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hypothetical_protein_C1178_gp240
Euk-VirFlamingopox_virus_FGPVKD09
hypothetical_protein_C1178_gp240__YP_009448146__Flamingopox_virus_FGPVKD09__2059380
Identity
- Accession:
- YP_009448146 ↗
- Protein ID:
- hypothetical_protein_C1178_gp240
- Kingdom:
- euk
Quality
71.8
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Pokkesviricetes›
Chitovirales›
Poxviridae›
Avipoxvirus›
Flamingopox_virus_FGPVKD09
TaxID: 2059380
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 41-105
Domain cluster:
representative
CATH (56)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2xppA00 | 1.20.930.10 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 0.82 | 69.0 | 5.34e-01 | 90.8% | 45.3% |
| 2w3cA01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.82 | 64.0 | 4.19e-01 | 84.6% | 43.4% |
| 3ph0C00 | 1.25.40.1040 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.80 | 61.0 | 6.61e-01 | 87.7% | 100.0% |
| 7ep3A01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.78 | 63.0 | 4.22e-01 | 87.7% | 48.5% |
| 1td6A01 | 1.20.1480.10 | Mainly Alpha › Up-down Bundle › hypothetical protein mp506/mpn330, domain 1 › hypothetical protein mp506/mpn330, domain 1 | 0.77 | 65.0 | 5.61e-01 | 93.8% | 60.8% |
| 1hu3A00 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.77 | 62.0 | 4.35e-01 | 87.7% | 31.9% |
| 6xkyA01 | 1.20.1330.10 | Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain | 0.76 | 52.0 | 3.67e-01 | 70.8% | 61.0% |
| 7ep1B01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.74 | 66.0 | 4.42e-01 | 98.5% | 28.9% |
| 1nafA02 | 1.20.58.160 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.73 | 62.0 | 5.74e-01 | 96.9% | 100.0% |
| 2l6jA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.73 | 59.0 | 4.98e-01 | 92.3% | 53.2% |
| 2uubT00 | 1.20.58.110 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Ribosomal protein S20 | 0.72 | 62.0 | 5.46e-01 | 98.5% | 76.8% |
| 6axgA01 | 1.20.870.10 | Mainly Alpha › Up-down Bundle › Son of sevenless (SoS) protein; Chain S, domain 1 › Son of sevenless (SoS) protein Chain: S domain 1 | 0.72 | 56.0 | 5.11e-01 | 86.2% | 73.0% |
| 7qihA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.71 | 53.0 | 4.60e-01 | 86.2% | 51.5% |
| 2w0gA00 | 1.20.58.610 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Cdc37, Hsp90 binding domain | 0.71 | 57.0 | 4.54e-01 | 87.7% | 56.6% |
| 7miqA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.71 | 58.0 | 4.95e-01 | 92.3% | 79.1% |
| 2jpnA00 | 1.20.1280.210 | Mainly Alpha › Up-down Bundle › Monooxygenase › Uncharacterised protein UvsW.1 | 0.71 | 61.0 | 5.77e-01 | 98.5% | 83.5% |
| 4mk3A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.70 | 60.0 | 5.01e-01 | 96.9% | 79.1% |
| 2dbaA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.70 | 53.0 | 4.40e-01 | 90.8% | 45.8% |
| 2qsbA00 | 1.20.1440.50 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Ta0600-like | 0.70 | 55.0 | 5.07e-01 | 86.2% | 77.6% |
| 3ezxA01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.70 | 54.0 | 4.95e-01 | 84.6% | 82.6% |
| 3mq1A01 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.69 | 58.0 | 5.16e-01 | 92.3% | 97.8% |
| 4gltA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.69 | 58.0 | 4.94e-01 | 96.9% | 78.1% |
| 3nbxX03 | 1.20.58.1510 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.69 | 55.0 | 4.78e-01 | 87.7% | 88.1% |
| 3qsgA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.69 | 56.0 | 4.63e-01 | 89.2% | 85.2% |
| 6wb9201 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.69 | 53.0 | 3.49e-01 | 90.8% | 19.4% |
| 2pvqA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.68 | 57.0 | 4.89e-01 | 93.8% | 78.3% |
| 2rpaA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.68 | 56.0 | 5.39e-01 | 95.4% | 94.8% |
| 2is6A04 | 1.10.486.10 | Mainly Alpha › Orthogonal Bundle › PCRA; domain 4 › PCRA; domain 4 | 0.68 | 49.0 | 3.71e-01 | 78.5% | 87.6% |
| 4aifA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.67 | 53.0 | 4.18e-01 | 89.2% | 47.9% |
| 2e9xA01 | 1.20.58.1030 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.67 | 56.0 | 4.62e-01 | 98.5% | 77.3% |
| 4ivfA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.66 | 54.0 | 4.53e-01 | 92.3% | 79.3% |
| 4xi0F00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.66 | 50.0 | 3.71e-01 | 89.2% | 29.8% |
| 2vgxB00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.66 | 54.0 | 4.22e-01 | 90.8% | 62.8% |
| 3bjdA01 | 1.10.1240.20 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Lytic transglycosylase, superhelical linker domain | 0.66 | 53.0 | 4.85e-01 | 90.8% | 79.5% |
| 7zxkC01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.66 | 52.0 | 3.99e-01 | 86.2% | 74.0% |
| 2i2xB01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.66 | 55.0 | 4.85e-01 | 95.4% | 94.0% |
| 2oebA00 | 1.10.520.30 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › AF1862-like domain | 0.65 | 49.0 | 3.72e-01 | 80.0% | 98.0% |
| 5fhiA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.65 | 52.0 | 4.25e-01 | 95.4% | 90.6% |
| 7nc3F01 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.65 | 52.0 | 4.47e-01 | 93.8% | 80.7% |
| 2psmA00 | 1.20.1250.70 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › Interleukin-15/Interleukin-21 | 0.65 | 55.0 | 4.47e-01 | 92.3% | 61.5% |
| 1yo7A00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.64 | 53.0 | 4.47e-01 | 96.9% | 80.0% |
| 1hqoA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.64 | 54.0 | 4.41e-01 | 98.5% | 78.6% |
| 3lszA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.64 | 52.0 | 4.30e-01 | 93.8% | 72.8% |
| 3behB01 | 1.20.120.540 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels | 0.63 | 53.0 | 4.45e-01 | 95.4% | 73.5% |
| 4w9rA02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.62 | 49.0 | 4.36e-01 | 86.2% | 93.6% |
| 1yxrA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.61 | 52.0 | 5.08e-01 | 98.5% | 97.3% |
| 1blwC00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.61 | 53.0 | 4.12e-01 | 98.5% | 62.4% |
| 3qavA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.60 | 48.0 | 3.92e-01 | 93.8% | 87.9% |
| 2oyoA02 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.60 | 47.0 | 3.76e-01 | 84.6% | 56.8% |
| 2elcA01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.60 | 42.0 | 4.18e-01 | 84.6% | 73.1% |
| 4hehA01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.59 | 45.0 | 4.21e-01 | 86.2% | 90.4% |
| 1w36C06 | 1.10.10.990 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.58 | 50.0 | 4.82e-01 | 95.4% | 95.8% |
| 4hr1A00 | 1.20.1270.410 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.56 | 49.0 | 4.08e-01 | 100.0% | 86.4% |
| 2prrA02 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.55 | 43.0 | 3.53e-01 | 87.7% | 86.6% |
| 2mabA00 | 1.10.10.1350 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Spidroin domain, C-terminal domain | 0.52 | 41.0 | 3.59e-01 | 90.8% | 73.4% |
| 3qowA01 | 1.10.260.60 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › | 0.52 | 45.0 | 3.71e-01 | 100.0% | 59.0% |
ECOD (55)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3435198 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.88 | 76.0 | 4.20e-01 | 92.3% | 9.7% |
| 3657649 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.88 | 75.0 | 4.68e-01 | 92.3% | 22.8% |
| 5021503 | 109.4.1.207 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_2 | 0.87 | 73.0 | 4.62e-01 | 93.8% | 19.7% |
| 3885579 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.87 | 78.0 | 5.28e-01 | 98.5% | 66.8% |
| 3623615 | 109.4.1.222 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DCB | 0.84 | 77.0 | 5.23e-01 | 100.0% | 59.0% |
| 3240692 | 109.4.1.527 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › BAF250_C | 0.81 | 71.0 | 4.20e-01 | 100.0% | 13.7% |
| 3168103 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.81 | 68.0 | 5.94e-01 | 92.3% | 83.2% |
| 3981499 | 109.4.1.1928 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF30223 | 0.80 | 63.0 | 5.28e-01 | 83.1% | 73.3% |
| 3718498 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.80 | 73.0 | 6.48e-01 | 100.0% | 97.8% |
| 4459896 | 622.4.1.1 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related › Blo-t-5 | 0.80 | 71.0 | 5.84e-01 | 98.5% | 88.6% |
| 3996096 | 109.4.1.590 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › NopRA1 | 0.80 | 70.0 | 4.70e-01 | 98.5% | 30.6% |
| 4493280 | 109.4.1.130 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PHAT | 0.79 | 68.0 | 5.58e-01 | 96.9% | 90.0% |
| 3275755 | 109.4.1.435 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RICTOR_N | 0.79 | 70.0 | 5.41e-01 | 98.5% | 61.4% |
| 3165843 | 109.4.1.191 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_7 | 0.78 | 65.0 | 4.44e-01 | 90.8% | 27.3% |
| 3496624 | 109.4.1.32 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MIF4G | 0.78 | 63.0 | 3.72e-01 | 87.7% | 12.4% |
| 3683778 | 611.3.1.0 ↗ | alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 0.78 | 67.0 | 5.65e-01 | 93.8% | 76.2% |
| 3257258 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.78 | 63.0 | 5.58e-01 | 89.2% | 61.1% |
| 3597397 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.78 | 69.0 | 4.73e-01 | 96.9% | 38.6% |
| 3894562 | 611.3.1.0 ↗ | alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 0.77 | 66.0 | 5.46e-01 | 92.3% | 58.2% |
| 3221760 | 604.1.1.140 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › PF27005 | 0.77 | 61.0 | 5.62e-01 | 87.7% | 96.5% |
| 5071224 | 109.4.1.198 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12 | 0.76 | 66.0 | 4.07e-01 | 96.9% | 75.0% |
| 4012881 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.75 | 64.0 | 5.17e-01 | 95.4% | 63.2% |
| 3958099 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.75 | 61.0 | 4.04e-01 | 87.7% | 39.2% |
| 4012164 | 1134.1.1.0 ↗ | alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain | 0.75 | 63.0 | 6.33e-01 | 92.3% | 98.5% |
| 3378121 | 109.4.1.276 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › EDC4_C | 0.75 | 63.0 | 4.77e-01 | 92.3% | 46.7% |
| 5044452 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.75 | 62.0 | 3.88e-01 | 92.3% | 47.9% |
| 3516505 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.75 | 66.0 | 4.51e-01 | 100.0% | 35.7% |
| 3628031 | 109.4.1.146 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Cohesin_load | 0.74 | 61.0 | 4.00e-01 | 90.8% | 24.0% |
| 3941516 | 109.4.1.1555 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_7, TPR_19 | 0.73 | 58.0 | 3.97e-01 | 90.8% | 24.3% |
| 4058363 | 611.3.1.8 ↗ | alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Arm | 0.73 | 66.0 | 5.52e-01 | 100.0% | 61.8% |
| 4212709 | 109.4.1.191 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_7 | 0.73 | 59.0 | 4.56e-01 | 90.8% | 61.3% |
| 3975400 | 109.4.1.1555 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_7, TPR_19 | 0.73 | 59.0 | 3.73e-01 | 90.8% | 26.7% |
| 3496700 | 109.4.1.890 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HAT_Syf1_CNRKL1_C | 0.72 | 59.0 | 4.17e-01 | 90.8% | 32.0% |
| 3697809 | 109.4.1.1323 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_IMB1 | 0.72 | 61.0 | 3.73e-01 | 98.5% | 15.7% |
| 3702188 | 4168.1.1.0 ↗ | alpha duplicates or obligate multimers › HAMP domain › HAMP domain › HAMP domain | 0.71 | 53.0 | 5.69e-01 | 86.2% | 96.4% |
| 3446998 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.71 | 55.0 | 3.88e-01 | 93.8% | 26.0% |
| 5055634 | 633.12.1.1 ↗ | alpha bundles › Bromodomain-like › Ta0600-like › Ta0600-like › UPF0147 | 0.70 | 54.0 | 5.10e-01 | 84.6% | 77.5% |
| 5045348 | 604.34.1.0 ↗ | alpha bundles › Spectrin repeat-like › Helical bundle domain in arginine decarboxylase › Helical bundle domain in arginine decarboxylase | 0.69 | 58.0 | 5.34e-01 | 95.4% | 82.4% |
| 4988605 | 2004.1.1.76 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 | 0.69 | 57.0 | 3.50e-01 | 90.8% | 18.4% |
| 3830624 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.69 | 55.0 | 4.27e-01 | 90.8% | 41.2% |
| 3063144 | 4950.1.1.5 ↗ | alpha complex topology › Botulinum neurotoxin A heavy chain › Botulinum neurotoxin A heavy chain › Botulinum neurotoxin A heavy chain › PF26319 | 0.69 | 59.0 | 3.61e-01 | 98.5% | 47.9% |
| 3687919 | 109.1.1.26 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › GST_N_3 | 0.68 | 57.0 | 3.76e-01 | 92.3% | 45.7% |
| 3580455 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.68 | 58.0 | 4.82e-01 | 100.0% | 72.5% |
| 3731622 | 109.1.1.26 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › GST_N_3 | 0.66 | 54.0 | 3.63e-01 | 90.8% | 46.9% |
| 4984709 | 4995.1.1.1 ↗ | alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 | 0.66 | 54.0 | 5.01e-01 | 87.7% | 91.3% |
| 3476812 | 375.1.1.233 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_IFT122_C | 0.65 | 52.0 | 3.36e-01 | 87.7% | 100.0% |
| 3714093 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.65 | 54.0 | 4.74e-01 | 93.8% | 72.0% |
| 4970557 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.64 | 56.0 | 5.49e-01 | 96.9% | 100.0% |
| 3399531 | 1134.1.1.0 ↗ | alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain | 0.60 | 45.0 | 4.02e-01 | 84.6% | 85.0% |
| 4494528 | 632.2.1.40 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains › DUF515 | 0.56 | 43.0 | 4.60e-01 | 83.1% | 100.0% |
| 3741080 | 2485.1.1.1 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin | 0.56 | 46.0 | 3.36e-01 | 90.8% | 61.1% |
| 3257866 | 4967.1.1.0 ↗ | alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases | 0.54 | 44.0 | 3.20e-01 | 95.4% | 61.0% |
| 3929805 | 188.1.1.1 ↗ | alpha arrays › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Hormone_recep | 0.54 | 46.0 | 3.34e-01 | 98.5% | 57.1% |
| 5074896 | 2007.1.14.7 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › HGD-D | 0.52 | 40.0 | 2.94e-01 | 87.7% | 44.4% |
| 3708001 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.50 | 37.0 | 3.64e-01 | 80.0% | 84.3% |
D2
medium
residues 106-183
Domain cluster:
representative
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3lpzA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.76 | 62.0 | 4.09e-01 | 88.5% | 24.5% |
| 4l9mA01 | 1.20.870.10 | Mainly Alpha › Up-down Bundle › Son of sevenless (SoS) protein; Chain S, domain 1 › Son of sevenless (SoS) protein Chain: S domain 1 | 0.74 | 63.0 | 5.24e-01 | 92.3% | 60.2% |
| 1is9A00 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.72 | 58.0 | 3.73e-01 | 87.2% | 30.4% |
| 2r5sA02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.72 | 56.0 | 5.39e-01 | 85.9% | 73.9% |
| 2xevB00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.67 | 48.0 | 4.16e-01 | 80.8% | 47.6% |
| 7ru9C01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.67 | 57.0 | 4.04e-01 | 100.0% | 54.7% |
| 2ygwA01 | 1.20.140.90 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Malonyl-CoA decarboxylase, oligemerization domain | 0.66 | 47.0 | 3.81e-01 | 75.6% | 64.1% |
| 6cnzF00 | 1.20.59.10 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase | 0.66 | 50.0 | 3.99e-01 | 82.1% | 52.5% |
| 4f5cA04 | 1.25.50.20 | Mainly Alpha › Alpha Horseshoe › Zincin-like fold › | 0.65 | 51.0 | 3.42e-01 | 87.2% | 20.8% |
| 3ma5A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.65 | 46.0 | 4.47e-01 | 80.8% | 65.6% |
| 3zilA00 | 1.25.10.60 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Rad61, Wapl domain | 0.65 | 53.0 | 3.42e-01 | 89.7% | 35.1% |
| 3draA00 | 1.25.40.120 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Protein prenylyltransferase | 0.64 | 53.0 | 3.55e-01 | 91.0% | 23.8% |
| 2vgxB00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.63 | 47.0 | 3.82e-01 | 82.1% | 42.1% |
| 3edvB01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.63 | 50.0 | 4.21e-01 | 87.2% | 77.2% |
| 2uubT00 | 1.20.58.110 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Ribosomal protein S20 | 0.63 | 53.0 | 4.88e-01 | 92.3% | 88.9% |
| 3lbxB01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 50.0 | 4.51e-01 | 87.2% | 95.3% |
| 3edvA02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 50.0 | 3.80e-01 | 87.2% | 56.8% |
| 2vtyA00 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.61 | 44.0 | 3.64e-01 | 76.9% | 44.4% |
| 3oxfA05 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.60 | 46.0 | 4.75e-01 | 83.3% | 88.0% |
| 2qwoB00 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.60 | 45.0 | 4.30e-01 | 82.1% | 100.0% |
| 2ra1A03 | 1.20.58.770 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.59 | 40.0 | 4.42e-01 | 70.5% | 93.7% |
| 2yhcA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.59 | 52.0 | 3.89e-01 | 100.0% | 37.3% |
| 4y6cA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.57 | 45.0 | 3.44e-01 | 91.0% | 34.4% |
| 3pe0A01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 45.0 | 4.17e-01 | 88.5% | 95.0% |
| 3frrA00 | 1.20.1260.60 | Mainly Alpha › Up-down Bundle › Ferritin › Vacuolar protein sorting-associated protein Ist1 | 0.55 | 48.0 | 3.67e-01 | 100.0% | 42.5% |
| 2w0gA00 | 1.20.58.610 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Cdc37, Hsp90 binding domain | 0.53 | 40.0 | 3.51e-01 | 83.3% | 79.8% |
| 2ho1B00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.52 | 45.0 | 3.34e-01 | 100.0% | 57.9% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5051389 | 109.4.1.207 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_2 | 0.81 | 60.0 | 5.08e-01 | 88.5% | 48.8% |
| 3624969 | 109.4.1.901 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_GCN1 | 0.76 | 63.0 | 3.95e-01 | 88.5% | 37.6% |
| 3739970 | 109.4.1.64 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › GET4 | 0.76 | 60.0 | 4.12e-01 | 85.9% | 25.2% |
| 3795513 | 109.4.1.901 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_GCN1 | 0.76 | 62.0 | 5.39e-01 | 92.3% | 58.3% |
| 3830760 | 109.4.1.496 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sec5 | 0.72 | 64.0 | 3.74e-01 | 100.0% | 21.2% |
| 3726129 | 109.4.1.198 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12 | 0.70 | 51.0 | 4.42e-01 | 83.3% | 50.0% |
| 3520887 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.69 | 61.0 | 4.72e-01 | 100.0% | 56.7% |
| 3537539 | 109.4.1.496 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sec5 | 0.69 | 61.0 | 3.61e-01 | 100.0% | 27.8% |
| 3282788 | 109.4.1.194 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_10 | 0.68 | 49.0 | 3.87e-01 | 76.9% | 39.4% |
| 4265172 | 109.4.1.285 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PSMD12-CSN4_N | 0.68 | 55.0 | 3.74e-01 | 92.3% | 28.1% |
| 3726128 | 109.4.1.777 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.67 | 49.0 | 4.62e-01 | 78.2% | 69.5% |
| 3598524 | 109.4.1.5 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1 | 0.65 | 58.0 | 3.94e-01 | 100.0% | 31.6% |
| 3577473 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.64 | 50.0 | 4.28e-01 | 85.9% | 51.5% |
| 4978586 | 604.9.1.0 ↗ | alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 | 0.64 | 50.0 | 4.54e-01 | 87.2% | 65.5% |
| 3789674 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.62 | 56.0 | 4.02e-01 | 100.0% | 42.7% |
| 3570651 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.61 | 49.0 | 4.61e-01 | 87.2% | 97.9% |
| 3522803 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.61 | 47.0 | 3.53e-01 | 87.2% | 48.4% |
| 3517181 | 109.4.1.1286 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_12 | 0.60 | 49.0 | 4.07e-01 | 91.0% | 53.1% |
| 3312166 | 109.4.1.777 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 44.0 | 3.26e-01 | 82.1% | 30.5% |
| 3832366 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 52.0 | 3.68e-01 | 100.0% | 55.5% |
| 2168367 | 109.4.1.1320 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_7, TPR_10, TPR_12 | 0.59 | 45.0 | 3.36e-01 | 85.9% | 30.5% |
| 4201132 | 2003.1.5.31 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GRAS | 0.56 | 51.0 | 3.19e-01 | 100.0% | 21.0% |
| 4954526 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.55 | 44.0 | 3.96e-01 | 89.7% | 74.8% |
| 3939162 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.55 | 40.0 | 3.56e-01 | 78.2% | 74.2% |
| 3621830 | 109.4.1.1706 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › GoLoco, TPR_7, TPR_8, TPR_12 | 0.55 | 47.0 | 2.94e-01 | 100.0% | 54.7% |
| 4364663 | 633.12.1.0 ↗ | alpha bundles › Bromodomain-like › Ta0600-like › Ta0600-like | 0.55 | 39.0 | 3.50e-01 | 89.7% | 52.7% |
| 3236445 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 45.0 | 3.66e-01 | 97.4% | 50.0% |
| 3495073 | 604.1.1.1 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin | 0.55 | 42.0 | 3.90e-01 | 88.5% | 92.7% |
| 3841673 | 604.1.1.1 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin | 0.54 | 44.0 | 4.09e-01 | 91.0% | 99.0% |
| 3982476 | 601.3.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain › Hpt | 0.52 | 46.0 | 3.98e-01 | 97.4% | 67.5% |
| 4975796 | 4953.1.1.0 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like | 0.52 | 37.0 | 3.45e-01 | 74.4% | 86.3% |