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hypothetical_protein_DH26_gp070

Euk-Vir

Anopheles_minimus_iridovirus

hypothetical_protein_DH26_gp070__YP_009021147__Anopheles_minimus_iridovirus__1465751

Identity

Accession:
YP_009021147 ↗
Protein ID:
hypothetical_protein_DH26_gp070
Kingdom:
euk

Quality

70.2 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Iridoviridae› Chloriridovirus› Chloriridovirus_anopheles1

TaxID: 1465751

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 48-133
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01471.24 best PG_binding_1 23.9 5.50e-05 73.3% 50.9%
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1eakA01 1.10.101.10 Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD 0.88 58.0 6.72e-01 86.0% 92.1%
4c2dA02 1.10.101.10 Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD 0.80 59.0 5.99e-01 94.2% 77.6%
3d2yA02 1.10.101.10 Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD 0.76 55.0 5.57e-01 90.7% 76.2%
1lbuA01 1.10.101.10 Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD 0.74 56.0 5.72e-01 89.5% 81.0%
7aj9A01 1.10.101.10 Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD 0.74 52.0 5.81e-01 89.5% 94.0%
3bkhA01 1.10.101.10 Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD 0.72 54.0 5.48e-01 96.5% 79.1%
1ck7A01 3.40.390.10 Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) 0.67 61.0 4.36e-01 98.8% 77.9%
4g54A02 1.10.101.10 Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD 0.66 52.0 5.67e-01 83.7% 100.0%
7e84A03 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.64 34.0 2.99e-01 93.0% 35.0%
2l2dA00 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.59 32.0 3.47e-01 94.2% 60.3%
2nr7A00 1.20.141.10 Mainly Alpha › Up-down Bundle › Chitosanase, subunit A; domain 1 › Chitosanase, subunit A, domain 1 0.58 49.0 3.89e-01 98.8% 79.4%
1uajA02 1.10.1270.20 Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › tRNA(m1g37)methyltransferase, domain 2 0.56 32.0 3.43e-01 87.2% 64.4%
1ukfA00 3.90.70.20 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.56 38.0 2.94e-01 98.8% 31.9%
2fu2A00 1.20.1440.50 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Ta0600-like 0.53 38.0 3.99e-01 95.3% 82.1%
2r5uC00 1.10.860.10 Mainly Alpha › Orthogonal Bundle › DNAb Helicase; Chain A › DNAb Helicase; Chain A 0.52 47.0 4.00e-01 100.0% 71.0%
2w02B01 1.10.150.640 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › AcsD, thumb domain, helical bundle 0.51 36.0 3.82e-01 89.5% 83.8%
3f1xA01 1.10.3130.10 Mainly Alpha › Orthogonal Bundle › serine acetyltransferase, domain 1 › serine acetyltransferase, domain 1 0.51 43.0 3.60e-01 93.0% 84.6%
1i5nB00 1.20.120.160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain 0.51 43.0 3.76e-01 100.0% 62.9%
3cllA00 1.20.1080.10 Mainly Alpha › Up-down Bundle › Glycerol uptake facilitator protein › Glycerol uptake facilitator protein. 0.50 40.0 2.95e-01 87.2% 85.9%
ECOD (38)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3539881 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.88 61.0 6.52e-01 86.0% 81.3%
4055540 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.87 59.0 6.61e-01 83.7% 87.0%
3247155 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.86 58.0 6.61e-01 86.0% 90.8%
4160453 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.85 61.0 6.72e-01 86.0% 90.0%
3772398 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.85 60.0 6.30e-01 86.0% 78.8%
3765966 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.84 59.0 5.96e-01 86.0% 72.9%
3537259 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.84 61.0 6.39e-01 87.2% 81.2%
3893524 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.83 60.0 6.66e-01 87.2% 91.4%
3930763 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.82 61.0 6.53e-01 87.2% 88.0%
4380775 2003.1.1.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.82 57.0 4.26e-01 89.5% 31.0%
3764906 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.82 58.0 6.06e-01 86.0% 78.8%
4600634 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.82 56.0 6.62e-01 82.6% 100.0%
4032027 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.82 57.0 5.78e-01 86.0% 72.9%
4117418 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.82 55.0 6.52e-01 84.9% 100.0%
3788528 144.1.1.0 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like 0.81 59.0 4.75e-01 87.2% 41.9%
4312892 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.81 54.0 6.34e-01 82.6% 96.7%
3772718 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.81 60.0 6.09e-01 87.2% 77.6%
3299326 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.81 57.0 6.56e-01 87.2% 96.9%
1877329 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.80 52.0 5.53e-01 80.2% 75.0%
3222017 144.1.1.0 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like 0.80 61.0 6.04e-01 90.7% 75.6%
3302194 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.79 58.0 5.60e-01 87.2% 68.4%
3631772 144.1.1.0 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like 0.79 58.0 4.48e-01 90.7% 36.7%
3957237 144.1.1.0 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like 0.79 60.0 6.37e-01 81.4% 90.7%
3933825 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.78 58.0 6.20e-01 87.2% 89.3%
3221065 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.77 61.0 6.55e-01 86.0% 94.7%
3994858 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.77 65.0 6.79e-01 90.7% 95.0%
3356981 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.76 59.0 6.09e-01 94.2% 87.5%
1165079 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.71 59.0 5.69e-01 97.7% 79.2%
3621525 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.70 57.0 6.14e-01 89.5% 98.7%
3299934 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.70 57.0 5.33e-01 87.2% 78.1%
3659978 101.1.1.138 ↗ alpha arrays › HTH › HTH › Three-helical HTH › GeBP-like_DBD 0.60 44.0 4.31e-01 90.7% 70.5%
3658807 2485.1.1.49 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_12 0.54 47.0 3.49e-01 96.5% 55.9%
3857980 101.1.2.309 ↗ alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.53 40.0 3.73e-01 81.4% 93.6%
3800950 188.1.1.0 ↗ alpha arrays › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain 0.52 43.0 3.20e-01 88.4% 65.5%
3646654 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.52 41.0 3.73e-01 89.5% 62.5%
3839204 2.21.1.3 ↗ beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) › HTH_OrfB_IS605 0.52 39.0 3.15e-01 82.6% 46.7%
3599288 5048.1.1.1 ↗ alpha complex topology › Aquaporin-like › Aquaporin-like › Aquaporin-like › MIP 0.50 39.0 2.94e-01 87.2% 62.1%
4204916 3457.1.1.1 ↗ alpha bundles › GxGD membrane protease › GxGD membrane protease › GxGD membrane protease › Peptidase_A24 0.50 37.0 2.84e-01 79.1% 71.6%
D2 medium residues 134-186
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2fulB00 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.59 40.0 2.87e-01 71.7% 49.1%
1i1rB00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.58 44.0 3.10e-01 83.0% 51.5%
4ikhA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.57 40.0 3.05e-01 73.6% 74.8%
2mc3A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 41.0 3.31e-01 77.4% 93.2%
2liuA01 1.10.1200.10 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like 0.56 42.0 3.67e-01 86.8% 51.8%
2qu7A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.53 38.0 2.85e-01 77.4% 44.9%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3994858 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.78 64.0 5.50e-01 88.7% 76.2%
3370156 2004.1.1.56 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NB-ARC 0.54 40.0 2.87e-01 81.1% 29.1%