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hypothetical_protein_D1R32_gp407

Euk-Vir

Tunisvirus_fontaine2

hypothetical_protein_D1R32_gp407__YP_009507169__Tunisvirus_fontaine2__1421067

Identity

Accession:
YP_009507169 ↗
Protein ID:
hypothetical_protein_D1R32_gp407
Kingdom:
euk

Quality

80.4 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Marseilleviridae› Losannavirus› Tunisvirus_fontaine2

TaxID: 1421067

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 4-58
PDB
Domain cluster: rep: hypothetical_protein_D1R32_gp483__YP_009507245__Tunisvirus_fontaine2__1421067__D4-62
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00646.39 best F-box 27.1 4.10e-06 72.7% 88.4%
CATH (23)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4i6jB01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.89 60.0 6.72e-01 72.7% 90.5%
5ibkB00 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.76 55.0 5.94e-01 76.4% 91.3%
1fs2A00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.70 64.0 4.04e-01 100.0% 27.4%
3lmmB05 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 47.0 4.56e-01 72.7% 83.6%
2ovrB01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.64 57.0 4.90e-01 100.0% 65.5%
4chuA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 46.0 3.58e-01 78.2% 52.4%
3hhcC00 1.20.1250.60 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › Interferon lambda 0.64 44.0 3.27e-01 74.5% 86.8%
5f42A02 1.20.1180.10 Mainly Alpha › Up-down Bundle › Udp N-acetylglucosamine O-acyltransferase; Domain 2 › Udp N-acetylglucosamine O-acyltransferase, C-terminal domain 0.64 47.0 4.14e-01 80.0% 63.4%
2l9bA00 1.25.40.630 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.63 44.0 3.75e-01 74.5% 71.4%
6qpqB00 1.10.10.580 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E 0.60 43.0 3.86e-01 78.2% 92.6%
1bl0A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.58 41.0 4.08e-01 76.4% 96.4%
6az1a00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 41.0 3.82e-01 78.2% 91.7%
5z4zC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 39.0 3.42e-01 76.4% 62.5%
1e6vB02 1.20.840.10 Mainly Alpha › Up-down Bundle › Methyl-coenzyme M Reductase; Chain B, domain 2 › Methyl-coenzyme M reductase, alpha/beta subunit, C-terminal 0.55 45.0 2.95e-01 100.0% 36.7%
2y2wC02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.54 45.0 2.80e-01 100.0% 40.7%
3cuqA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 42.0 3.85e-01 92.7% 93.8%
2zdiC00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.53 37.0 2.82e-01 74.5% 91.2%
2jdiG01 1.10.287.80 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain 0.53 37.0 3.66e-01 76.4% 75.4%
6ui4A01 1.20.120.720 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain 0.53 44.0 3.89e-01 100.0% 69.3%
1dusA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 37.0 2.65e-01 78.2% 36.6%
2cpmA00 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.52 44.0 3.78e-01 100.0% 71.3%
3bz6A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 36.0 3.39e-01 81.8% 93.6%
4q88A00 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.50 41.0 2.62e-01 100.0% 29.1%
ECOD (87)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3405102 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.93 62.0 7.15e-01 72.7% 95.0%
3731257 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.93 60.0 6.99e-01 72.7% 92.5%
3406399 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.89 65.0 6.55e-01 76.4% 78.2%
3629815 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.88 59.0 6.73e-01 74.5% 95.0%
3939710 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.88 63.0 5.89e-01 78.2% 63.1%
3501462 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.88 58.0 6.77e-01 74.5% 95.0%
3389442 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.87 62.0 6.79e-01 76.4% 91.1%
3233030 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.87 58.0 6.54e-01 74.5% 95.0%
3408565 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.85 61.0 6.64e-01 74.5% 93.3%
3472858 145.1.1.32 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box_4 0.85 61.0 5.53e-01 78.2% 57.5%
3468667 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.84 71.0 4.40e-01 90.9% 63.8%
3456290 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.84 64.0 5.90e-01 81.8% 92.9%
4160836 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.83 59.0 3.61e-01 74.5% 13.8%
3417160 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.83 61.0 4.95e-01 78.2% 44.2%
3837286 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.83 68.0 5.66e-01 100.0% 53.3%
3539114 145.1.1.32 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box_4 0.83 60.0 3.95e-01 76.4% 20.3%
3226289 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.83 54.0 6.05e-01 70.9% 92.5%
3915884 145.1.1.32 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box_4 0.82 59.0 4.24e-01 76.4% 28.6%
3751898 145.1.1.32 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box_4 0.81 58.0 5.36e-01 76.4% 60.0%
3171073 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.80 60.0 4.66e-01 80.0% 38.3%
3223353 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.80 53.0 6.01e-01 72.7% 95.0%
None — 0.80 70.0 4.00e-01 94.5% 36.6%
3224201 145.1.1.57 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › zf-TRAF_2 0.80 56.0 4.14e-01 74.5% 30.4%
3449733 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.79 67.0 3.85e-01 90.9% 40.3%
3419446 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.79 54.0 4.97e-01 76.4% 55.7%
3189161 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.79 68.0 3.93e-01 92.7% 52.9%
3370863 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.79 67.0 4.02e-01 92.7% 50.9%
3451797 207.1.1.79 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box 0.79 64.0 3.95e-01 89.1% 49.5%
3447143 145.1.1.45 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › LRR_At1g61320_AtMIF1, LRR_At5g56370 0.78 66.0 3.87e-01 92.7% 34.7%
3331704 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.78 57.0 5.94e-01 78.2% 86.0%
3616135 145.1.1.32 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box_4 0.78 55.0 5.20e-01 74.5% 64.6%
None — 0.78 64.0 3.73e-01 89.1% 28.9%
3816173 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.78 61.0 3.55e-01 85.5% 31.6%
3680513 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.78 53.0 5.74e-01 72.7% 88.9%
3737703 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.77 61.0 6.34e-01 98.2% 94.0%
3804513 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.77 63.0 3.96e-01 89.1% 43.6%
3820275 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.77 65.0 3.83e-01 92.7% 32.1%
None — 0.77 66.0 3.82e-01 92.7% 33.5%
4061448 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.77 66.0 4.09e-01 94.5% 46.7%
3814514 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.77 67.0 3.93e-01 94.5% 34.6%
3441396 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.77 55.0 5.74e-01 76.4% 86.0%
3808903 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.76 66.0 3.88e-01 94.5% 34.3%
None — 0.76 63.0 3.76e-01 92.7% 48.7%
3242739 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.76 56.0 5.79e-01 100.0% 86.0%
3803880 207.1.1.79 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box 0.76 66.0 3.91e-01 94.5% 39.5%
3687689 207.1.1.79 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box 0.76 65.0 3.95e-01 94.5% 35.3%
3814956 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.76 67.0 3.86e-01 96.4% 35.7%
3275127 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.76 66.0 3.82e-01 100.0% 12.0%
3337395 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.76 64.0 3.73e-01 92.7% 31.9%
3189379 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.75 61.0 5.78e-01 100.0% 73.8%
3376376 207.1.1.79 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box 0.75 64.0 4.25e-01 92.7% 91.9%
None — 0.75 65.0 4.29e-01 94.5% 66.0%
3449315 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.75 70.0 4.26e-01 100.0% 33.2%
3460335 207.1.1.172 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FBD, LRR_At5g56370 0.75 65.0 3.81e-01 94.5% 32.2%
3825795 207.1.1.99 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_At5g56370 0.75 63.0 3.63e-01 92.7% 37.8%
3221696 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.75 66.0 3.89e-01 96.4% 33.5%
3430466 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.75 62.0 4.31e-01 90.9% 86.8%
None — 0.75 64.0 3.77e-01 94.5% 33.7%
3436851 207.1.1.79 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box 0.75 62.0 3.70e-01 90.9% 37.9%
3820274 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.75 63.0 3.84e-01 94.5% 48.7%
3259075 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.74 67.0 5.93e-01 100.0% 84.6%
3642624 207.1.1.116 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_FBXL15 0.74 65.0 4.34e-01 98.2% 52.9%
3208252 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.74 67.0 5.41e-01 100.0% 68.0%
3837389 207.1.1.79 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box 0.74 60.0 3.93e-01 92.7% 72.0%
3425357 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.74 66.0 5.88e-01 100.0% 74.4%
3833312 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.73 62.0 3.59e-01 92.7% 32.5%
None — 0.72 61.0 3.63e-01 94.5% 37.1%
3547224 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.72 65.0 5.59e-01 100.0% 64.7%
3694013 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.71 62.0 5.04e-01 100.0% 53.0%
None — 0.71 60.0 3.53e-01 94.5% 31.1%
3300879 207.1.1.96 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_At1g61320_AtMIF1 0.71 60.0 3.56e-01 94.5% 35.0%
3311308 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.70 57.0 3.42e-01 92.7% 33.1%
3399970 207.1.1.79 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box 0.70 65.0 4.12e-01 100.0% 30.4%
3213262 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.69 63.0 5.12e-01 100.0% 92.0%
3299128 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.68 60.0 4.97e-01 100.0% 63.0%
3672250 207.1.1.116 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_FBXL15 0.68 62.0 4.19e-01 100.0% 52.1%
3735929 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.67 61.0 5.48e-01 100.0% 92.0%
3219544 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.67 61.0 3.75e-01 100.0% 43.5%
3236496 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.67 61.0 3.88e-01 100.0% 49.2%
3731690 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.67 58.0 5.19e-01 100.0% 77.5%
3436290 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.66 61.0 5.82e-01 100.0% 87.5%
None — 0.66 60.0 3.52e-01 100.0% 22.1%
3236279 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.66 56.0 3.54e-01 96.4% 86.9%
3785669 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.66 60.0 5.36e-01 100.0% 89.3%
4951472 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.53 37.0 2.84e-01 76.4% 94.6%
4027679 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.53 37.0 3.12e-01 76.4% 75.2%
3478961 5001.1.1.0 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like 0.51 41.0 2.57e-01 92.7% 50.7%
D2 medium residues 59-205
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2kheA00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.56 23.0 2.92e-01 76.9% 60.7%
2xefA01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.55 48.0 3.77e-01 95.9% 80.6%
5ib9A01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.52 45.0 3.68e-01 95.2% 75.8%
1jmxA02 2.40.128.120 Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 0.52 33.0 3.83e-01 82.3% 87.2%
1zhxA03 2.40.160.120 Mainly Beta › Beta Barrel › Porin › 0.51 46.0 4.27e-01 100.0% 88.0%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3693958 331.3.1.17 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt 0.53 45.0 3.82e-01 89.1% 72.6%
2393149 5084.8.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher 0.51 35.0 3.89e-01 96.6% 86.6%
4666231 9.1.1.14 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › CpeS 0.51 38.0 3.61e-01 77.6% 67.4%