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hypothetical_protein_COTV057
Euk-VirCotia_virus_SPAn232
hypothetical_protein_COTV057__YP_005296245__Cotia_virus_SPAn232__930275
Identity
- Accession:
- YP_005296245 ↗
- Protein ID:
- hypothetical_protein_COTV057
- Kingdom:
- euk
Quality
83.5
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Pokkesviricetes›
Chitovirales›
Poxviridae›
Oryzopoxvirus›
Cotia_virus_SPAn232
TaxID: 930275
Cluster
View cluster (22 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 211-282
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1juqC00 | 1.25.40.90 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.64 | 56.0 | 4.47e-01 | 100.0% | 83.2% |
| 2r5sA02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.63 | 46.0 | 4.38e-01 | 79.2% | 80.7% |
| 3dzaA01 | 1.20.120.1940 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YfdX protein domain | 0.62 | 44.0 | 3.75e-01 | 75.0% | 82.1% |
| 2dlrA00 | 1.10.167.10 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 | 0.55 | 38.0 | 2.98e-01 | 70.8% | 40.9% |
| 3bf7A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.53 | 41.0 | 2.91e-01 | 86.1% | 82.0% |
| 2a3qA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.51 | 42.0 | 3.67e-01 | 93.1% | 80.5% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3216270 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.66 | 57.0 | 4.16e-01 | 100.0% | 41.9% |
| 3867255 | 109.4.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Arm | 0.64 | 51.0 | 4.69e-01 | 91.7% | 92.0% |
| 3277865 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.63 | 50.0 | 4.09e-01 | 87.5% | 72.6% |
| 3993797 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.61 | 51.0 | 4.49e-01 | 100.0% | 94.8% |
| 3781354 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.58 | 49.0 | 3.61e-01 | 98.6% | 46.5% |
| 3819779 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 44.0 | 3.96e-01 | 91.7% | 98.2% |
| 4997374 | 109.4.1.5 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1 | 0.55 | 45.0 | 3.24e-01 | 100.0% | 40.4% |
| 3922008 | 101.1.1.97 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF4806 | 0.55 | 42.0 | 3.79e-01 | 86.1% | 90.5% |
| 3426927 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.53 | 44.0 | 3.98e-01 | 98.6% | 89.5% |
| 3198858 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.51 | 35.0 | 3.61e-01 | 73.6% | 82.9% |
D2
medium
residues 283-343
D3
medium
residues 344-427
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ii9B01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.69 | 52.0 | 4.50e-01 | 79.8% | 79.2% |
| 3owaA01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.63 | 48.0 | 4.12e-01 | 82.1% | 73.9% |
| 3p4tA01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.62 | 46.0 | 4.16e-01 | 79.8% | 90.8% |
| 1aa7A02 | 1.10.10.180 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Influenza matrix protein M1, N-terminal subdomain 2 | 0.62 | 45.0 | 4.65e-01 | 77.4% | 85.9% |
| 4irnA01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.59 | 45.0 | 4.10e-01 | 84.5% | 90.8% |
| 4iv6B01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.58 | 44.0 | 4.01e-01 | 82.1% | 90.5% |
| 4f92B10 | 1.10.3380.10 | Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › Sec63 N-terminal domain-like domain | 0.58 | 42.0 | 3.58e-01 | 77.4% | 88.1% |
| 4evfA03 | 1.10.220.10 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin | 0.57 | 41.0 | 4.25e-01 | 76.2% | 93.8% |
| 3beeA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.57 | 40.0 | 3.96e-01 | 81.0% | 68.1% |
| 4psuA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.55 | 43.0 | 3.03e-01 | 86.9% | 43.4% |
| 1usyC00 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.55 | 47.0 | 3.34e-01 | 98.8% | 75.5% |
| 5gz8A00 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.52 | 38.0 | 2.76e-01 | 79.8% | 80.5% |
| 4d7rA01 | 1.10.220.20 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › | 0.52 | 40.0 | 4.03e-01 | 86.9% | 91.5% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3781360 | 627.1.1.1 ↗ | alpha complex topology › VPS9 domain › VPS9 domain › VPS9 domain › VPS9 | 0.62 | 52.0 | 4.09e-01 | 92.9% | 71.4% |
| 3453416 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.60 | 51.0 | 3.27e-01 | 94.0% | 35.3% |
| 5009327 | 109.2.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid | 0.60 | 46.0 | 3.34e-01 | 85.7% | 41.9% |
| 3281461 | 4033.1.1.1 ↗ | alpha arrays › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA_dh_N | 0.60 | 45.0 | 4.04e-01 | 83.3% | 84.8% |
| 3368823 | 4177.2.1.3 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › Inhibitor of kappaB kinase beta dimerization domain › Inhibitor of kappaB kinase beta dimerization domain › SEO_N | 0.57 | 38.0 | 2.79e-01 | 70.2% | 55.2% |
| 3809667 | 109.4.1.1256 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 | 0.57 | 49.0 | 3.20e-01 | 97.6% | 49.5% |
| 3908764 | 109.33.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › TIR domain-containing adapter molecule 1 N-terminal domain › TIR domain-containing adapter molecule 1 N-terminal domain › TRIF-NTD | 0.56 | 44.0 | 3.71e-01 | 86.9% | 49.3% |
| 3368213 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.55 | 44.0 | 3.25e-01 | 88.1% | 48.7% |
| 5060591 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.53 | 40.0 | 3.49e-01 | 84.5% | 77.8% |
| 3669 | 633.16.1.1 ↗ | alpha bundles › Bromodomain-like › PMT helical bundle domain-like › PMT helical bundle domain-like › MLD | 0.51 | 36.0 | 3.46e-01 | 73.8% | 63.3% |
| 54312 | 633.16.1.0 ↗ | alpha bundles › Bromodomain-like › PMT helical bundle domain-like › PMT helical bundle domain-like | 0.50 | 35.0 | 3.43e-01 | 73.8% | 63.9% |
D4
medium
residues 428-479
Domain cluster:
representative
D5
medium
residues 592-685
Domain cluster:
rep: E2L_OIL-like_protein__YP_784252__Nile_crocodilepox_virus__1285600__D632-727