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hypothetical_protein_D1U33_gp046
Euk-VirCommon_midwife_toad_virus
hypothetical_protein_D1U33_gp046__YP_009508674__Common_midwife_toad_virus__540070
Identity
- Accession:
- YP_009508674 ↗
- Protein ID:
- hypothetical_protein_D1U33_gp046
- Kingdom:
- euk
Quality
65.0
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Pimascovirales›
Iridoviridae›
Ranavirus›
Common_midwife_toad_virus
TaxID: 540070
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 97-170
Domain cluster:
rep: hypothetical_protein_BZK12_gp026__YP_009342094__Lymphocystis_disease_virus_Sa__1898060__D124-183
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2e5yA02 | 1.20.5.440 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › ATP synthase delta/epsilon subunit, C-terminal domain | 0.62 | 34.0 | 4.01e-01 | 97.3% | 84.4% |
| 4fm3A00 | 1.20.1270.390 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.61 | 36.0 | 3.30e-01 | 97.3% | 44.2% |
| 2x1lB02 | 2.170.220.10 | Mainly Beta › Beta Complex › Methionyl-trna Synthetase; domain 2 › | 0.58 | 37.0 | 3.75e-01 | 95.9% | 63.2% |
| 2vwaA00 | 1.20.58.1330 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Plasmodium falciparum UIS3 membrane protein | 0.58 | 42.0 | 3.87e-01 | 77.0% | 84.8% |
| 4ip8A00 | 1.10.132.110 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Serum amyloid A protein | 0.58 | 46.0 | 4.10e-01 | 86.5% | 76.2% |
| 7ckaA01 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.52 | 33.0 | 2.47e-01 | 91.9% | 22.8% |
| 2ewfA02 | 1.20.1270.310 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.51 | 32.0 | 3.15e-01 | 97.3% | 56.8% |
| 1f5oA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.51 | 44.0 | 3.57e-01 | 100.0% | 67.1% |
| 1yxrA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.51 | 36.0 | 3.70e-01 | 77.0% | 77.0% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2979253 | 632.21.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Helical bundle domain in endo-beta-N-acetylglucosaminidase F2 › Helical bundle domain in endo-beta-N-acetylglucosaminidase F2 › EndoS_helical | 0.64 | 37.0 | 3.80e-01 | 100.0% | 58.6% |
| 4101936 | 6171.1.1.0 ↗ | alpha bundles › C-terminal helical domain in Jumonji domain-containing histone demethylases › C-terminal helical domain in Jumonji domain-containing histone demethylases › C-terminal helical domain in Jumonji domain-containing histone demethylases | 0.63 | 45.0 | 4.56e-01 | 75.7% | 81.3% |
| 3506109 | 4163.1.2.1 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF2 C-terminal domain-like › Sld5 | 0.58 | 41.0 | 3.60e-01 | 75.7% | 52.5% |
| 5078009 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.58 | 40.0 | 2.58e-01 | 71.6% | 36.3% |
| 4933309 | 604.17.1.0 ↗ | alpha bundles › Spectrin repeat-like › MTH_863 C-terminal domain-like › MTH_863 C-terminal domain-like | 0.57 | 39.0 | 4.18e-01 | 71.6% | 95.0% |
| 4983683 | 604.12.1.140 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › DUF447_C | 0.56 | 40.0 | 4.25e-01 | 75.7% | 90.8% |
| 3890614 | 601.33.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › CHAD domain › CHAD domain | 0.56 | 39.0 | 4.03e-01 | 77.0% | 78.6% |
| 4975245 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.55 | 39.0 | 3.72e-01 | 74.3% | 77.3% |
| 3338006 | 109.7.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Cytochrome c oxidase subunit E › Cytochrome c oxidase subunit E | 0.55 | 38.0 | 3.35e-01 | 74.3% | 49.2% |
| 3602612 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.54 | 33.0 | 3.46e-01 | 98.6% | 64.3% |
| 3670742 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.54 | 38.0 | 3.32e-01 | 74.3% | 49.2% |
| 5000728 | 10.28.1.1 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in Zinc finger protein ZPR1 › Jelly-roll domain in Zinc finger protein ZPR1 › jr-ZPR1 | 0.53 | 46.0 | 4.04e-01 | 97.3% | 68.2% |
| 4988754 | 3930.1.1.3 ↗ | alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase › RNA_helicase_helical | 0.53 | 42.0 | 3.58e-01 | 93.2% | 52.8% |
| 3492451 | 101.35.1.18 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › HSD3 | 0.51 | 32.0 | 3.32e-01 | 74.3% | 67.1% |
| 3687243 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 31.0 | 3.23e-01 | 77.0% | 65.7% |