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hypothetical_protein_CalGV040
Euk-VirClostera_anastomosis_granulovirus_Henan
hypothetical_protein_CalGV040__YP_008719988__Clostera_anastomosis_granulovirus_Henan__1986291
Identity
- Accession:
- YP_008719988 ↗
- Protein ID:
- hypothetical_protein_CalGV040
- Kingdom:
- euk
Quality
55.3
mean pLDDT
Taxonomy
Naldaviricetes›
Lefavirales›
Baculoviridae›
Betabaculovirus›
Clostera_anastomosis_granulovirus_Henan
TaxID: 1986291
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 283-385
Domain cluster:
rep: BV_ODV-E26__YP_009666490__Lonomia_obliqua_multiple_nucleopolyhedrovirus__134394__D138-232
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1pjqB05 | 3.30.950.10 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain | 0.69 | 40.0 | 3.78e-01 | 73.8% | 46.8% |
| 1lxjA00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.67 | 45.0 | 4.52e-01 | 87.4% | 68.0% |
| 1s4dE02 | 3.30.950.10 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain | 0.64 | 40.0 | 3.65e-01 | 71.8% | 46.0% |
| 4mo0A00 | 3.30.780.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain | 0.63 | 44.0 | 4.88e-01 | 95.1% | 93.7% |
| 4iajA00 | 3.30.1490.390 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Protein of unknown function DUF4649 | 0.63 | 33.0 | 3.77e-01 | 96.1% | 68.4% |
| 5zyrA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 35.0 | 3.08e-01 | 79.6% | 41.1% |
| 4i2oA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 39.0 | 4.31e-01 | 80.6% | 90.0% |
| 2fmyA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 40.0 | 4.45e-01 | 80.6% | 92.7% |
| 5trdA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 36.0 | 3.97e-01 | 78.6% | 79.8% |
| 2eyqA07 | 3.90.1150.50 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Transcription-repair-coupling factor, D7 domain | 0.56 | 39.0 | 3.51e-01 | 93.2% | 51.0% |
| 4kibA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 37.0 | 3.85e-01 | 88.3% | 71.7% |
| 1bjaA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 34.0 | 3.52e-01 | 79.6% | 65.3% |
| 1lnwF01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 33.0 | 3.17e-01 | 80.6% | 50.8% |
| 6uvuA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 34.0 | 3.46e-01 | 80.6% | 63.5% |
| 3gqcC01 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.53 | 43.0 | 3.94e-01 | 87.4% | 77.4% |
| 1n6zA00 | 3.10.20.250 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › YML108W-like | 0.52 | 43.0 | 4.34e-01 | 91.3% | 98.1% |
| 3fxqB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 33.0 | 3.54e-01 | 80.6% | 75.6% |
| 2v5yA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 34.0 | 3.44e-01 | 100.0% | 69.6% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3284116 | 304.56.1.5 ↗ | a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like › PaaX_M | 0.74 | 42.0 | 4.95e-01 | 86.4% | 81.4% |
| 4538391 | 1137.1.1.1 ↗ | a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain › TP_methylase | 0.70 | 44.0 | 3.86e-01 | 72.8% | 43.3% |
| 3613416 | 821.1.1.3 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › T5orf172 | 0.68 | 59.0 | 5.64e-01 | 96.1% | 85.8% |
| 5031084 | 304.56.1.0 ↗ | a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like | 0.67 | 38.0 | 4.36e-01 | 85.4% | 76.0% |
| 3291691 | 4340.1.1.0 ↗ | a+b complex topology › TFB5-related › TFB5-related › TFB5-related | 0.67 | 34.0 | 4.52e-01 | 78.6% | 100.0% |
| 3735748 | 821.1.1.3 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › T5orf172 | 0.66 | 57.0 | 4.83e-01 | 95.1% | 63.5% |
| 3950768 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.65 | 34.0 | 4.11e-01 | 77.7% | 78.5% |
| 3388590 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.65 | 34.0 | 4.25e-01 | 71.8% | 85.0% |
| 3954581 | 304.22.1.0 ↗ | a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain | 0.64 | 34.0 | 4.14e-01 | 77.7% | 81.5% |
| 4974123 | 821.1.1.14 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › DUF2797 | 0.61 | 52.0 | 5.30e-01 | 100.0% | 95.0% |
| 3639700 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.61 | 51.0 | 3.51e-01 | 89.3% | 72.8% |
| 4870269 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 36.0 | 4.44e-01 | 100.0% | 96.8% |
| 5039344 | 821.1.1.0 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.60 | 41.0 | 4.45e-01 | 71.8% | 87.1% |
| 3997738 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 32.0 | 3.48e-01 | 75.7% | 65.9% |
| 3798134 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.56 | 40.0 | 4.27e-01 | 87.4% | 86.7% |
| 3397043 | 306.5.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › GTP cyclohydrolase I feedback regulatory protein, GFRP › GTP cyclohydrolase I feedback regulatory protein, GFRP | 0.55 | 40.0 | 4.48e-01 | 95.1% | 98.8% |
| 2613 | 101.1.2.105 ↗ | alpha arrays › HTH › HTH › winged helix domain › MotA_activ | 0.55 | 34.0 | 3.52e-01 | 79.6% | 65.3% |
| 163606 | 101.1.2.142 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_Crp_2 | 0.55 | 39.0 | 4.30e-01 | 81.6% | 93.8% |
| 3562570 | 306.10.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › H1 domain of KCTD12 › H1 domain of KCTD12 | 0.52 | 47.0 | 4.24e-01 | 100.0% | 85.7% |
| 3264673 | 101.1.2.498 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF25870 | 0.52 | 34.0 | 3.13e-01 | 100.0% | 51.5% |
D2
medium
residues 1-86
Domain cluster:
rep: PrGVORF24__YP_003429348__Artogeia_rapae_granulovirus__362830__D4-79
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3nymA00 | 6.10.290.10 | Special › Helix non-globular › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.78 | 41.0 | 3.63e-01 | 83.7% | 36.3% |
| 3ceqA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.76 | 59.0 | 4.15e-01 | 81.4% | 58.4% |
| 4g1tA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.75 | 57.0 | 5.00e-01 | 79.1% | 79.7% |
| 8amzT01 | 1.25.40.990 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.75 | 51.0 | 3.55e-01 | 70.9% | 30.7% |
| 3qwwA03 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.74 | 54.0 | 4.16e-01 | 76.7% | 56.0% |
| 2jg0A00 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.72 | 53.0 | 3.22e-01 | 76.7% | 40.8% |
| 8d0vA01 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.72 | 56.0 | 3.61e-01 | 83.7% | 29.7% |
| 8fnyA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.71 | 49.0 | 3.65e-01 | 72.1% | 31.6% |
| 3qnkC00 | 1.25.40.390 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.69 | 53.0 | 3.23e-01 | 80.2% | 32.9% |
| 2gz6A00 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.69 | 54.0 | 3.52e-01 | 83.7% | 35.8% |
| 3i4gA00 | 1.25.40.390 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.69 | 52.0 | 3.20e-01 | 80.2% | 28.8% |
| 1w3bB00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.68 | 48.0 | 3.14e-01 | 73.3% | 23.9% |
| 7e9uA01 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.68 | 55.0 | 3.41e-01 | 84.9% | 61.7% |
| 4gywA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.68 | 48.0 | 4.49e-01 | 73.3% | 82.9% |
| 2chpA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.63 | 43.0 | 3.66e-01 | 70.9% | 98.6% |
| 2ondA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.61 | 52.0 | 3.63e-01 | 98.8% | 69.8% |
| 2fonA04 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.57 | 43.0 | 3.88e-01 | 82.6% | 72.9% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3397519 | 109.4.1.386 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Rapsyn_N | 0.81 | 56.0 | 3.49e-01 | 70.9% | 15.4% |
| 4019009 | 109.4.1.777 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.80 | 60.0 | 5.15e-01 | 77.9% | 83.1% |
| 3726128 | 109.4.1.777 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.80 | 55.0 | 5.32e-01 | 70.9% | 75.8% |
| 4011834 | 109.4.1.777 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.79 | 59.0 | 4.22e-01 | 77.9% | 46.3% |
| 4022979 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.79 | 58.0 | 4.09e-01 | 76.7% | 45.7% |
| 3685975 | 3924.1.1.1 ↗ | alpha complex topology › Sterol uptake control protein 2 › Sterol uptake control protein 2 › Sterol uptake control protein 2 › Fungal_trans_2 | 0.77 | 55.0 | 4.16e-01 | 73.3% | 71.4% |
| 3256078 | 109.4.1.2377 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, TPR_8, TPR_10, TPR_12 | 0.76 | 54.0 | 4.17e-01 | 72.1% | 59.4% |
| 3920385 | 109.4.1.1320 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_7, TPR_10, TPR_12 | 0.76 | 52.0 | 3.35e-01 | 70.9% | 18.9% |
| 3689557 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.75 | 55.0 | 4.35e-01 | 76.7% | 81.2% |
| 2093855 | 109.4.1.1286 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_12 | 0.74 | 54.0 | 4.25e-01 | 75.6% | 62.6% |
| 3608673 | 109.4.1.194 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_10 | 0.74 | 53.0 | 3.43e-01 | 73.3% | 31.6% |
| 3648183 | 109.4.1.142 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CSN8_PSD8_EIF3K | 0.74 | 51.0 | 3.82e-01 | 70.9% | 57.6% |
| 4540558 | 109.4.1.142 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CSN8_PSD8_EIF3K | 0.74 | 51.0 | 3.76e-01 | 70.9% | 35.8% |
| 4019841 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.73 | 54.0 | 4.13e-01 | 76.7% | 81.1% |
| 3596405 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.72 | 50.0 | 4.42e-01 | 72.1% | 84.8% |
| 3207548 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.70 | 42.0 | 3.51e-01 | 90.7% | 36.4% |
| 4117498 | 4177.1.1.96 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › MSP1_C | 0.68 | 54.0 | 3.59e-01 | 87.2% | 73.4% |
| 5003253 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.67 | 47.0 | 3.52e-01 | 74.4% | 53.6% |
| 3741876 | 109.4.1.43 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SAC3_GANP | 0.61 | 46.0 | 3.25e-01 | 80.2% | 61.5% |
| 4809272 | 3291.1.1.4 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › PspA_IM30 | 0.60 | 43.0 | 3.82e-01 | 74.4% | 61.2% |
| 3620006 | 109.4.1.142 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CSN8_PSD8_EIF3K | 0.60 | 42.0 | 3.06e-01 | 73.3% | 43.1% |
| 3518225 | 109.4.1.292 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › eIF3a_PCI_TPR-like | 0.59 | 42.0 | 2.70e-01 | 75.6% | 35.6% |