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hypothetical_protein_CaLGV087

Euk-Vir

Clostera_anastomosis_granulovirus_Henan

hypothetical_protein_CaLGV087__YP_008720034__Clostera_anastomosis_granulovirus_Henan__1986291

Identity

Accession:
YP_008720034 ↗
Protein ID:
hypothetical_protein_CaLGV087
Kingdom:
euk

Quality

55.0 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Betabaculovirus› Clostera_anastomosis_granulovirus_Henan

TaxID: 1986291

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 153-188
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13920.13 best zf-C3HC4_3 28.0 2.20e-06 86.1% 65.3%
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4aycA02 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.90 81.0 6.04e-01 100.0% 44.6%
5aiuA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.87 76.0 5.16e-01 100.0% 30.1%
2csyA01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.86 74.0 6.28e-01 100.0% 63.3%
5dinA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.85 72.0 5.00e-01 100.0% 32.5%
1z6uA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.83 71.0 4.99e-01 100.0% 36.5%
ECOD (28)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3527973 376.1.1.29 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_4 0.89 79.0 5.79e-01 100.0% 46.7%
4463766 376.1.1.23 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 0.89 78.0 5.86e-01 100.0% 45.9%
3878373 376.1.1.27 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 0.89 78.0 6.23e-01 100.0% 58.6%
4013596 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.88 78.0 5.84e-01 100.0% 45.9%
3223486 376.1.1.27 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 0.88 81.0 6.32e-01 100.0% 52.9%
3888691 376.1.1.20 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX 0.88 77.0 5.78e-01 100.0% 48.2%
3591945 376.1.1.17 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-rbx1 0.88 74.0 6.39e-01 97.2% 61.8%
3242811 376.1.1.1 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.88 78.0 5.54e-01 100.0% 37.0%
None — 0.88 78.0 6.06e-01 100.0% 54.7%
3763028 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.87 76.0 5.76e-01 100.0% 47.1%
3887832 376.1.1.23 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 0.87 77.0 6.01e-01 100.0% 54.7%
3993380 376.1.1.27 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 0.87 76.0 6.11e-01 100.0% 58.6%
4024061 376.1.1.20 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX 0.87 76.0 5.63e-01 100.0% 42.2%
4211249 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.87 77.0 6.27e-01 100.0% 78.5%
3225801 376.1.1.27 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 0.86 75.0 4.88e-01 100.0% 24.7%
3607912 376.1.1.22 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 0.85 73.0 6.42e-01 100.0% 69.1%
3228846 376.1.1.27 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 0.84 73.0 5.87e-01 100.0% 54.3%
3246875 376.1.1.27 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 0.84 70.0 5.44e-01 100.0% 43.8%
3926480 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.84 72.0 6.78e-01 100.0% 91.1%
3991593 376.1.1.20 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX 0.82 70.0 5.98e-01 100.0% 65.0%
3236023 376.1.1.27 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 0.81 68.0 5.26e-01 100.0% 44.7%
3571066 376.1.1.27 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 0.78 64.0 5.27e-01 100.0% 50.0%
3919225 376.1.1.20 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX 0.78 60.0 4.05e-01 100.0% 22.0%
4012176 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.76 61.0 4.60e-01 100.0% 43.0%
3620336 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.75 57.0 5.79e-01 94.4% 94.3%
5000735 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.65 48.0 3.27e-01 100.0% 19.4%
4618381 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.52 38.0 3.85e-01 100.0% 87.5%
4571011 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.52 39.0 3.89e-01 97.2% 87.5%
D2 medium residues 1-68
PDB