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hypothetical_protein_BZK12_gp096

Euk-Vir

Lymphocystis_disease_virus_Sa

hypothetical_protein_BZK12_gp096__YP_009342164__Lymphocystis_disease_virus_Sa__1898060

Identity

Accession:
YP_009342164 ↗
Protein ID:
hypothetical_protein_BZK12_gp096
Kingdom:
euk

Quality

68.0 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Iridoviridae› Lymphocystivirus› Lymphocystis_disease_virus_Sa

TaxID: 1898060

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 79-131
PDB
Domain cluster: rep: hypothetical_protein_ATL82_gp049__YP_009182048__Epizootic_haematopoietic_necrosis_virus__100217__D83-132
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2vouB01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.78 39.0 2.45e-01 100.0% 10.4%
2wweA01 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.68 41.0 3.19e-01 98.1% 30.8%
3w5mA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.65 57.0 3.87e-01 100.0% 51.8%
2uz8A01 3.40.30.90 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › 0.59 32.0 3.24e-01 98.1% 48.1%
4jcwA02 2.60.40.760 Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain 0.58 51.0 4.19e-01 100.0% 55.6%
3m1cA04 2.60.40.3190 Mainly Beta › Sandwich › Immunoglobulin-like › Herpesvirus glycoprotein H, C-terminal domain 0.58 46.0 3.68e-01 100.0% 47.7%
1y13A00 3.30.479.10 Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › 6-pyruvoyl tetrahydropterin synthase/QueD 0.54 43.0 3.25e-01 100.0% 78.5%
1q1aA02 3.30.1600.10 Alpha Beta › 2-Layer Sandwich › SIR2/SIRT2 'Small Domain' › SIR2/SIRT2 'Small Domain' 0.53 43.0 3.50e-01 94.3% 50.5%
1aorA02 1.10.569.10 Mainly Alpha › Orthogonal Bundle › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A; domain 2 › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A, domain 2 0.53 38.0 2.73e-01 79.2% 98.4%
2e8yA01 2.60.40.2320 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 44.0 3.70e-01 100.0% 54.5%
4wiwA02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.53 39.0 3.62e-01 81.1% 100.0%
3itwA02 3.30.720.110 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.53 31.0 3.06e-01 98.1% 53.6%
3wdhA01 2.60.40.2320 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 43.0 3.69e-01 100.0% 57.3%
5iryA05 2.60.40.60 Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins 0.52 46.0 3.92e-01 100.0% 64.7%
3e35A01 3.40.50.10900 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › PAC-like subunit 0.51 36.0 2.55e-01 83.0% 73.3%
3l4gB02 3.50.40.10 Alpha Beta › 3-Layer(bba) Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 3 › Phenylalanyl-trna Synthetase, Chain B, domain 3 0.51 42.0 2.93e-01 98.1% 92.3%
4ri0A01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.51 40.0 2.89e-01 100.0% 27.3%
5yxgB01 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 44.0 3.10e-01 100.0% 82.8%
ECOD (24)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4987919 56.2.1.1 ↗ beta sandwiches › Epsilon subunit of F1F0-ATP synthase-N › CO dehydrogenase accessory protein CooT › CO dehydrogenase accessory protein CooT › CooT 0.83 41.0 3.95e-01 100.0% 43.1%
4982571 56.2.1.1 ↗ beta sandwiches › Epsilon subunit of F1F0-ATP synthase-N › CO dehydrogenase accessory protein CooT › CO dehydrogenase accessory protein CooT › CooT 0.80 40.0 3.87e-01 100.0% 43.1%
5065184 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 41.0 4.45e-01 100.0% 64.4%
3639196 3256.1.1.0 ↗ a+b two layers › DUF2233 N-terminal domain › DUF2233 N-terminal domain › DUF2233 N-terminal domain 0.75 42.0 4.39e-01 100.0% 61.2%
3179214 2003.1.2.29 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8 0.68 41.0 2.37e-01 100.0% 7.7%
4014598 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.63 43.0 2.79e-01 100.0% 17.3%
5004414 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.60 50.0 3.99e-01 98.1% 75.7%
4286118 10.12.1.9 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › JmjC 0.60 50.0 3.17e-01 100.0% 31.7%
4528716 3784.1.1.0 ↗ a+b two layers › Putative lipoprotein CPF_1278-related › Putative lipoprotein CPF_1278-related › Putative lipoprotein CPF_1278-related 0.59 52.0 4.19e-01 100.0% 57.1%
4042662 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 46.0 4.46e-01 100.0% 81.7%
3675525 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.55 46.0 4.25e-01 98.1% 73.5%
3573810 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.55 30.0 2.37e-01 100.0% 21.3%
4938247 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 43.0 3.67e-01 100.0% 68.6%
4315251 211.1.1.0 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.53 33.0 3.02e-01 98.1% 44.0%
3716955 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 46.0 4.26e-01 100.0% 75.7%
3595625 211.1.1.0 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.53 42.0 3.92e-01 100.0% 69.2%
3646137 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.53 39.0 2.79e-01 86.8% 39.5%
5033989 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 46.0 4.55e-01 100.0% 96.4%
5058895 11.1.4.23 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CarboxypepD_reg 0.53 46.0 4.24e-01 100.0% 78.6%
3274385 375.1.1.107 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Dynactin_p62 0.52 41.0 3.84e-01 90.6% 76.8%
3178821 2006.1.1.13 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Acid_PPase 0.52 40.0 2.83e-01 100.0% 34.6%
4621403 11.1.1.285 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › RibLong 0.51 46.0 3.51e-01 100.0% 92.5%
4014325 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.51 41.0 3.87e-01 96.2% 72.9%
3446646 11.1.1.23 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Expansin_C 0.50 40.0 3.78e-01 100.0% 75.3%
D2 medium residues 1-78
PDB