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hypothetical_protein_D1R72_gp019
Euk-VirHeterosigma_akashiwo_virus_01
hypothetical_protein_D1R72_gp019__YP_009507416__Heterosigma_akashiwo_virus_01__97195
Identity
- Accession:
- YP_009507416 ↗
- Protein ID:
- hypothetical_protein_D1R72_gp019
- Kingdom:
- euk
Quality
54.7
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Algavirales›
Phycodnaviridae›
Raphidovirus›
Heterosigma_akashiwo_virus_01
TaxID: 97195
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-41_164-231
D2
high
residues 45-134
Domain cluster:
rep: hypothetical_protein_BNJ_00443__YP_009352835__Kaumoebavirus_Viruses.__X__D51-156
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6inxA02 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.67 | 29.0 | 3.35e-01 | 91.1% | 53.8% |
| 5jh8A02 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.60 | 29.0 | 3.27e-01 | 91.1% | 58.2% |
| 3nybA02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.56 | 38.0 | 3.60e-01 | 70.0% | 90.9% |
| 2z6oA00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.53 | 42.0 | 3.52e-01 | 86.7% | 95.8% |
| 4eg9A00 | 2.50.20.40 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › | 0.52 | 38.0 | 2.88e-01 | 76.7% | 88.7% |
| 4opmA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 43.0 | 3.00e-01 | 92.2% | 82.9% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4102844 | 3019.1.1.1 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › Flagellin_IN | 0.74 | 67.0 | 6.26e-01 | 100.0% | 93.6% |
| 4992387 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.62 | 51.0 | 4.51e-01 | 88.9% | 81.5% |
| 3169646 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.53 | 34.0 | 3.39e-01 | 92.2% | 61.3% |
| 3954395 | 3097.1.1.0 ↗ | a+b two layers › Ribosome-associated factor Y › Ribosome-associated factor Y › Ribosome-associated factor Y | 0.53 | 28.0 | 3.45e-01 | 84.4% | 83.6% |
| 3755591 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.50 | 34.0 | 3.81e-01 | 96.7% | 98.5% |
| 3560257 | 5.1.4.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,ANAPC4_WD40 | 0.50 | 37.0 | 2.53e-01 | 80.0% | 28.7% |
D3
medium
residues 270-343