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hypothetical_protein_EhV001
Euk-VirEmiliania_huxleyi_virus_86
hypothetical_protein_EhV001__YP_293755__Emiliania_huxleyi_virus_86__181082
Identity
- Accession:
- YP_293755 ↗
- Protein ID:
- hypothetical_protein_EhV001
- Kingdom:
- euk
Quality
57.5
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Algavirales›
Phycodnaviridae›
Coccolithovirus›
Emiliania_huxleyi_virus_86
TaxID: 181082
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 165-247
Domain cluster:
rep: OK283618.1__UCR92177.1__LPLM1_00042__00042__D87-159
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02945.22 best | Endonuclease_7 | 40.0 | 4.10e-10 | 96.4% | 56.1% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3goxA03 | 3.40.1800.10 | Alpha Beta › 3-Layer(aba) Sandwich › His-Me finger endonuclease fold › His-Me finger endonucleases | 0.70 | 60.0 | 6.06e-01 | 92.8% | 100.0% |
| 1z2qA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.54 | 39.0 | 3.89e-01 | 73.5% | 79.8% |
| 5zm4B00 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.52 | 44.0 | 3.07e-01 | 94.0% | 82.4% |
| 3favD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.52 | 29.0 | 3.06e-01 | 73.5% | 60.3% |
| 1atiB02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.51 | 37.0 | 3.38e-01 | 77.1% | 95.5% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5081423 | 378.1.1.3 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_7 | 0.74 | 57.0 | 6.07e-01 | 88.0% | 91.9% |
| 5049537 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.72 | 52.0 | 5.01e-01 | 75.9% | 74.5% |
| 4966684 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.72 | 43.0 | 4.95e-01 | 72.3% | 83.3% |
| 1002460 | 378.1.1.3 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_7 | 0.68 | 61.0 | 6.11e-01 | 97.6% | 100.0% |
| 3929512 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.59 | 38.0 | 4.38e-01 | 75.9% | 90.0% |
| 3865964 | 376.1.3.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE | 0.59 | 44.0 | 4.21e-01 | 79.5% | 81.1% |
| 3185361 | 376.1.1.5 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-UBP | 0.59 | 43.0 | 4.01e-01 | 78.3% | 69.5% |
| 5080069 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.58 | 35.0 | 3.15e-01 | 84.3% | 41.7% |
| 4025773 | 376.1.1.32 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-UBP_var | 0.57 | 40.0 | 3.69e-01 | 80.7% | 54.8% |
| 3397315 | 603.2.1.12 ↗ | alpha bundles › STAT-like › STAT › STAT › 7tm_7 | 0.56 | 48.0 | 3.23e-01 | 100.0% | 98.7% |
| 3607253 | 376.1.3.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE | 0.54 | 40.0 | 4.01e-01 | 78.3% | 94.1% |
| 3688776 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.54 | 37.0 | 3.75e-01 | 74.7% | 73.8% |
| 3315604 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.53 | 36.0 | 4.01e-01 | 78.3% | 90.8% |