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hypothetical_protein_EhV266
Euk-VirEmiliania_huxleyi_virus_86
hypothetical_protein_EhV266__YP_294021__Emiliania_huxleyi_virus_86__181082
Identity
- Accession:
- YP_294021 ↗
- Protein ID:
- hypothetical_protein_EhV266
- Kingdom:
- euk
Quality
66.0
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Algavirales›
Phycodnaviridae›
Coccolithovirus›
Emiliania_huxleyi_virus_86
TaxID: 181082
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 90-139
Domain cluster:
representative
CATH (47)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1lrzA03 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.95 | 86.0 | 7.88e-01 | 96.0% | 83.9% |
| 2ic6A00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.94 | 86.0 | 7.53e-01 | 100.0% | 74.6% |
| 4ijjB00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.91 | 84.0 | 6.00e-01 | 100.0% | 40.8% |
| 1wtyA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.91 | 80.0 | 5.95e-01 | 96.0% | 41.4% |
| 4a17U01 | 1.10.287.310 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.90 | 84.0 | 7.11e-01 | 100.0% | 68.8% |
| 3layF00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.90 | 78.0 | 6.62e-01 | 94.0% | 75.6% |
| 3fxdB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.89 | 72.0 | 6.83e-01 | 86.0% | 77.6% |
| 3bvoA02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.88 | 69.0 | 5.64e-01 | 84.0% | 59.3% |
| 2qqyA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.86 | 74.0 | 5.25e-01 | 94.0% | 71.7% |
| 2yfaA02 | 1.20.1440.210 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.86 | 75.0 | 5.61e-01 | 96.0% | 42.2% |
| 4nsmA00 | 6.10.250.2770 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.86 | 76.0 | 6.65e-01 | 100.0% | 67.6% |
| 1sg2A00 | 3.30.910.20 | Alpha Beta › 2-Layer Sandwich › Protein Binding, DinI Protein; Chain A › Skp domain | 0.85 | 75.0 | 5.39e-01 | 100.0% | 41.1% |
| 4hteA01 | 1.20.58.1730 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.83 | 74.0 | 5.25e-01 | 100.0% | 35.0% |
| 3icxA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.83 | 67.0 | 5.89e-01 | 90.0% | 84.0% |
| 1wdzA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.82 | 71.0 | 4.58e-01 | 100.0% | 26.8% |
| 5ffdA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.81 | 63.0 | 4.59e-01 | 98.0% | 31.4% |
| 1st6A03 | 1.20.120.810 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Vinculin, Vh2 four-helix bundle | 0.80 | 72.0 | 4.58e-01 | 100.0% | 24.9% |
| 5wp3B00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.80 | 71.0 | 5.61e-01 | 100.0% | 50.0% |
| 2fcwA00 | 1.20.81.10 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › RAP domain | 0.80 | 68.0 | 5.39e-01 | 100.0% | 63.2% |
| 5yixA00 | 1.10.601.10 | Mainly Alpha › Orthogonal Bundle › RNA Polymerase Primary Sigma Factor › RNA Polymerase Primary Sigma Factor | 0.79 | 73.0 | 4.32e-01 | 100.0% | 75.6% |
| 3favD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.78 | 68.0 | 5.93e-01 | 100.0% | 73.1% |
| 2gtsA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.77 | 65.0 | 5.78e-01 | 100.0% | 68.8% |
| 6lumD01 | 1.20.1300.10 | Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit | 0.77 | 62.0 | 4.59e-01 | 88.0% | 36.8% |
| 1tjlA00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.74 | 68.0 | 4.78e-01 | 100.0% | 41.4% |
| 5h5mA02 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.73 | 61.0 | 4.61e-01 | 98.0% | 44.6% |
| 4okvE00 | 6.10.140.1890 | Special › Helix non-globular › Helix Hairpins › | 0.73 | 63.0 | 5.77e-01 | 100.0% | 73.8% |
| 3behB01 | 1.20.120.540 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels | 0.73 | 63.0 | 4.86e-01 | 100.0% | 43.6% |
| 8alzB08 | 1.10.3380.10 | Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › Sec63 N-terminal domain-like domain | 0.72 | 58.0 | 4.27e-01 | 88.0% | 86.3% |
| 3k2nA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.71 | 60.0 | 4.12e-01 | 96.0% | 86.4% |
| 4fd4A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.70 | 49.0 | 3.21e-01 | 90.0% | 17.5% |
| 1lfkA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.70 | 63.0 | 3.67e-01 | 98.0% | 13.3% |
| 1tmxB00 | 2.60.130.10 | Mainly Beta › Sandwich › Protocatechuate 3,4-Dioxygenase, subunit A › Aromatic compound dioxygenase | 0.69 | 53.0 | 3.22e-01 | 82.0% | 14.3% |
| 2rkhA02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.68 | 55.0 | 4.84e-01 | 90.0% | 59.2% |
| 3besR03 | 6.10.140.1480 | Special › Helix non-globular › Helix Hairpins › | 0.68 | 52.0 | 5.08e-01 | 84.0% | 89.3% |
| 2bsqA00 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.68 | 49.0 | 3.56e-01 | 78.0% | 28.0% |
| 2mpkA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.67 | 50.0 | 4.57e-01 | 88.0% | 60.8% |
| 2kiwA01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.65 | 51.0 | 4.20e-01 | 84.0% | 53.5% |
| 2r6fA02 | 1.20.1580.10 | Mainly Alpha › Up-down Bundle › ABC transporter ATPase like fold › ABC transporter ATPase like domain | 0.65 | 46.0 | 3.32e-01 | 78.0% | 25.2% |
| 1fp1D02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.64 | 55.0 | 3.57e-01 | 100.0% | 91.1% |
| 2lpeA01 | 6.10.140.1120 | Special › Helix non-globular › Helix Hairpins › | 0.64 | 52.0 | 4.63e-01 | 98.0% | 66.7% |
| 4fzwA02 | 1.10.12.10 | Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 | 0.62 | 49.0 | 4.75e-01 | 92.0% | 82.8% |
| 3lcnB00 | 1.10.340.40 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Nuclear abundant poly(A) RNA-bind protein 2, N-terminal domain | 0.60 | 49.0 | 3.93e-01 | 90.0% | 49.5% |
| 1vt0M05 | 6.10.280.90 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.59 | 44.0 | 3.88e-01 | 80.0% | 73.0% |
| 7vkcA01 | 1.10.1070.20 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › | 0.59 | 45.0 | 3.15e-01 | 84.0% | 88.5% |
| 4jylA02 | 1.10.12.10 | Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 | 0.57 | 44.0 | 4.43e-01 | 88.0% | 89.8% |
| 5y6qB02 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.51 | 44.0 | 3.46e-01 | 98.0% | 81.1% |
| 2kxpA01 | 3.30.1140.60 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › F-actin capping protein, alpha subunit | 0.50 | 38.0 | 3.15e-01 | 90.0% | 44.9% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3619435 | 192.8.1.36 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › M_domain | 0.93 | 87.0 | 6.81e-01 | 100.0% | 52.6% |
| 3271912 | 5033.1.1.0 ↗ | extended segments › Photosystem II reaction center protein M, PsbM › Photosystem II reaction center protein M, PsbM › Photosystem II reaction center protein M, PsbM | 0.93 | 85.0 | 6.71e-01 | 100.0% | 52.6% |
| 3416168 | 4177.1.1.4 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › IMD | 0.91 | 83.0 | 5.27e-01 | 100.0% | 22.7% |
| 5048976 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.91 | 78.0 | 5.47e-01 | 100.0% | 32.4% |
| 3315495 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.91 | 82.0 | 6.78e-01 | 100.0% | 62.4% |
| 3973453 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.90 | 83.0 | 6.97e-01 | 100.0% | 62.5% |
| 3165999 | 3291.1.1.213 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › MscS_porin | 0.90 | 82.0 | 5.24e-01 | 100.0% | 47.6% |
| 3739286 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.89 | 80.0 | 5.08e-01 | 100.0% | 22.2% |
| 3288806 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.89 | 68.0 | 4.68e-01 | 82.0% | 26.8% |
| 3575794 | 632.8.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 | 0.88 | 80.0 | 5.82e-01 | 100.0% | 40.0% |
| 5058842 | 604.5.1.0 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) | 0.87 | 79.0 | 6.40e-01 | 100.0% | 55.6% |
| 3482224 | 192.10.1.0 ↗ | alpha bundles › Long alpha-hairpin › DnaK suppressor protein DksA, alpha-hairpin domain › DnaK suppressor protein DksA, alpha-hairpin domain | 0.87 | 67.0 | 6.10e-01 | 86.0% | 63.1% |
| 3390898 | 192.1.1.0 ↗ | alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain | 0.87 | 78.0 | 6.16e-01 | 100.0% | 50.0% |
| 3248284 | 622.4.1.0 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related | 0.87 | 76.0 | 5.91e-01 | 98.0% | 46.7% |
| 3495636 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.87 | 78.0 | 4.31e-01 | 100.0% | 8.6% |
| 3764271 | 3922.1.1.348 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › CC_CDK5RAP2 | 0.87 | 76.0 | 5.66e-01 | 100.0% | 40.0% |
| 5052538 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.86 | 69.0 | 5.82e-01 | 90.0% | 53.8% |
| 3626992 | 632.8.1.2 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › Alpha-2-MRAP_C | 0.86 | 78.0 | 6.03e-01 | 100.0% | 47.6% |
| 4449117 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.86 | 76.0 | 6.46e-01 | 100.0% | 61.3% |
| 4331551 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.86 | 74.0 | 5.22e-01 | 96.0% | 32.7% |
| 3970470 | 605.1.1.174 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HAMP | 0.86 | 70.0 | 5.31e-01 | 90.0% | 39.1% |
| 3576107 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.85 | 76.0 | 5.69e-01 | 100.0% | 41.7% |
| 3277923 | 150.5.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like | 0.85 | 77.0 | 6.44e-01 | 100.0% | 65.1% |
| 4261674 | 4246.1.1.2 ↗ | a+b complex topology › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_1 | 0.85 | 75.0 | 4.48e-01 | 98.0% | 15.3% |
| 3927737 | 632.8.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 | 0.85 | 74.0 | 6.00e-01 | 100.0% | 53.7% |
| 3878682 | 11.12.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD | 0.84 | 67.0 | 4.31e-01 | 92.0% | 20.5% |
| 4942548 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.83 | 66.0 | 4.68e-01 | 88.0% | 29.3% |
| 4038742 | 150.5.1.53 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › PPE | 0.83 | 73.0 | 5.90e-01 | 100.0% | 52.6% |
| 5007978 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.82 | 71.0 | 5.24e-01 | 100.0% | 37.0% |
| 3270386 | 109.10.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Translin › Translin › Translin | 0.81 | 70.0 | 4.49e-01 | 98.0% | 20.9% |
| 3909706 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.80 | 73.0 | 6.03e-01 | 100.0% | 60.0% |
| 1068646 | 3711.1.1.2 ↗ | alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein › DUF3826 | 0.77 | 67.0 | 4.45e-01 | 100.0% | 25.5% |
| 3768875 | 150.1.1.122 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › CECR6_TMEM121 | 0.76 | 67.0 | 4.22e-01 | 98.0% | 20.8% |
| 3948731 | 192.10.1.1 ↗ | alpha bundles › Long alpha-hairpin › DnaK suppressor protein DksA, alpha-hairpin domain › DnaK suppressor protein DksA, alpha-hairpin domain › DksA_N | 0.76 | 69.0 | 5.05e-01 | 98.0% | 45.8% |
| 3905033 | 3567.1.1.9 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer › CECR6_TMEM121 | 0.76 | 66.0 | 4.35e-01 | 98.0% | 25.0% |
| 3568351 | 3390.1.1.5 ↗ | extended segments › Photosystem II reaction center protein T, PsbT › Photosystem II reaction center protein T, PsbT › Photosystem II reaction center protein T, PsbT › CECR6_TMEM121 | 0.75 | 66.0 | 4.18e-01 | 98.0% | 20.8% |
| 4954233 | 2004.1.1.49 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase | 0.74 | 58.0 | 4.12e-01 | 90.0% | 27.3% |
| 5013534 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.73 | 58.0 | 4.20e-01 | 92.0% | 29.7% |
| 3923922 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.70 | 61.0 | 5.37e-01 | 100.0% | 68.0% |
| 5047626 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 58.0 | 4.34e-01 | 100.0% | 47.2% |
| 3580104 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.61 | 50.0 | 4.21e-01 | 98.0% | 54.7% |
D2
medium
residues 155-233
Domain cluster:
rep: hypothetical_protein_EhV235__YP_293990__Emiliania_huxleyi_virus_86__181082__D131-195