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hypothetical_protein_CaV1gp18

Euk-Vir

Canine_mastadenovirus_A

hypothetical_protein_CaV1gp18__NP_044200__Canine_mastadenovirus_A__10537

Identity

Accession:
NP_044200 ↗
Protein ID:
hypothetical_protein_CaV1gp18
Kingdom:
euk

Quality

83.2 mean pLDDT

Taxonomy

Bamfordvirae› Preplasmiviricota› Pharingeaviricetes› Rowavirales› Adenoviridae› Mastadenovirus› Canine_mastadenovirus_A

TaxID: 10537

Cluster

View cluster (53 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 137-193
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02236.24 best Viral_DNA_bi 67.7 1.30e-18 100.0% 68.3%
CATH (27)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1fs0G02 1.10.287.80 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain 0.73 50.0 4.31e-01 71.9% 46.1%
3keyA01 1.10.10.1080 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Stn1, N-terminal wHTH domain 0.69 59.0 5.23e-01 100.0% 93.1%
2bskB00 1.10.287.810 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Mitochondrial import inner membrane translocase subunit tim13 like domains 0.68 47.0 4.48e-01 71.9% 96.9%
2w43A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.67 49.0 4.97e-01 93.0% 78.9%
1rm6B02 3.30.390.50 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain 0.67 50.0 4.07e-01 96.5% 43.0%
2id3A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.67 43.0 4.60e-01 77.2% 77.6%
1oizA01 1.10.8.20 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › N-terminal domain of phosphatidylinositol transfer protein sec14p 0.65 50.0 4.69e-01 86.0% 75.0%
1sg6A02 1.20.1090.10 Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain 0.63 53.0 3.67e-01 94.7% 79.7%
1pd3A00 1.10.287.230 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.62 45.0 4.67e-01 96.5% 81.5%
2kg7B00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.60 44.0 3.75e-01 78.9% 50.5%
6t4hA03 1.10.3060.10 Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA 0.60 52.0 3.72e-01 98.2% 45.9%
4a17U01 1.10.287.310 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.59 41.0 3.66e-01 71.9% 70.1%
1nktA04 1.10.3060.10 Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA 0.59 49.0 3.43e-01 89.5% 92.1%
2fsfB04 1.10.3060.10 Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA 0.59 50.0 3.44e-01 96.5% 42.0%
3l8kA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 51.0 3.50e-01 100.0% 37.8%
2c2aA01 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.57 41.0 3.51e-01 75.4% 71.1%
3bg2A01 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.57 46.0 3.28e-01 93.0% 51.3%
5k2xA00 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.57 50.0 2.97e-01 96.5% 83.6%
1gvfB00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.57 50.0 3.21e-01 100.0% 92.4%
2e62A01 6.10.140.420 Special › Helix non-globular › Helix Hairpins › 0.57 41.0 4.23e-01 78.9% 84.6%
1ij5A01 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.55 41.0 3.73e-01 78.9% 96.1%
1k07A00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.55 46.0 3.02e-01 96.5% 21.8%
3pmiA02 6.10.300.20 Special › Helix non-globular › cAMP-dependent Protein Kinase, Chain A › 0.54 42.0 4.49e-01 100.0% 100.0%
2hgkA01 1.20.1440.40 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › YqcC-like 0.54 44.0 3.73e-01 96.5% 100.0%
2jqqA00 1.20.58.1240 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.53 45.0 3.37e-01 98.2% 98.1%
2pmrA00 1.20.1270.90 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like 0.51 45.0 4.05e-01 94.7% 85.5%
4py6C00 1.20.920.10 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like 0.50 40.0 3.22e-01 93.0% 97.6%
ECOD (25)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1118996 510.1.1.1 ↗ alpha bundles › Domain of early E2A DNA-binding protein, ADDBP › Domain of early E2A DNA-binding protein, ADDBP › Domain of early E2A DNA-binding protein, ADDBP › Viral_DNA_bi 0.94 85.0 7.12e-01 100.0% 61.1%
3191012 103.4.1.2 ↗ alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › TFIIS_M 0.71 60.0 4.96e-01 94.7% 53.3%
4969772 2007.1.11.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › L-fucose isomerase, N-terminal and second domains 0.67 57.0 4.23e-01 94.7% 37.9%
4584784 4993.1.1.3 ↗ extended segments › Glu-tRNAGln amidotransferase C subunit › Glu-tRNAGln amidotransferase C subunit › Glu-tRNAGln amidotransferase C subunit › GatF 0.67 55.0 4.20e-01 91.2% 42.3%
3173183 101.1.2.134 ↗ alpha arrays › HTH › HTH › winged helix domain › Stn1_C 0.66 56.0 4.93e-01 100.0% 90.0%
4302123 2003.1.5.107 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › AdoMet_MTase 0.66 53.0 3.68e-01 91.2% 38.5%
5035231 4168.1.1.1 ↗ alpha duplicates or obligate multimers › HAMP domain › HAMP domain › HAMP domain › HAMP 0.64 42.0 4.34e-01 96.5% 70.9%
3319076 103.4.1.0 ↗ alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein 0.63 46.0 3.93e-01 94.7% 48.9%
3171253 109.4.1.356 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans 0.62 50.0 2.93e-01 98.2% 9.4%
4465832 589.1.2.1 ↗ alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › TF C-terminus (Pfam 05698) › Trigger_C 0.60 53.0 3.69e-01 98.2% 97.4%
3478767 610.3.1.1 ↗ alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey 0.60 50.0 3.38e-01 93.0% 42.3%
3201716 622.1.1.7 ↗ alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain › DUF7607 0.59 40.0 3.24e-01 71.9% 37.3%
3193842 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.58 52.0 4.04e-01 100.0% 72.0%
3640760 3291.1.1.17 ↗ alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › DUF202 0.58 43.0 3.39e-01 78.9% 40.0%
4527330 7010.1.1.0 ↗ alpha arrays › Activation-binding domain of RNA polymerase II mediator › Activation-binding domain of RNA polymerase II mediator › Activation-binding domain of RNA polymerase II mediator 0.57 45.0 4.37e-01 96.5% 80.0%
3308985 632.7.1.1 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 0.57 46.0 3.73e-01 98.2% 49.0%
4939437 2003.1.1.9 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › AdoHcyase_NAD 0.57 43.0 2.96e-01 100.0% 21.4%
4247463 109.4.1.1145 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › IQ 0.55 49.0 2.83e-01 100.0% 21.1%
3173112 1203.1.2.4 ↗ alpha bundles › Shroom domain 2 › Shroom domain 2 › Human SD2 › Vps55 0.55 41.0 3.14e-01 80.7% 80.7%
3683441 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.54 48.0 3.17e-01 100.0% 54.9%
3635704 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.53 44.0 3.30e-01 96.5% 34.4%
3883768 5086.1.1.101 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › SH3BP5 0.53 41.0 3.15e-01 96.5% 37.6%
5032595 2004.1.1.42 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE 0.52 42.0 2.54e-01 96.5% 49.1%
5031872 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 35.0 3.51e-01 75.4% 70.0%
4957624 5045.1.1.0 ↗ alpha bundles › F1F0 ATP synthase subunit A › F1F0 ATP synthase subunit A › F1F0 ATP synthase subunit A 0.50 46.0 3.09e-01 100.0% 41.0%
D2 medium residues 194-208_281-349_371-440
PDB
Domain cluster: rep: DBP__YP_009162599__Skunk_adenovirus_PB1__1641642__D183-206_246-418
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03728.19 best Viral_DNA_Zn_bi 38.0 2.80e-09 31.8% 46.9%
D3 medium residues 220-280
PDB
Domain cluster: rep: DBP__YP_007347008__Bovine_adenovirus_6__111167__D124-183
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03728.19 best Viral_DNA_Zn_bi 39.2 1.20e-09 100.0% 58.2%