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hypothetical_protein_D1R72_gp048

Euk-Vir

Heterosigma_akashiwo_virus_01

hypothetical_protein_D1R72_gp048__YP_009507445__Heterosigma_akashiwo_virus_01__97195

Identity

Accession:
YP_009507445 ↗
Protein ID:
hypothetical_protein_D1R72_gp048
Kingdom:
euk

Quality

78.6 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Algavirales› Phycodnaviridae› Raphidovirus› Heterosigma_akashiwo_virus_01

TaxID: 97195

Cluster

View cluster (69 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-200
PDB
Domain cluster: rep: HQ332139.1__AGF91556.1__PRRG_00047__00045__D4-148
CATH (20)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4gs3A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.76 35.0 5.14e-01 100.0% 96.7%
2cwaA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.74 35.0 4.70e-01 82.7% 81.7%
4pqxA01 2.40.50.500 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NigD-like N-terminal OB domain 0.71 28.0 4.66e-01 80.7% 100.0%
1jb3A00 2.40.50.120 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.69 38.0 4.67e-01 100.0% 81.9%
6rupA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.69 38.0 5.05e-01 82.7% 96.4%
4jg2A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.69 55.0 5.74e-01 100.0% 89.2%
1v1qA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.69 37.0 4.84e-01 83.2% 92.7%
2vw9B00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.67 36.0 4.93e-01 81.7% 99.0%
6ro0B02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.67 36.0 4.72e-01 87.3% 92.7%
1se8A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 37.0 4.82e-01 92.4% 98.2%
3rmhB00 2.40.50.810 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.63 39.0 4.67e-01 100.0% 91.0%
2c35B02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 29.0 4.17e-01 80.7% 98.9%
4jbjA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 29.0 3.79e-01 92.4% 82.7%
3kf8A00 2.40.50.1040 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.56 38.0 3.75e-01 100.0% 63.8%
4dqlB01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.55 30.0 3.92e-01 87.8% 94.5%
2hfqA00 3.10.510.10 Alpha Beta › Roll › NE1680-like fold › NE1680-like 0.55 20.0 2.90e-01 78.7% 70.6%
3doaA01 2.30.310.10 Mainly Beta › Roll › ibrinogen binding protein from staphylococcus aureus fold › ibrinogen binding protein from staphylococcus aureus domain 0.52 28.0 3.12e-01 90.4% 64.1%
5gxuB01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.52 31.0 3.89e-01 93.4% 96.7%
3hduA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.51 32.0 3.56e-01 96.4% 78.3%
1e62A01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.51 32.0 3.94e-01 88.8% 97.7%
ECOD (15)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4486408 2.1.1.326 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF5482 0.85 59.0 6.91e-01 100.0% 95.9%
3380367 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.80 74.0 7.48e-01 100.0% 96.9%
235847 2.1.1.53 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Enc34_ssDNA-bd 0.72 54.0 5.74e-01 100.0% 87.9%
3391480 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.69 44.0 5.40e-01 93.4% 100.0%
5060754 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.66 36.0 4.71e-01 96.4% 92.2%
3518905 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.65 33.0 4.07e-01 83.2% 75.2%
3202297 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 37.0 3.90e-01 100.0% 68.6%
3972759 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.56 32.0 4.17e-01 94.4% 100.0%
2583503 304.156.1.0 ↗ a+b two layers › Alpha-beta plaits › DNA translocase FtsK N-terminal domain › DNA translocase FtsK N-terminal domain 0.55 22.0 3.16e-01 89.3% 76.4%
3607823 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.55 30.0 3.90e-01 87.3% 97.1%
1837346 11.1.1.182 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Fn3-like 0.53 24.0 3.00e-01 90.4% 67.5%
3290652 306.2.1.0 ↗ a+b two layers › Glucose permease domain IIB-like › arginine repressor C terminal domain-related › C-terminal domain of arginine repressor 0.53 25.0 3.57e-01 100.0% 96.7%
5075465 4325.1.1.0 ↗ mixed a+b and a/b › YegP-like › YegP-like › YegP-like 0.53 17.0 2.78e-01 78.2% 80.0%
3594168 2.1.1.16 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_bind 0.52 32.0 3.33e-01 94.9% 62.6%
135071 222.1.1.4 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT 0.51 32.0 3.56e-01 96.4% 78.3%