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hypothetical_protein_C1178_gp125

Euk-Vir

Flamingopox_virus_FGPVKD09

hypothetical_protein_C1178_gp125__YP_009448040__Flamingopox_virus_FGPVKD09__2059380

Identity

Accession:
YP_009448040 ↗
Protein ID:
hypothetical_protein_C1178_gp125
Kingdom:
euk

Quality

78.4 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Pokkesviricetes› Chitovirales› Poxviridae› Avipoxvirus› Flamingopox_virus_FGPVKD09

TaxID: 2059380

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-92
PDB
Domain cluster: rep: hypothetical_protein_HM89_gp126__YP_009046354__Pigeonpox_virus__10264__D41-120
D2 high residues 98-173
PDB
Domain cluster: rep: hypothetical_protein_ASN15_gp118__YP_009177139__Turkeypox_virus__336486__D87-173
CATH (31)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3bjdA01 1.10.1240.20 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Lytic transglycosylase, superhelical linker domain 0.73 56.0 5.38e-01 82.9% 90.9%
4o6mA02 1.20.120.1760 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CDP-alcohol phosphotransferase transmembrane (TM) domain 0.73 64.0 4.77e-01 100.0% 48.7%
3fb2A01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.71 56.0 5.06e-01 86.8% 96.2%
2gomA00 1.10.10.1270 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Sbi, C3 binding domain IV 0.71 50.0 5.42e-01 78.9% 93.4%
1dd5A01 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.71 53.0 4.75e-01 81.6% 92.7%
3ut4A00 1.25.40.750 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Domain of unknown function DUF5071 0.70 56.0 4.81e-01 97.4% 53.1%
1fpoC02 1.20.1280.20 Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain 0.69 52.0 4.98e-01 81.6% 90.1%
2yfaA02 1.20.1440.210 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 0.69 51.0 4.50e-01 80.3% 67.2%
2a2fX02 1.20.58.670 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dsl1p vesicle tethering complex, Tip20p subunit, domain D 0.69 57.0 4.86e-01 93.4% 71.3%
3k1rA01 1.20.1160.20 Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › 0.69 46.0 4.50e-01 77.6% 64.2%
3pubA01 1.10.10.2400 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Lepidopteran low molecular weight (30 kD) lipoprotein, N-terminal domain 0.67 48.0 4.89e-01 81.6% 78.4%
2oduA02 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.67 53.0 4.82e-01 88.2% 94.3%
2c5iT00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.67 52.0 4.87e-01 85.5% 98.9%
3c5wA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.65 54.0 3.89e-01 93.4% 49.1%
1lkoA01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.64 52.0 4.23e-01 89.5% 91.7%
2iufA02 1.20.1370.20 Mainly Alpha › Up-down Bundle › Hemocyanin, N-terminal domain › Catalase, four-helical domain 0.64 48.0 4.46e-01 89.5% 63.3%
3ztaA00 1.10.490.130 Mainly Alpha › Orthogonal Bundle › Globin-like › 0.63 54.0 4.55e-01 100.0% 76.3%
3qhbA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.62 54.0 4.13e-01 97.4% 90.5%
1ks8A00 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.62 52.0 3.35e-01 98.7% 57.7%
5dqqA02 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.62 50.0 4.21e-01 96.1% 51.5%
1vb5A01 1.20.120.420 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 0.62 52.0 4.86e-01 94.7% 81.9%
2dlaA01 1.20.930.50 Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › 0.61 50.0 4.04e-01 92.1% 58.7%
5fhiA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.61 46.0 3.86e-01 82.9% 91.4%
1f45B00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.57 41.0 3.38e-01 84.2% 42.9%
3nkyA03 1.20.960.20 Mainly Alpha › Up-down Bundle › Mitochondrial Import Receptor Subunit Tom20; Chain A › 0.56 46.0 4.67e-01 96.1% 95.9%
2q00B00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.55 41.0 3.46e-01 88.2% 48.4%
1iuqA01 1.10.1200.50 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Glycerol-3-phosphate acyltransferase, alpha helical bundle, N-terminal 0.55 36.0 3.68e-01 89.5% 68.4%
3beyD00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.52 44.0 4.12e-01 100.0% 77.7%
2kjgA00 1.20.120.970 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.51 36.0 3.44e-01 78.9% 59.6%
3l9fA02 6.10.140.1570 Special › Helix non-globular › Helix Hairpins › 0.51 38.0 3.76e-01 80.3% 100.0%
4gytA00 1.20.120.740 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YgfB uncharacterised protein family PF03695 0.51 43.0 3.43e-01 100.0% 68.4%
ECOD (27)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3239804 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.78 71.0 5.84e-01 98.7% 86.2%
4037022 604.15.1.1 ↗ alpha bundles › Spectrin repeat-like › Efb C-domain-like › Efb C-domain-like › efb-c 0.74 51.0 5.75e-01 73.7% 100.0%
3931763 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.74 62.0 5.44e-01 93.4% 73.9%
4034568 604.15.1.1 ↗ alpha bundles › Spectrin repeat-like › Efb C-domain-like › Efb C-domain-like › efb-c 0.74 54.0 5.34e-01 78.9% 74.7%
3675734 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.71 59.0 5.42e-01 92.1% 72.0%
3683086 109.4.1.257 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PDS5 0.69 61.0 3.59e-01 98.7% 12.6%
3744474 109.54.1.1 ↗ alpha superhelices › Repetitive alpha hairpins › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › Utp12 0.68 56.0 5.13e-01 92.1% 72.0%
3603360 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.67 59.0 5.21e-01 100.0% 100.0%
3410449 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.67 57.0 3.33e-01 97.4% 10.9%
3783246 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.67 55.0 3.71e-01 92.1% 23.7%
3713379 109.4.1.22 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Adaptin_N 0.66 56.0 3.76e-01 97.4% 34.7%
3368681 109.4.1.935 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TOR1L1_N 0.65 56.0 3.66e-01 98.7% 34.6%
3317246 611.3.1.0 ↗ alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 0.65 54.0 4.77e-01 90.8% 71.8%
4668629 109.4.1.891 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_HEATR1 0.65 53.0 4.01e-01 90.8% 81.6%
3450807 109.4.1.1262 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long 0.65 57.0 3.74e-01 100.0% 38.9%
55685 150.1.1.0 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin 0.64 51.0 4.19e-01 89.5% 91.1%
3559704 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.63 50.0 4.82e-01 89.5% 97.8%
4985507 604.10.1.0 ↗ alpha bundles › Spectrin repeat-like › Enzyme IIa from lactose specific PTS, IIa-lac › Enzyme IIa from lactose specific PTS, IIa-lac 0.63 50.0 4.77e-01 88.2% 100.0%
3960709 4048.1.1.1 ↗ alpha bundles › Second alpha-helical domain in heme-dependent catalases › Second alpha-helical domain in heme-dependent catalases › Second alpha-helical domain in heme-dependent catalases › Catalase-rel 0.61 48.0 4.77e-01 89.5% 81.2%
2055366 622.1.1.2 ↗ alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain › HsbA 0.60 43.0 4.27e-01 77.6% 100.0%
2507077 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.59 45.0 3.51e-01 82.9% 89.1%
54052 4048.1.1.1 ↗ alpha bundles › Second alpha-helical domain in heme-dependent catalases › Second alpha-helical domain in heme-dependent catalases › Second alpha-helical domain in heme-dependent catalases › Catalase-rel 0.57 46.0 4.80e-01 94.7% 97.1%
3821754 509.1.1.10 ↗ alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain › HHD_RTEL1 0.54 41.0 4.11e-01 86.8% 90.0%
3755347 109.4.1.1451 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_GEMI5 0.52 45.0 3.71e-01 97.4% 64.1%
4949396 606.1.1.0 ↗ alpha complex topology › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain 0.51 38.0 3.61e-01 92.1% 67.8%
3604256 3558.1.1.0 ↗ alpha arrays › HSDR subunit helical domain › HSDR subunit helical domain › HSDR subunit helical domain 0.51 43.0 3.82e-01 97.4% 100.0%
4944387 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.51 40.0 3.70e-01 89.5% 85.7%