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hypothetical_protein_D1R28_gp072
Euk-VirBohle_iridovirus
hypothetical_protein_D1R28_gp072__YP_009506730__Bohle_iridovirus__100220
Identity
- Accession:
- YP_009506730 ↗
- Protein ID:
- hypothetical_protein_D1R28_gp072
- Kingdom:
- euk
Quality
69.6
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Pimascovirales›
Iridoviridae›
Ranavirus›
Bohle_iridovirus
TaxID: 100220
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 15-90
Domain cluster:
representative
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2fi1A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.79 | 45.0 | 4.87e-01 | 85.5% | 67.2% |
| 3t38A01 | 1.10.8.1060 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Corynebacterium glutamicum thioredoxin-dependent arsenate reductase, N-terminal domain | 0.68 | 57.0 | 5.94e-01 | 98.7% | 95.8% |
| 3ddhA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.66 | 48.0 | 4.77e-01 | 86.8% | 72.8% |
| 1gvfB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.65 | 55.0 | 3.78e-01 | 94.7% | 90.5% |
| 2f2cA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.65 | 49.0 | 4.42e-01 | 94.7% | 57.8% |
| 4rocA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.65 | 52.0 | 4.71e-01 | 97.4% | 65.0% |
| 1rp3A01 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.64 | 52.0 | 5.09e-01 | 94.7% | 82.4% |
| 3u61D03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.63 | 45.0 | 4.26e-01 | 96.1% | 62.6% |
| 2om6A02 | 1.10.150.400 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.63 | 48.0 | 4.78e-01 | 88.2% | 79.7% |
| 2no4A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.62 | 47.0 | 4.76e-01 | 97.4% | 82.7% |
| 3f75P00 | 1.10.287.2250 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.62 | 51.0 | 5.16e-01 | 93.4% | 92.0% |
| 2w02B01 | 1.10.150.640 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › AcsD, thumb domain, helical bundle | 0.61 | 33.0 | 3.39e-01 | 93.4% | 54.1% |
| 3spcA02 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.61 | 44.0 | 3.67e-01 | 75.0% | 62.2% |
| 3cxbA03 | 1.10.1740.30 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › Secreted effector protein SifA helical domain | 0.61 | 51.0 | 5.04e-01 | 94.7% | 87.7% |
| 4gx0A01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.60 | 43.0 | 3.93e-01 | 75.0% | 58.3% |
| 3qnmA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.60 | 47.0 | 4.53e-01 | 88.2% | 74.4% |
| 2lfwA01 | 1.20.140.160 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain | 0.60 | 50.0 | 4.19e-01 | 96.1% | 58.2% |
| 4qicC01 | 1.20.140.160 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain | 0.59 | 48.0 | 4.18e-01 | 96.1% | 56.8% |
| 3vibA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.58 | 48.0 | 3.70e-01 | 96.1% | 39.9% |
| 7lwzB01 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.57 | 45.0 | 3.44e-01 | 86.8% | 53.7% |
| 3t0yA01 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.57 | 43.0 | 4.53e-01 | 88.2% | 93.9% |
| 6ig5A01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.57 | 45.0 | 3.77e-01 | 89.5% | 52.2% |
| 2wb0X01 | 1.10.269.10 | Mainly Alpha › Orthogonal Bundle › Adenovirus Single-stranded Dna-binding Protein, domain 1 › Adenovirus DNA-binding, N-terminal domain | 0.57 | 45.0 | 3.91e-01 | 100.0% | 56.4% |
| 2m4eA00 | 1.20.120.1930 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein PF16691 family | 0.57 | 41.0 | 3.98e-01 | 76.3% | 80.2% |
| 4rflA02 | 1.20.1090.10 | Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain | 0.57 | 48.0 | 3.56e-01 | 94.7% | 70.4% |
| 1n81A00 | 1.10.3030.10 | Mainly Alpha › Orthogonal Bundle › Gametocyte protein Pfg27 › Gametocyte protein Pfg27 | 0.56 | 46.0 | 3.55e-01 | 94.7% | 68.8% |
| 4o1jA00 | 3.40.1050.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-carbonic Anhydrase; Chain A › Carbonic anhydrase | 0.55 | 41.0 | 3.10e-01 | 80.3% | 63.5% |
| 2fp1B00 | 1.20.59.10 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase | 0.55 | 48.0 | 3.80e-01 | 100.0% | 79.3% |
| 2j3tD01 | 3.30.450.70 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.54 | 44.0 | 3.70e-01 | 97.4% | 50.7% |
| 1t9xA05 | 1.20.1640.10 | Mainly Alpha › Up-down Bundle › Multidrug efflux transporter AcrB transmembrane fold › Multidrug efflux transporter AcrB transmembrane domain | 0.54 | 46.0 | 3.35e-01 | 96.1% | 42.3% |
| 4ol8B03 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.54 | 37.0 | 3.57e-01 | 72.4% | 85.6% |
| 5ts9B00 | 1.20.59.10 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase | 0.53 | 44.0 | 3.60e-01 | 96.1% | 78.9% |
| 3npiB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.53 | 44.0 | 3.32e-01 | 97.4% | 69.5% |
| 1ax8A00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.51 | 39.0 | 3.29e-01 | 82.9% | 83.1% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3067828 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.66 | 54.0 | 5.42e-01 | 100.0% | 91.0% |
| 4233279 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.64 | 53.0 | 3.79e-01 | 94.7% | 50.0% |
| 3791227 | 4009.1.1.0 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins | 0.64 | 48.0 | 4.83e-01 | 92.1% | 80.8% |
| 3371195 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.63 | 52.0 | 4.84e-01 | 94.7% | 75.0% |
| 4014515 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.63 | 48.0 | 4.44e-01 | 81.6% | 74.7% |
| 3501345 | 162.1.1.0 ↗ | alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD | 0.62 | 53.0 | 4.76e-01 | 100.0% | 97.4% |
| 5029389 | 601.17.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Group V grass pollen allergen › Group V grass pollen allergen | 0.61 | 50.0 | 4.12e-01 | 92.1% | 96.6% |
| 3283960 | 191.1.1.10 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_6 | 0.61 | 52.0 | 4.41e-01 | 100.0% | 57.6% |
| 3839971 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.60 | 52.0 | 3.85e-01 | 98.7% | 98.1% |
| 3987752 | 162.1.1.2 ↗ | alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PRD_Mga | 0.60 | 53.0 | 4.52e-01 | 100.0% | 88.0% |
| 3700655 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.60 | 52.0 | 4.15e-01 | 100.0% | 60.0% |
| 3889356 | 2006.1.1.18 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 | 0.60 | 48.0 | 3.42e-01 | 98.7% | 28.0% |
| 4930413 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.59 | 42.0 | 3.94e-01 | 75.0% | 65.3% |
| 3442783 | 4952.1.1.0 ↗ | alpha arrays › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like | 0.58 | 48.0 | 4.29e-01 | 97.4% | 63.6% |
| 3962191 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.57 | 49.0 | 4.66e-01 | 100.0% | 82.2% |
| 4967186 | 2006.1.1.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase | 0.57 | 47.0 | 3.40e-01 | 94.7% | 30.4% |
| 3507479 | 148.1.3.264 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › PHO4 | 0.57 | 48.0 | 4.45e-01 | 100.0% | 73.0% |
| 2475211 | 191.1.1.11 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_7 | 0.56 | 46.0 | 3.89e-01 | 88.2% | 59.2% |
| 4030368 | 6155.1.1.5 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › ER_lumen_recept | 0.56 | 45.0 | 3.29e-01 | 90.8% | 54.2% |
| 4974454 | 2006.1.1.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase | 0.55 | 46.0 | 3.28e-01 | 92.1% | 32.3% |
| 3960139 | 191.1.1.26 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_24 | 0.55 | 43.0 | 4.17e-01 | 100.0% | 76.7% |
| 3386119 | 2006.1.1.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.54 | 41.0 | 2.99e-01 | 88.2% | 28.6% |
| 1679631 | 142.1.1.8 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › PhyR_sigma2 | 0.54 | 46.0 | 4.65e-01 | 100.0% | 97.3% |
| 3739228 | 298.1.1.8 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C | 0.54 | 45.0 | 3.07e-01 | 89.5% | 96.0% |
| 5025082 | 7014.1.1.2 ↗ | alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › TauE | 0.53 | 36.0 | 3.19e-01 | 71.1% | 57.4% |
| 3173369 | 5059.1.1.3 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › TPT | 0.51 | 41.0 | 2.70e-01 | 88.2% | 65.1% |
| 4031192 | 632.19.1.3 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Choline binding protein A › Choline binding protein A › DUF1542 | 0.51 | 39.0 | 4.05e-01 | 81.6% | 91.4% |
| 3189960 | 141.1.1.8 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › Terpene_syn_C_2 | 0.50 | 36.0 | 2.48e-01 | 77.6% | 91.9% |