗
- Protein ID:
- hypothetical_protein_BZK12_gp032
- Kingdom:
- euk
Quality
85.2
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Pimascovirales›
Iridoviridae›
Lymphocystivirus›
Lymphocystis_disease_virus_Sa
TaxID: 1898060
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-56
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1s8nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.91 | 61.0 | 6.04e-01 | 71.4% | 67.2% |
| 2iieA01 | 4.10.520.10 | Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins | 0.76 | 57.0 | 4.57e-01 | 80.4% | 53.7% |
| 1zhcA00 | 6.10.280.50 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.76 | 52.0 | 4.70e-01 | 75.0% | 52.6% |
| 2e1qC10 | 3.30.365.10 | Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain | 0.63 | 47.0 | 3.55e-01 | 91.1% | 34.4% |
| 3veaA02 | 1.10.1220.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like | 0.58 | 44.0 | 4.52e-01 | 91.1% | 96.2% |
| 1bjaA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 44.0 | 3.68e-01 | 91.1% | 65.3% |
| 4limA00 | 3.90.920.10 | Alpha Beta › Alpha-Beta Complex › DNA primase, PRIM domain › DNA primase, PRIM domain | 0.51 | 41.0 | 2.58e-01 | 100.0% | 24.7% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3839206 | 101.11.1.1 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase | 0.82 | 63.0 | 5.53e-01 | 82.1% | 58.7% |
| 3536512 | 192.29.1.100 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › DUF4211 | 0.70 | 50.0 | 3.68e-01 | 76.8% | 99.3% |
| 3404256 | 101.1.1.112 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › MADF_DNA_bdg | 0.69 | 56.0 | 4.72e-01 | 92.9% | 67.0% |
| 5035309 | 7543.1.1.2 ↗ | a/b three-layered sandwiches › Methylglyoxal synthase-like › Methylglyoxal synthase-like › Methylglyoxal synthase-like › MGS | 0.69 | 62.0 | 4.12e-01 | 98.2% | 91.9% |
| 3962203 | 5051.1.1.0 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like | 0.67 | 57.0 | 3.28e-01 | 94.6% | 39.0% |
| 5045747 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.65 | 45.0 | 3.82e-01 | 71.4% | 90.0% |
| 3322037 | 148.1.3.213 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_bind | 0.64 | 45.0 | 4.28e-01 | 76.8% | 60.0% |