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hypothetical_protein_BZK12_gp101

Euk-Vir

Lymphocystis_disease_virus_Sa

hypothetical_protein_BZK12_gp101__YP_009342169__Lymphocystis_disease_virus_Sa__1898060

Identity

Accession:
YP_009342169 ↗
Protein ID:
hypothetical_protein_BZK12_gp101
Kingdom:
euk

Quality

69.7 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Iridoviridae› Lymphocystivirus› Lymphocystis_disease_virus_Sa

TaxID: 1898060

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-54
PDB
Domain cluster: rep: hypothetical_protein_BZK12_gp015__YP_009342083__Lymphocystis_disease_virus_Sa__1898060__D10-52
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1v9dB00 1.20.58.2220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Formin, FH2 domain 0.60 41.0 2.56e-01 77.6% 11.5%
2elcA01 1.20.970.10 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.56 38.0 3.53e-01 71.4% 70.1%
2k85A00 1.10.10.440 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain 0.56 38.0 3.58e-01 71.4% 80.0%
1aa7A02 1.10.10.180 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Influenza matrix protein M1, N-terminal subdomain 2 0.54 45.0 3.98e-01 98.0% 75.6%
2be4A01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.53 41.0 3.62e-01 89.8% 64.2%
4dezA03 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.51 36.0 3.31e-01 79.6% 76.4%
ECOD (13)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3353640 130.1.1.0 ↗ alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif 0.71 57.0 5.22e-01 95.9% 82.9%
3727111 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.63 51.0 4.67e-01 95.9% 81.4%
3810074 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.62 52.0 4.55e-01 100.0% 69.6%
3806475 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.62 51.0 4.60e-01 100.0% 73.3%
3454624 130.1.1.1 ↗ alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › SAP 0.62 49.0 4.85e-01 100.0% 89.1%
3643181 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.61 47.0 4.27e-01 93.9% 72.0%
4355361 184.1.1.1 ↗ alpha arrays › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Glycos_trans_3N 0.60 41.0 3.75e-01 73.5% 74.3%
5054392 184.1.1.1 ↗ alpha arrays › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Glycos_trans_3N 0.58 39.0 3.62e-01 73.5% 74.3%
3595717 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.58 48.0 4.46e-01 100.0% 89.2%
3736518 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.57 46.0 4.18e-01 100.0% 86.7%
3429995 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.54 46.0 4.12e-01 100.0% 79.5%
4681371 184.1.1.1 ↗ alpha arrays › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Glycos_trans_3N 0.53 35.0 3.33e-01 73.5% 67.1%
5017991 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.53 36.0 3.45e-01 73.5% 63.3%
D2 high residues 60-255
PDB
Domain cluster: rep: asb010__YP_009112571__Agrotis_segetum_nucleopolyhedrovirus_B__1580580__D84-283
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3fssA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 23.0 3.36e-01 86.2% 75.6%
1lomA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.60 18.0 2.46e-01 79.1% 47.5%
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 16.0 2.85e-01 79.6% 85.1%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 17.0 2.63e-01 80.1% 59.5%
4csbA00 2.40.128.480 Mainly Beta › Beta Barrel › Lipocalin › Rhodococcus equi virulence-associated protein 0.56 30.0 3.80e-01 84.7% 87.6%
1dz1A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.56 17.0 2.78e-01 80.1% 70.0%
2rk0A01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.55 22.0 2.79e-01 97.4% 56.2%
1gutA00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.51 18.0 3.12e-01 89.3% 95.5%
ECOD (11)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5044389 4.26.1.0 ↗ beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 0.69 17.0 3.54e-01 80.6% 84.0%
4054649 4.1.1.86 ↗ beta barrels › SH3 › SH3 › SH3 › GW 0.63 22.0 3.61e-01 80.1% 82.7%
1172093 222.1.1.10 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT_3 0.57 24.0 3.14e-01 79.6% 66.4%
4614883 1.1.8.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.57 22.0 3.33e-01 90.8% 82.5%
3737927 220.1.1.294 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PF26663 0.57 21.0 2.73e-01 82.1% 57.3%
3602123 1.1.8.4 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › eIF2_C 0.55 21.0 3.22e-01 86.7% 83.3%
4228874 1.1.8.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.54 20.0 3.10e-01 87.2% 82.7%
3224246 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.51 23.0 3.02e-01 86.7% 75.0%
4996023 2.1.1.77 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RNA_pol_RpbG 0.51 24.0 3.08e-01 100.0% 75.7%
3576362 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 26.0 3.63e-01 96.9% 98.0%
3967128 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.50 20.0 3.19e-01 98.0% 100.0%