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hypothetical_protein_CKM52_gp194

Euk-Vir

Murmansk_poxvirus

hypothetical_protein_CKM52_gp194__YP_009408376__Murmansk_poxvirus__2025359

Identity

Accession:
YP_009408376 ↗
Protein ID:
hypothetical_protein_CKM52_gp194
Kingdom:
euk

Quality

84.4 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 460-549
PDB
D2 medium residues 1-179
PDB
D3 medium residues 180-287
PDB
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3qxlA00 1.10.840.10 Mainly Alpha › Orthogonal Bundle › Son of Sevenless (SoS) protein; Chain S, domain 2 › Ras guanine-nucleotide exchange factors catalytic domain 0.60 44.0 3.49e-01 78.7% 56.3%
4yheA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.57 45.0 3.14e-01 86.1% 50.1%
1b89A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.55 48.0 3.48e-01 97.2% 39.5%
4nvrA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.54 46.0 3.36e-01 93.5% 99.3%
1xriA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.53 40.0 3.60e-01 80.6% 91.4%
5az0A00 3.20.20.100 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain 0.51 41.0 3.02e-01 88.9% 33.0%
1xd4A04 1.10.840.10 Mainly Alpha › Orthogonal Bundle › Son of Sevenless (SoS) protein; Chain S, domain 2 › Ras guanine-nucleotide exchange factors catalytic domain 0.51 44.0 3.60e-01 98.1% 73.9%
3o60A00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.51 38.0 3.25e-01 79.6% 76.9%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3427591 109.4.1.1191 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ARM_LIN_C 0.64 50.0 4.83e-01 85.2% 87.2%
3838924 101.1.1.140 alpha arrays › HTH › HTH › Three-helical HTH › DUF1294 0.59 41.0 4.17e-01 72.2% 96.4%
3727640 7552.1.1.1 a/b three-layered sandwiches › Amidase signature (AS) enzymes › Amidase signature (AS) enzymes › Amidase signature (AS) enzymes › Amidase 0.58 50.0 3.24e-01 99.1% 91.3%
D4 medium residues 288-403
PDB
Pfam (5)
AccessionNameScoreE-valueQ covHMM cov
PF12796.14 best Ank_2 39.8 7.50e-10 69.8% 65.6%
PF13857.13 Ank_5 32.4 1.30e-07 48.3% 83.9%
PF13637.13 Ank_4 31.8 1.90e-07 41.4% 80.0%
PF00023.37 Ank 33.3 5.30e-08 28.4% 97.0%
PF13606.13 Ank_3 28.6 1.50e-06 25.9% 100.0%
D5 medium residues 404-459
PDB
Domain cluster: representative
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1tw9F02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.63 48.0 3.95e-01 89.3% 71.1%
1k8kG00 1.25.40.190 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Actin-related protein 2/3 complex subunit 5 0.61 47.0 3.67e-01 89.3% 59.0%
2cobA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.60 41.0 4.41e-01 71.4% 97.7%
2pbiA02 1.10.1240.60 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › 0.59 42.0 3.47e-01 73.2% 52.5%
1xl3C00 1.20.1280.80 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.59 48.0 4.28e-01 100.0% 93.4%
4qicC01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.57 44.0 3.59e-01 92.9% 85.6%
2lfwA01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.54 41.0 3.24e-01 91.1% 88.7%
1te2A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.53 36.0 3.41e-01 73.2% 63.9%
1gvfB00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.53 44.0 2.89e-01 98.2% 83.3%
2gsvA00 6.10.140.40 Special › Helix non-globular › Helix Hairpins › 0.52 35.0 3.41e-01 71.4% 88.1%
5y6qB02 3.30.390.50 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain 0.52 35.0 2.87e-01 94.6% 36.8%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3262862 109.4.1.517 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Med24_N 0.62 48.0 3.74e-01 92.9% 47.6%
3805367 185.1.1.2 alpha superhelices › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin › LTP_2 0.58 44.0 4.23e-01 89.3% 92.9%
3927475 192.19.1.0 alpha bundles › Long alpha-hairpin › YnzC-like › YnzC-like 0.57 37.0 3.79e-01 94.6% 69.1%
3326759 284.1.3.1 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › SNF5 0.55 38.0 3.50e-01 71.4% 54.7%
3935349 108.1.1.14 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF_assoc_2 0.53 39.0 3.15e-01 78.6% 51.8%