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hypothetical_protein_D1R72_gp221

Euk-Vir

Heterosigma_akashiwo_virus_01

hypothetical_protein_D1R72_gp221__YP_009507618__Heterosigma_akashiwo_virus_01__97195

Identity

Accession:
YP_009507618 ↗
Protein ID:
hypothetical_protein_D1R72_gp221
Kingdom:
euk

Quality

89.7 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-120
PDB
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF00705.24 best PCNA_N 81.4 6.70e-23 100.0% 88.2%
PF04005.18 Hus1 36.6 4.00e-09 94.1% 31.6%
D2 high residues 140-249
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02747.21 best PCNA_C 39.7 7.10e-10 99.1% 81.2%
CATH (32)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1sxjH02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.91 88.0 8.23e-01 100.0% 91.4%
1u7bA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.91 87.0 6.42e-01 100.0% 45.8%
1plqA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.91 88.0 6.36e-01 100.0% 45.7%
3p91A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.89 84.0 6.26e-01 100.0% 44.5%
2ix2B00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.88 84.0 6.26e-01 100.0% 45.7%
1ge8A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.88 84.0 6.29e-01 100.0% 47.5%
3ifvC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.87 83.0 6.22e-01 100.0% 47.1%
1ud9A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.87 83.0 6.18e-01 100.0% 46.7%
1rwzA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.87 83.0 6.16e-01 100.0% 45.5%
2ix2A01 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.85 80.0 6.14e-01 99.1% 48.9%
1sxjH01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.85 79.0 7.53e-01 98.2% 91.9%
6j8yA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.84 79.0 5.82e-01 99.1% 46.3%
3a1jB00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.84 78.0 5.73e-01 100.0% 48.3%
2avtA02 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.83 78.0 6.26e-01 100.0% 56.3%
6j8yC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.82 77.0 5.74e-01 100.0% 46.7%
4trtA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.82 77.0 7.47e-01 100.0% 92.5%
1vpkA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.81 76.0 7.43e-01 100.0% 92.4%
5wceA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.81 75.0 7.34e-01 100.0% 91.6%
4rkiA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.81 75.0 7.08e-01 100.0% 89.2%
1jqlA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.80 75.0 7.32e-01 100.0% 92.4%
5agvA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.80 75.0 7.02e-01 100.0% 90.1%
5aguA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.80 74.0 7.08e-01 100.0% 92.1%
8dqwG01 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.80 74.0 6.24e-01 100.0% 74.9%
1t6lA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.80 75.0 5.60e-01 100.0% 45.4%
5w7zA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.79 72.0 7.12e-01 99.1% 93.8%
6ap4B02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.79 73.0 6.67e-01 100.0% 85.8%
3hslX00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.77 71.0 5.18e-01 100.0% 47.0%
3pweA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.77 71.0 6.83e-01 100.0% 87.8%
6ptrB01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.77 69.0 6.92e-01 99.1% 93.8%
5agvA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.77 70.0 6.70e-01 100.0% 86.3%
1b77A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.76 68.0 5.28e-01 100.0% 46.5%
2xcmC00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 36.0 3.90e-01 76.4% 72.8%
ECOD (99)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4372908 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.94 88.0 8.39e-01 100.0% 86.4%
4030418 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.93 89.0 8.06e-01 100.0% 90.7%
4026069 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.92 88.0 8.09e-01 100.0% 88.1%
3292092 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.91 88.0 8.10e-01 100.0% 90.3%
138072 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.91 88.0 8.16e-01 100.0% 89.3%
4055466 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.91 87.0 8.32e-01 100.0% 91.9%
1290662 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.91 87.0 7.82e-01 100.0% 82.5%
2392831 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.91 87.0 8.20e-01 100.0% 90.6%
4936050 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.91 87.0 8.24e-01 100.0% 91.2%
4991675 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.90 87.0 8.26e-01 100.0% 91.2%
5027067 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.90 87.0 8.41e-01 100.0% 95.8%
4976500 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.90 87.0 8.16e-01 100.0% 88.3%
4948360 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.90 86.0 8.05e-01 99.1% 86.0%
5037345 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.90 86.0 7.97e-01 100.0% 88.7%
4941929 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.90 86.0 8.12e-01 100.0% 88.3%
4983064 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.90 86.0 8.20e-01 100.0% 92.7%
4456195 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.90 86.0 8.32e-01 100.0% 93.3%
4956740 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.90 85.0 8.13e-01 100.0% 92.0%
3351103 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.89 86.0 7.87e-01 100.0% 85.2%
2805173 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.89 85.0 8.11e-01 100.0% 89.6%
5052551 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.89 85.0 8.09e-01 100.0% 90.4%
143428 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.89 84.0 8.16e-01 100.0% 90.8%
4992059 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.89 85.0 8.14e-01 100.0% 92.7%
5011281 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.89 85.0 8.09e-01 100.0% 89.6%
5060716 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.89 84.0 7.89e-01 100.0% 90.8%
4646871 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.89 85.0 8.07e-01 100.0% 90.4%
4934002 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.89 85.0 7.93e-01 100.0% 86.9%
4660283 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.89 84.0 8.01e-01 100.0% 92.8%
4232371 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.89 84.0 8.17e-01 100.0% 94.2%
4025727 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.88 84.0 7.62e-01 100.0% 87.9%
5037314 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.88 84.0 8.13e-01 100.0% 94.2%
5010672 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.88 84.0 8.17e-01 100.0% 94.2%
5033948 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.88 84.0 7.85e-01 100.0% 86.2%
5043507 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.88 84.0 8.11e-01 100.0% 95.8%
2588759 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.88 84.0 8.12e-01 100.0% 93.4%
5000468 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.88 84.0 7.97e-01 100.0% 93.6%
167574 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.88 84.0 7.82e-01 100.0% 85.5%
4943405 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.88 84.0 7.98e-01 100.0% 92.0%
309454 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.87 83.0 7.74e-01 100.0% 85.6%
4939066 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.87 83.0 7.81e-01 100.0% 89.1%
3997015 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.87 82.0 7.71e-01 100.0% 90.0%
4517015 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.87 82.0 7.88e-01 100.0% 91.1%
5028024 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.87 83.0 7.75e-01 100.0% 87.7%
3722114 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.87 82.0 7.19e-01 100.0% 91.0%
3738030 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.87 82.0 7.57e-01 100.0% 89.6%
3230925 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.87 81.0 7.66e-01 100.0% 90.8%
4995028 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.87 82.0 7.83e-01 100.0% 93.6%
4212381 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.87 83.0 7.62e-01 100.0% 86.7%
5991 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.87 83.0 7.95e-01 100.0% 91.0%
4998585 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.86 83.0 7.99e-01 100.0% 91.7%
4026073 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.86 81.0 7.75e-01 100.0% 96.8%
3478160 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.86 82.0 7.71e-01 100.0% 92.2%
3936914 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.86 81.0 7.63e-01 100.0% 90.0%
4013292 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.86 81.0 7.50e-01 100.0% 90.4%
5029787 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.86 82.0 7.95e-01 100.0% 92.5%
3256903 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.86 81.0 7.50e-01 100.0% 88.9%
5039027 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.86 82.0 7.90e-01 100.0% 93.3%
3624708 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.86 80.0 7.46e-01 100.0% 87.4%
3725759 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.86 80.0 6.83e-01 100.0% 92.3%
3788095 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.85 81.0 7.47e-01 100.0% 88.9%
3407531 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.85 80.0 7.41e-01 100.0% 86.7%
3743106 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.85 80.0 7.21e-01 100.0% 93.1%
3782606 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.85 79.0 7.17e-01 100.0% 86.2%
3387590 227.1.1.8 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 0.85 75.0 7.42e-01 100.0% 89.6%
3406311 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.85 79.0 6.97e-01 100.0% 87.7%
3743107 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.85 79.0 7.23e-01 100.0% 90.0%
3932751 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.84 79.0 7.42e-01 100.0% 90.8%
3256904 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.84 79.0 7.50e-01 99.1% 93.6%
5074321 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.84 80.0 7.58e-01 100.0% 88.8%
3551142 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.84 79.0 7.09e-01 100.0% 82.1%
4360456 227.1.1.8 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 0.84 79.0 7.44e-01 100.0% 86.2%
3624709 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.84 79.0 7.40e-01 100.0% 88.5%
3574882 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.84 78.0 7.20e-01 100.0% 87.0%
3734891 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.84 78.0 6.98e-01 100.0% 92.7%
3798355 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.84 78.0 7.14e-01 100.0% 85.7%
3936915 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.83 78.0 7.32e-01 100.0% 91.5%
2392830 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.83 78.0 7.34e-01 100.0% 86.3%
2878147 227.1.1.8 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 0.83 77.0 7.14e-01 100.0% 83.2%
3193266 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.83 77.0 6.95e-01 100.0% 89.7%
5039026 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.83 74.0 7.23e-01 100.0% 87.5%
4542774 227.1.1.8 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 0.83 78.0 7.56e-01 100.0% 92.5%
3210421 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.82 77.0 6.79e-01 100.0% 87.7%
4162061 227.1.1.8 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 0.82 78.0 7.45e-01 100.0% 91.1%
3599554 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.82 76.0 6.82e-01 100.0% 89.3%
4426056 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.82 77.0 6.75e-01 100.0% 82.6%
3407530 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.82 76.0 7.07e-01 100.0% 88.9%
4936049 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.82 76.0 7.35e-01 100.0% 90.0%
3230926 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.82 76.0 7.13e-01 100.0% 88.5%
3719897 227.1.1.18 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DUF7881_C 0.82 75.0 7.22e-01 99.1% 91.2%
4437554 227.1.1.8 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 0.82 76.0 7.30e-01 100.0% 88.8%
1871497 227.1.1.8 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 0.81 73.0 7.16e-01 100.0% 89.1%
4619259 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.81 76.0 6.84e-01 100.0% 82.8%
4059128 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.81 75.0 7.29e-01 100.0% 90.0%
3743202 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.81 76.0 7.36e-01 100.0% 95.0%
5059299 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.81 75.0 7.27e-01 100.0% 90.0%
3478975 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.81 75.0 6.99e-01 100.0% 87.4%
4460660 227.1.1.7 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 0.81 76.0 7.02e-01 100.0% 87.4%
3932752 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.80 74.0 7.11e-01 100.0% 92.0%
4980359 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.80 74.0 7.23e-01 100.0% 90.8%