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hypothetical_protein_EhV209

Euk-Vir

Emiliania_huxleyi_virus_86

hypothetical_protein_EhV209__YP_293963__Emiliania_huxleyi_virus_86__181082

Identity

Accession:
YP_293963 ↗
Protein ID:
hypothetical_protein_EhV209
Kingdom:
euk

Quality

71.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-107
PDB
Domain cluster: representative
CATH (50)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2cpdA01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.72 36.0 4.04e-01 100.0% 61.3%
3lcvB02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.70 50.0 3.94e-01 100.0% 36.1%
1akoA00 3.60.10.10 Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase 0.66 44.0 3.19e-01 100.0% 25.0%
3fzgA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.64 48.0 3.83e-01 100.0% 39.8%
1mw7A03 3.30.70.980 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain 0.64 33.0 3.72e-01 100.0% 64.0%
2ln3A00 3.30.110.140 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › 0.63 45.0 4.78e-01 100.0% 86.7%
2lxrA00 3.30.110.40 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › TusA-like domain 0.63 46.0 5.07e-01 98.0% 98.7%
4nzrM03 3.30.110.180 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › 0.63 55.0 5.12e-01 100.0% 77.2%
4ab7H02 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.62 42.0 3.66e-01 100.0% 44.1%
2o0bA01 3.65.10.10 Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain 0.62 43.0 3.37e-01 100.0% 33.5%
3zihA00 3.30.110.150 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › SepF-like protein 0.62 42.0 4.64e-01 100.0% 88.6%
3p04A00 3.30.110.150 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › SepF-like protein 0.61 43.0 4.69e-01 100.0% 92.2%
1je3A01 3.30.110.40 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › TusA-like domain 0.59 42.0 4.64e-01 100.0% 100.0%
2bkyX00 3.30.110.20 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain 0.59 46.0 4.88e-01 99.0% 97.7%
2crqA01 3.30.110.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Translation initiation factor 3 (IF-3), C-terminal domain 0.59 47.0 4.92e-01 100.0% 98.8%
2cpmA00 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.59 40.0 4.06e-01 78.6% 72.3%
3s6gA02 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.59 39.0 3.49e-01 100.0% 45.9%
4atnA03 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 46.0 3.73e-01 100.0% 45.1%
2r7hB00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.58 45.0 3.92e-01 100.0% 52.2%
2fiaB00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.58 45.0 3.87e-01 100.0% 51.6%
7m0oA02 3.65.10.10 Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain 0.58 40.0 3.28e-01 99.0% 38.0%
1tigA00 3.30.110.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Translation initiation factor 3 (IF-3), C-terminal domain 0.58 45.0 4.73e-01 100.0% 94.3%
3gueB01 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.57 48.0 3.34e-01 93.9% 83.7%
6mp7A01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.56 48.0 3.43e-01 99.0% 39.2%
2o07A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.56 40.0 3.18e-01 100.0% 34.9%
3o4fH02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 39.0 3.07e-01 100.0% 33.5%
3gwzA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 49.0 3.66e-01 100.0% 66.4%
3g7uA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 42.0 3.51e-01 100.0% 45.4%
3dp7A03 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 48.0 4.06e-01 100.0% 92.1%
2ek0A00 3.30.110.20 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain 0.53 42.0 4.40e-01 98.0% 94.4%
5iceA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.53 46.0 3.52e-01 100.0% 64.9%
1q0sA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.53 38.0 3.43e-01 100.0% 51.4%
2q7bA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.53 42.0 3.65e-01 100.0% 53.7%
2o0bA02 3.65.10.10 Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain 0.52 40.0 3.16e-01 82.7% 63.7%
1vhvA02 3.30.950.10 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain 0.52 46.0 4.17e-01 100.0% 73.4%
2fgyA03 3.30.1330.140 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Carboxysome Shell Carbonic Anhydrase, C-terminal domain 0.52 44.0 4.20e-01 95.9% 98.3%
4oc8A01 2.30.280.20 Mainly Beta › Roll › PUA domain-like › 0.52 42.0 3.31e-01 88.8% 60.9%
4lg1B00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 43.0 3.45e-01 94.9% 82.2%
2q4aA00 3.60.130.10 Alpha Beta › 4-Layer Sandwich › Double-stranded beta-helix › Clavaminate synthase-like 0.52 46.0 3.23e-01 100.0% 87.2%
4impA02 3.40.50.11460 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 44.0 3.51e-01 98.0% 66.8%
6upsA01 3.40.395.10 Alpha Beta › 3-Layer(aba) Sandwich › Adenoviral Proteinase; Chain › Adenoviral Proteinase; Chain A 0.51 41.0 3.58e-01 87.8% 80.6%
6fdfA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.51 45.0 3.66e-01 100.0% 51.8%
1q36A01 3.65.10.10 Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain 0.51 39.0 3.12e-01 82.7% 64.4%
1inlD01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.51 45.0 3.52e-01 100.0% 69.7%
2nxcA03 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.51 45.0 3.93e-01 100.0% 86.9%
1x8bA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.51 36.0 3.84e-01 100.0% 85.7%
4iscA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.51 43.0 3.83e-01 100.0% 89.7%
1a7jA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.50 43.0 3.21e-01 98.0% 86.0%
3hyiA01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.50 43.0 3.60e-01 100.0% 86.9%
2c7rA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.50 44.0 3.49e-01 100.0% 46.9%
ECOD (66)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3611027 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.70 34.0 3.79e-01 100.0% 57.5%
5024972 328.5.1.0 a+b two layers › IF3-like › SirA-like › SirA-like 0.68 51.0 5.57e-01 100.0% 97.5%
3305964 246.3.1.4 a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos2 0.68 49.0 3.48e-01 100.0% 25.1%
4947866 328.1.1.7 a+b two layers › IF3-like › AlbA-like › AlbA-like › PhoU 0.67 48.0 5.36e-01 99.0% 97.3%
4933974 328.9.1.0 a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain 0.66 43.0 5.09e-01 96.9% 100.0%
5036673 328.6.1.1 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase 0.66 46.0 3.49e-01 100.0% 31.8%
5075173 328.1.1.0 a+b two layers › IF3-like › AlbA-like › AlbA-like 0.66 45.0 5.22e-01 100.0% 100.0%
5003991 328.1.1.0 a+b two layers › IF3-like › AlbA-like › AlbA-like 0.66 48.0 5.10e-01 100.0% 88.2%
5074997 328.7.1.0 a+b two layers › IF3-like › Smr domain › Smr domain 0.65 46.0 5.14e-01 99.0% 96.0%
4973459 328.4.1.1 a+b two layers › IF3-like › YhbY-like › YhbY-like › CRS1_YhbY 0.65 46.0 4.93e-01 100.0% 85.9%
3486966 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.65 47.0 3.69e-01 100.0% 34.5%
3784945 246.3.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos 0.65 47.0 3.46e-01 100.0% 28.3%
3543869 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.64 45.0 4.61e-01 94.9% 75.8%
5009701 328.5.1.0 a+b two layers › IF3-like › SirA-like › SirA-like 0.64 44.0 5.06e-01 100.0% 100.0%
4936788 328.1.1.0 a+b two layers › IF3-like › AlbA-like › AlbA-like 0.64 46.0 5.14e-01 99.0% 98.7%
4950695 328.1.1.0 a+b two layers › IF3-like › AlbA-like › AlbA-like 0.64 46.0 5.09e-01 100.0% 98.7%
4983980 328.1.1.0 a+b two layers › IF3-like › AlbA-like › AlbA-like 0.64 44.0 4.99e-01 96.9% 100.0%
5010461 328.1.1.0 a+b two layers › IF3-like › AlbA-like › AlbA-like 0.64 46.0 5.08e-01 100.0% 98.7%
5053948 328.9.1.0 a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain 0.63 43.0 4.95e-01 100.0% 100.0%
5001624 328.1.1.0 a+b two layers › IF3-like › AlbA-like › AlbA-like 0.63 46.0 5.12e-01 99.0% 100.0%
4143892 328.6.1.1 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase 0.63 44.0 3.37e-01 100.0% 31.6%
5055166 328.1.1.0 a+b two layers › IF3-like › AlbA-like › AlbA-like 0.63 43.0 4.90e-01 96.9% 100.0%
3333834 328.4.1.1 a+b two layers › IF3-like › YhbY-like › YhbY-like › CRS1_YhbY 0.63 46.0 4.26e-01 100.0% 60.8%
3395407 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.63 46.0 4.83e-01 100.0% 89.4%
4070528 328.9.1.1 a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain › SepF 0.63 43.0 4.59e-01 100.0% 82.4%
4928243 328.1.1.0 a+b two layers › IF3-like › AlbA-like › AlbA-like 0.62 43.0 4.49e-01 94.9% 77.8%
3502555 328.3.1.0 a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain 0.62 47.0 4.78e-01 100.0% 83.2%
3992039 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.62 42.0 4.27e-01 77.6% 71.3%
5062515 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.62 46.0 4.24e-01 100.0% 58.5%
4947687 328.6.1.1 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase 0.62 42.0 3.22e-01 100.0% 31.2%
4536664 328.6.1.1 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase 0.62 42.0 3.22e-01 100.0% 30.9%
3596028 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.61 38.0 4.12e-01 92.9% 75.0%
5028628 328.6.1.1 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase 0.61 41.0 3.17e-01 100.0% 30.5%
5078456 328.1.1.0 a+b two layers › IF3-like › AlbA-like › AlbA-like 0.61 43.0 4.79e-01 96.9% 96.0%
3653143 328.7.1.0 a+b two layers › IF3-like › Smr domain › Smr domain 0.60 45.0 4.84e-01 99.0% 98.7%
4029073 328.1.1.1 a+b two layers › IF3-like › AlbA-like › AlbA-like › Alba 0.59 43.0 4.43e-01 99.0% 83.3%
4955075 310.3.1.0 a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related 0.59 41.0 4.70e-01 86.7% 95.9%
3468553 328.7.1.0 a+b two layers › IF3-like › Smr domain › Smr domain 0.59 45.0 3.98e-01 100.0% 53.6%
3654495 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.59 44.0 3.91e-01 96.9% 52.7%
4948057 328.4.1.0 a+b two layers › IF3-like › YhbY-like › YhbY-like 0.58 44.0 4.50e-01 100.0% 83.2%
5052652 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.58 45.0 3.69e-01 100.0% 44.3%
3347409 328.7.1.0 a+b two layers › IF3-like › Smr domain › Smr domain 0.58 46.0 4.32e-01 100.0% 68.8%
3236950 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.58 37.0 4.19e-01 76.5% 91.4%
3459409 328.7.1.0 a+b two layers › IF3-like › Smr domain › Smr domain 0.57 46.0 4.59e-01 100.0% 87.0%
3816680 109.4.1.1260 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, PPR_long 0.57 45.0 3.10e-01 100.0% 22.3%
4269299 328.6.1.1 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase 0.56 38.0 2.97e-01 100.0% 32.7%
3332456 328.4.1.1 a+b two layers › IF3-like › YhbY-like › YhbY-like › CRS1_YhbY 0.56 50.0 4.20e-01 99.0% 80.6%
5036919 328.6.1.1 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase 0.56 38.0 3.00e-01 100.0% 32.1%
3594508 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.55 46.0 3.43e-01 100.0% 34.6%
3505597 7516.1.1.85 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_tranf_2_4 0.55 46.0 3.36e-01 93.9% 81.4%
3452826 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.55 38.0 3.46e-01 96.9% 52.6%
5003842 2003.1.5.66 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.54 49.0 4.00e-01 100.0% 81.6%
4034419 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.54 48.0 3.78e-01 100.0% 50.5%
3506206 328.1.1.3 a+b two layers › IF3-like › AlbA-like › AlbA-like › Rpp20 0.53 46.0 4.35e-01 99.0% 92.8%
3412779 2004.1.1.51 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Sulfotransfer_1 0.53 46.0 3.24e-01 98.0% 56.7%
4484386 328.6.1.1 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase 0.53 40.0 3.17e-01 82.7% 63.2%
4967063 2003.1.5.80 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_24 0.53 46.0 3.53e-01 99.0% 68.5%
4967092 2003.1.5.80 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_24 0.52 45.0 3.57e-01 100.0% 73.2%
3220855 2003.1.5.73 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_16 0.51 44.0 3.62e-01 99.0% 83.2%
3241930 881.1.1.20 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DUF3557 0.51 45.0 4.26e-01 100.0% 84.2%
3622298 246.3.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos 0.51 43.0 3.22e-01 100.0% 81.0%
4967025 328.1.1.0 a+b two layers › IF3-like › AlbA-like › AlbA-like 0.51 45.0 3.83e-01 100.0% 60.6%
3614729 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.51 45.0 3.66e-01 100.0% 90.5%
None 0.51 45.0 3.26e-01 100.0% 50.9%
223188 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.51 43.0 3.83e-01 100.0% 89.7%
9581 2004.1.1.44 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PRK 0.50 43.0 3.21e-01 98.0% 86.0%