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hypothetical_protein_CaV1gp07

Euk-Vir

Canine_mastadenovirus_A

hypothetical_protein_CaV1gp07__NP_044189__Canine_mastadenovirus_A__10537

Identity

Accession:
NP_044189 ↗
Protein ID:
hypothetical_protein_CaV1gp07
Kingdom:
euk

Quality

88.0 mean pLDDT

Taxonomy

Bamfordvirae› Preplasmiviricota› Pharingeaviricetes› Rowavirales› Adenoviridae› Mastadenovirus› Canine_mastadenovirus_A

TaxID: 10537

Cluster

View cluster (24 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 45-121_189-230
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4fvmA03 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.54 48.0 3.78e-01 95.0% 65.4%
4qclA03 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.54 48.0 3.65e-01 95.8% 89.7%
ECOD (20)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4988258 5104.1.1.0 ↗ a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases 0.60 39.0 3.96e-01 80.7% 65.0%
4935884 2484.1.1.34 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 0.58 54.0 3.65e-01 100.0% 38.5%
3683241 2484.1.1.34 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 0.57 52.0 3.75e-01 96.6% 50.9%
2958185 2484.1.1.34 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 0.57 51.0 3.83e-01 96.6% 54.8%
3193111 2484.1.1.34 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 0.56 52.0 3.61e-01 100.0% 50.8%
4378664 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.56 46.0 3.54e-01 88.2% 57.7%
3702504 2484.1.1.34 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 0.56 50.0 3.69e-01 96.6% 50.5%
3597964 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.55 49.0 3.60e-01 96.6% 49.2%
1790898 2484.1.1.34 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 0.55 50.0 3.75e-01 97.5% 89.7%
4874454 2.1.1.25 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_pol_B_exo1 0.54 49.0 3.70e-01 95.8% 90.6%
5056954 305.1.1.0 ↗ a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase 0.54 34.0 4.11e-01 79.0% 98.7%
3775744 883.1.1.2 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP_C 0.54 31.0 3.14e-01 73.9% 54.0%
3402227 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.53 47.0 3.75e-01 93.3% 99.6%
3692564 2.1.1.25 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_pol_B_exo1 0.53 48.0 3.32e-01 100.0% 46.8%
3175633 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.53 44.0 3.66e-01 88.2% 53.7%
3640508 207.11.1.1 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD 0.52 45.0 3.43e-01 95.0% 95.5%
4030050 11.1.5.7 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Adap_comp_sub 0.52 39.0 3.54e-01 79.8% 71.5%
3167764 2484.1.1.34 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 0.51 45.0 3.40e-01 99.2% 85.2%
3251998 242.1.1.1 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 0.50 38.0 4.05e-01 87.4% 92.4%
3711482 2484.1.1.13 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T 0.50 43.0 3.48e-01 92.4% 93.3%
D2 medium residues 122-188_231-277
PDB
Domain cluster: rep: DNA_polymerase__YP_002213831__Human_mastadenovirus_B__108098__D339-408_426-491
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03175.19 best DNA_pol_B_2 27.8 1.80e-06 46.5% 11.3%
D3 medium residues 426-477_745-862_951-977
PDB
Domain cluster: rep: NC_004735.1__NP_835679.1__Rm378p092__00092__D1-33_185-289
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03175.19 best DNA_pol_B_2 73.0 3.30e-20 34.5% 11.8%
D4 medium residues 478-582
PDB
Domain cluster: rep: DNA_polymerase__NP_040516__Human_mastadenovirus_C__129951__D703-805
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03175.19 best DNA_pol_B_2 90.4 1.70e-25 100.0% 19.4%
D5 medium residues 625-674_731-744
PDB
Domain cluster: rep: DNA_polymerase__YP_009246419__Bat_mastadenovirus_WIV11__1788433__D804-841_908-928
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03175.19 best DNA_pol_B_2 27.7 1.90e-06 98.4% 12.2%
D6 medium residues 863-950
PDB
Domain cluster: rep: DNA_polymerase__YP_006383556__Goose_adenovirus_4__1193422__D1120-1209