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hypothetical_protein_D1R32_gp061

Euk-Vir

Tunisvirus_fontaine2

hypothetical_protein_D1R32_gp061__YP_009506823__Tunisvirus_fontaine2__1421067

Identity

Accession:
YP_009506823 ↗
Protein ID:
hypothetical_protein_D1R32_gp061
Kingdom:
euk

Quality

73.4 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Marseilleviridae› Losannavirus› Tunisvirus_fontaine2

TaxID: 1421067

Cluster

View cluster (34 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 22-78
PDB
Domain cluster: rep: hypothetical_protein_D1R32_gp201__YP_009506963__Tunisvirus_fontaine2__1421067__D6-75
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF19083.6 best DUF5774 59.9 3.80e-16 96.5% 48.8%
CATH (35)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3sftA00 3.40.50.180 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Methylesterase CheB, C-terminal domain 0.64 41.0 2.82e-01 87.7% 19.6%
4hffA00 3.90.1720.70 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › 0.60 52.0 3.86e-01 100.0% 98.1%
1r94A00 2.60.300.12 Mainly Beta › Sandwich › Hypothetical Protein Aq_1857; Chain: A; › HesB-like domain 0.58 40.0 3.46e-01 73.7% 83.5%
2lfvA00 3.30.70.1070 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat 0.58 40.0 3.39e-01 98.2% 40.6%
4c0kA02 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.56 44.0 3.14e-01 91.2% 91.9%
3l7wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 42.0 3.57e-01 86.0% 50.5%
2nq2D00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 47.0 3.11e-01 100.0% 38.3%
2pn2A00 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.55 39.0 3.02e-01 77.2% 83.9%
1ktgA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.54 44.0 3.52e-01 100.0% 85.4%
3hlzA02 1.20.120.1090 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.54 44.0 3.54e-01 96.5% 71.3%
7jgsG02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 39.0 3.38e-01 78.9% 80.6%
4d10F01 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.54 43.0 3.22e-01 98.2% 34.1%
5cm2Z00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 43.0 3.20e-01 98.2% 87.5%
4ejoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 41.0 3.41e-01 87.7% 59.8%
2v4jB03 3.30.70.20 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 40.0 3.94e-01 100.0% 75.4%
4u04A02 1.10.3290.10 Mainly Alpha › Orthogonal Bundle › Fic-like fold › Fido-like domain 0.53 44.0 3.07e-01 100.0% 34.5%
3qjlA02 3.30.70.1900 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 45.0 3.59e-01 96.5% 90.8%
2e55A00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 38.0 2.76e-01 82.5% 91.8%
1s7mA03 2.20.25.140 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.53 30.0 3.40e-01 70.2% 100.0%
6abqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 39.0 3.41e-01 87.7% 66.0%
3elkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 39.0 3.37e-01 86.0% 65.7%
3lmmA01 3.30.950.30 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Schlafen, AAA domain 0.53 42.0 3.30e-01 100.0% 65.6%
2p4wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 41.0 3.57e-01 94.7% 95.1%
6kf9G01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 40.0 3.57e-01 84.2% 75.6%
2azeB00 6.10.250.540 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.52 31.0 2.61e-01 77.2% 29.7%
2gmhA03 3.30.70.20 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 40.0 3.51e-01 100.0% 54.2%
2zxrA01 2.40.50.460 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.52 39.0 2.88e-01 82.5% 58.2%
1mvfD00 2.10.260.10 Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › 0.51 36.0 3.96e-01 78.9% 100.0%
1l3iA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.51 41.0 3.03e-01 98.2% 80.5%
2hnkA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.51 41.0 2.87e-01 100.0% 75.1%
1z2aA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 37.0 2.71e-01 78.9% 43.3%
4dzrA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.51 41.0 3.12e-01 100.0% 79.1%
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.51 33.0 3.31e-01 98.2% 66.7%
1azpA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.50 36.0 3.42e-01 96.5% 65.2%
4n01A01 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.50 36.0 2.89e-01 98.2% 37.6%
ECOD (34)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3805784 109.4.1.3484 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, E_motif 0.60 40.0 2.90e-01 70.2% 29.4%
5079277 1.1.3.2 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.59 45.0 4.56e-01 94.7% 87.9%
3327381 207.1.1.55 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_8 0.57 40.0 2.19e-01 77.2% 4.6%
3355197 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.57 42.0 3.59e-01 82.5% 54.0%
3381391 207.1.1.55 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_8 0.57 39.0 2.43e-01 89.5% 12.6%
5041315 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.56 42.0 3.69e-01 87.7% 69.0%
3299745 207.1.1.185 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_4, LRR_6 0.56 40.0 2.42e-01 80.7% 11.1%
4996620 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 46.0 4.04e-01 98.2% 82.2%
5055279 1075.1.2.0 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain 0.54 40.0 2.75e-01 98.2% 22.0%
3346465 109.4.1.1371 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, Eplus_motif, E_motif 0.54 41.0 2.43e-01 84.2% 15.0%
3883263 2003.1.5.81 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.54 43.0 3.03e-01 93.0% 75.1%
3254857 389.1.1.0 ↗ few secondary structure elements › EGF-like › EGF-related › EGF/Laminin 0.54 43.0 4.22e-01 86.0% 88.3%
3364252 109.4.1.1331 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_long, E_motif 0.54 40.0 2.53e-01 82.5% 23.1%
5031473 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.54 40.0 3.47e-01 87.7% 69.5%
3837438 109.4.1.1254 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.53 39.0 2.70e-01 82.5% 33.0%
4970612 2003.1.5.82 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 0.53 42.0 2.94e-01 94.7% 90.0%
3377363 109.4.1.1254 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.53 39.0 2.22e-01 82.5% 10.5%
3657246 101.1.2.525 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF7646 0.52 44.0 3.83e-01 100.0% 67.4%
3379110 4070.1.1.2 ↗ alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 0.52 38.0 2.52e-01 78.9% 18.1%
3605370 221.1.1.2 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin 0.52 35.0 3.50e-01 71.9% 68.3%
1148165 3859.1.1.1 ↗ alpha arrays › uncharacterized protein BT_1490 C-terminal domain › uncharacterized protein BT_1490 C-terminal domain › uncharacterized protein BT_1490 C-terminal domain › DUF3806 0.52 42.0 3.37e-01 100.0% 67.7%
3419372 109.4.1.1254 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.52 38.0 2.34e-01 82.5% 18.3%
3684538 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 42.0 3.24e-01 100.0% 78.8%
4081606 6094.1.1.0 ↗ a+b two layers › KS-MAT linker domain in fatty acid synthase › KS-MAT linker domain in fatty acid synthase › KS-MAT linker domain in fatty acid synthase 0.52 36.0 3.21e-01 73.7% 74.1%
4384717 140.1.1.8 ↗ alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › tRNA-synt_1g,Anticodon_3 0.51 40.0 2.74e-01 89.5% 63.1%
3938065 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 38.0 3.55e-01 84.2% 88.0%
3182154 223.2.1.6 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › uDENN 0.51 42.0 2.88e-01 94.7% 77.3%
4947926 4070.1.1.0 ↗ alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like 0.51 36.0 2.49e-01 87.7% 19.6%
3421106 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.51 38.0 2.21e-01 84.2% 11.6%
3201882 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.50 41.0 2.81e-01 96.5% 33.6%
6786 228.1.1.1 ↗ a+b three layers › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Sod_Fe_C 0.50 41.0 3.43e-01 100.0% 90.4%
5071263 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.50 36.0 3.29e-01 84.2% 71.1%
5073431 1075.1.1.0 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain 0.50 42.0 2.47e-01 96.5% 69.7%
4012484 102.1.1.0 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.50 40.0 3.13e-01 98.2% 67.1%
D2 medium residues 79-155
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF19083.6 best DUF5774 39.7 6.80e-10 90.9% 48.8%
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2kk8A01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.62 40.0 4.11e-01 77.9% 69.9%
1wfyA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.56 35.0 3.61e-01 76.6% 66.7%
1vs0A02 3.30.470.30 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme 0.55 44.0 4.03e-01 90.9% 79.1%
3uk2A02 3.30.1300.10 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › Pantoate-beta-alanine ligase, C-terminal domain 0.53 36.0 3.33e-01 85.7% 52.4%
4uabB00 3.40.190.170 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Bacterial extracellular solute-binding protein, family 7 0.52 37.0 2.57e-01 77.9% 65.9%
3axbA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 40.0 2.82e-01 84.4% 62.9%
1jj2L00 3.40.1120.10 Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal protein L15e › Ribosomal protein L15 0.51 40.0 3.03e-01 96.1% 34.5%
4pf6A00 3.40.190.170 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Bacterial extracellular solute-binding protein, family 7 0.50 41.0 2.89e-01 98.7% 77.0%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3375636 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.65 56.0 4.82e-01 100.0% 66.2%
4020684 221.1.1.2 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin 0.64 43.0 4.86e-01 81.8% 98.2%
3203111 221.1.1.2 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin 0.61 41.0 4.64e-01 81.8% 98.2%
3201933 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.61 41.0 3.93e-01 81.8% 60.0%
3420159 221.1.1.44 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Rad60-SLD 0.60 39.0 4.01e-01 79.2% 69.3%
4573861 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.56 36.0 3.95e-01 77.9% 83.3%
4013074 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.53 42.0 3.69e-01 88.3% 55.8%
4682338 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.52 42.0 2.68e-01 92.2% 28.4%
3598190 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 38.0 3.26e-01 80.5% 85.4%