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hypothetical_protein_CRV056
Euk-VirNile_crocodilepox_virus
hypothetical_protein_CRV056__YP_784247__Nile_crocodilepox_virus__1285600
Identity
- Accession:
- YP_784247 ↗
- Protein ID:
- hypothetical_protein_CRV056
- Kingdom:
- euk
Quality
82.5
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Pokkesviricetes›
Chitovirales›
Poxviridae›
Crocodylidpoxvirus›
Nile_crocodilepox_virus
TaxID: 1285600
Cluster
View cluster (29 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 132-162_399-457
Domain cluster:
rep: Virion_protein__YP_009408442__NY_014_poxvirus__2025360__D138-162_405-445
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04656.19 best | Pox_E6 | 54.9 | 8.00e-15 | 65.6% | 10.1% |
| PF04656.19 | Pox_E6 | 33.3 | 2.70e-08 | 38.9% | 5.5% |
D2
high
residues 168-310_364-391
Domain cluster:
rep: hypothetical_protein_HM89_gp100__YP_009046330__Pigeonpox_virus__10264__D163-309_366-406
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04656.19 best | Pox_E6 | 215.9 | 1.30e-63 | 84.2% | 24.9% |
D3
medium
residues 1-115
Domain cluster:
rep: MC037R__NP_043988__Molluscum_contagiosum_virus_subtype_1__10280__D1-143
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04656.19 best | Pox_E6 | 154.0 | 7.40e-45 | 100.0% | 20.3% |
D4
medium
residues 311-363
D5
medium
residues 488-566
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04656.19 best | Pox_E6 | 73.4 | 1.90e-20 | 100.0% | 14.0% |
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ygwA01 | 1.20.140.90 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Malonyl-CoA decarboxylase, oligemerization domain | 0.64 | 55.0 | 4.47e-01 | 96.2% | 86.3% |
| 2eh3A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.63 | 46.0 | 4.07e-01 | 79.7% | 94.3% |
| 1bucA01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.62 | 44.0 | 3.86e-01 | 74.7% | 77.2% |
| 3pntB00 | 1.25.40.520 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.62 | 54.0 | 4.35e-01 | 100.0% | 63.1% |
| 3l9tA02 | 1.25.40.290 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › ARM repeat domains | 0.61 | 51.0 | 4.55e-01 | 96.2% | 97.5% |
| 1l6hA00 | 1.10.110.10 | Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › Plant lipid-transfer and hydrophobic proteins | 0.60 | 41.0 | 4.29e-01 | 70.9% | 91.3% |
| 5djsA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.58 | 46.0 | 3.78e-01 | 87.3% | 47.6% |
| 3gs3A00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.58 | 47.0 | 3.42e-01 | 93.7% | 51.0% |
| 6tblB01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.57 | 46.0 | 4.21e-01 | 91.1% | 77.5% |
| 3o2tA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.57 | 47.0 | 3.28e-01 | 96.2% | 63.5% |
| 2q0oC00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.56 | 34.0 | 3.36e-01 | 100.0% | 54.7% |
| 3e54A00 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.56 | 40.0 | 3.30e-01 | 77.2% | 76.7% |
| 2ynqB00 | 1.25.40.680 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Type VII secretion system EssB, C-terminal-like domain | 0.54 | 43.0 | 3.58e-01 | 89.9% | 47.0% |
| 2l6jA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.50 | 37.0 | 3.41e-01 | 92.4% | 57.7% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3783773 | 109.4.1.32 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MIF4G | 0.65 | 56.0 | 3.44e-01 | 98.7% | 30.7% |
| 5052410 | 109.4.1.257 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PDS5 | 0.64 | 54.0 | 3.40e-01 | 96.2% | 28.2% |
| 3573255 | 109.27.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain | 0.60 | 41.0 | 4.11e-01 | 70.9% | 75.0% |
| 3209285 | 109.4.1.791 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_17 | 0.59 | 40.0 | 3.78e-01 | 82.3% | 57.9% |
| 3697212 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.56 | 46.0 | 2.84e-01 | 96.2% | 14.9% |
| 3945098 | 109.4.1.924 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_CcmH_CycH | 0.54 | 43.0 | 4.00e-01 | 94.9% | 68.6% |
| 3441635 | 109.4.1.1848 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_10, TPR_19 | 0.53 | 43.0 | 2.91e-01 | 89.9% | 38.7% |
| 3997797 | 2003.1.5.73 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_16 | 0.53 | 43.0 | 3.30e-01 | 89.9% | 38.4% |