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hypothetical_protein_EhV403
Euk-VirEmiliania_huxleyi_virus_86
hypothetical_protein_EhV403__YP_294161__Emiliania_huxleyi_virus_86__181082
Identity
- Accession:
- YP_294161 ↗
- Protein ID:
- hypothetical_protein_EhV403
- Kingdom:
- euk
Quality
67.2
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Algavirales›
Phycodnaviridae›
Coccolithovirus›
Emiliania_huxleyi_virus_86
TaxID: 181082
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 16-98
Domain cluster:
representative
CATH (83)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3u0cA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.96 | 89.0 | 7.04e-01 | 100.0% | 53.0% |
| 4l0rB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.95 | 81.0 | 8.63e-01 | 92.8% | 100.0% |
| 1lrzA03 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.94 | 68.0 | 7.89e-01 | 100.0% | 100.0% |
| 3a8pA02 | 6.10.140.680 | Special › Helix non-globular › Helix Hairpins › | 0.94 | 81.0 | 7.08e-01 | 94.0% | 64.9% |
| 2dq0A01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.93 | 84.0 | 7.55e-01 | 97.6% | 72.9% |
| 3qo8A01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.93 | 80.0 | 7.27e-01 | 97.6% | 70.8% |
| 1skvA00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.93 | 67.0 | 7.62e-01 | 95.2% | 96.9% |
| 2rd0B00 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.93 | 88.0 | 7.20e-01 | 100.0% | 64.0% |
| 3mq1A01 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.92 | 75.0 | 7.20e-01 | 90.4% | 76.1% |
| 1cxzB00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.92 | 74.0 | 7.36e-01 | 88.0% | 81.4% |
| 2qywA00 | 1.20.58.400 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins | 0.92 | 74.0 | 7.04e-01 | 89.2% | 73.7% |
| 2rkhA02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.90 | 66.0 | 6.98e-01 | 80.7% | 82.9% |
| 3m7gA02 | 1.10.8.1010 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.90 | 67.0 | 6.36e-01 | 83.1% | 67.4% |
| 7sgrA02 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.89 | 84.0 | 5.47e-01 | 100.0% | 27.1% |
| 1x4tA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.89 | 61.0 | 7.16e-01 | 73.5% | 100.0% |
| 2ch7A00 | 1.10.287.950 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein | 0.89 | 83.0 | 5.44e-01 | 100.0% | 27.2% |
| 1qsdA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.89 | 81.0 | 7.45e-01 | 96.4% | 79.4% |
| 2r9iA00 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.89 | 72.0 | 7.76e-01 | 89.2% | 98.6% |
| 4lwsA00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.89 | 83.0 | 7.72e-01 | 100.0% | 86.0% |
| 3g67A00 | 1.10.287.950 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein | 0.89 | 82.0 | 5.94e-01 | 100.0% | 39.9% |
| 2cazC00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.89 | 64.0 | 7.20e-01 | 80.7% | 96.9% |
| 4fzsA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.89 | 82.0 | 5.91e-01 | 100.0% | 39.2% |
| 3hr0B01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.88 | 77.0 | 7.95e-01 | 92.8% | 98.7% |
| 3vkgA12 | 1.10.287.2610 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.88 | 83.0 | 5.91e-01 | 100.0% | 38.6% |
| 6v9zA02 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.88 | 83.0 | 5.35e-01 | 100.0% | 25.8% |
| 1tjlA00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.88 | 74.0 | 5.99e-01 | 88.0% | 56.6% |
| 1l8dA00 | 1.10.287.510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.88 | 82.0 | 7.58e-01 | 100.0% | 93.2% |
| 3icxA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.88 | 73.0 | 7.69e-01 | 96.4% | 97.3% |
| 1t7sA00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.88 | 74.0 | 6.24e-01 | 96.4% | 57.4% |
| 3k29A00 | 1.10.287.1700 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.88 | 81.0 | 6.37e-01 | 100.0% | 68.9% |
| 1rq0A01 | 6.10.140.160 | Special › Helix non-globular › Helix Hairpins › | 0.88 | 67.0 | 6.77e-01 | 81.9% | 79.5% |
| 2dw4A03 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.88 | 84.0 | 7.72e-01 | 100.0% | 82.2% |
| 3fppA03 | 6.10.140.1990 | Special › Helix non-globular › Helix Hairpins › | 0.88 | 73.0 | 7.14e-01 | 100.0% | 83.0% |
| 1zpyA00 | 6.10.140.1960 | Special › Helix non-globular › Helix Hairpins › | 0.87 | 63.0 | 6.16e-01 | 80.7% | 69.2% |
| 6gy8A01 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.86 | 80.0 | 5.20e-01 | 100.0% | 49.4% |
| 7wivA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.86 | 80.0 | 5.25e-01 | 100.0% | 26.7% |
| 6xj1A01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.86 | 80.0 | 5.56e-01 | 100.0% | 43.7% |
| 4mtxD00 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.85 | 65.0 | 6.19e-01 | 85.5% | 69.5% |
| 2hh7A00 | 1.20.58.1000 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer | 0.85 | 67.0 | 6.71e-01 | 100.0% | 80.0% |
| 5y06A01 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.85 | 74.0 | 5.19e-01 | 91.6% | 75.1% |
| 2q0oC00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.85 | 70.0 | 6.95e-01 | 88.0% | 86.0% |
| 4aifA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.84 | 54.0 | 4.38e-01 | 71.1% | 37.5% |
| 1fs0G02 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.84 | 74.0 | 7.27e-01 | 94.0% | 96.6% |
| 4q4hA01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.84 | 78.0 | 5.10e-01 | 100.0% | 26.1% |
| 7metA01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.84 | 77.0 | 5.07e-01 | 100.0% | 27.8% |
| 3vbbE01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.83 | 73.0 | 6.35e-01 | 92.8% | 82.4% |
| 3na7A00 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.83 | 75.0 | 5.34e-01 | 100.0% | 36.3% |
| 2gl2B00 | 1.10.287.1700 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.83 | 77.0 | 6.94e-01 | 100.0% | 77.1% |
| 1ydxA02 | 1.10.287.1120 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein | 0.83 | 75.0 | 7.26e-01 | 100.0% | 88.9% |
| 1sg2A00 | 3.30.910.20 | Alpha Beta › 2-Layer Sandwich › Protein Binding, DinI Protein; Chain A › Skp domain | 0.82 | 73.0 | 6.00e-01 | 100.0% | 56.0% |
| 6q45G01 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.82 | 75.0 | 6.12e-01 | 100.0% | 63.7% |
| 4i0xG00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.82 | 63.0 | 6.82e-01 | 88.0% | 100.0% |
| 2p7vA00 | 1.20.120.1370 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Regulator of RNA polymerase sigma(70) subunit, domain 4 | 0.82 | 70.0 | 5.67e-01 | 96.4% | 51.0% |
| 4ijjB00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.81 | 68.0 | 5.79e-01 | 92.8% | 57.7% |
| 4iloA00 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.81 | 73.0 | 5.22e-01 | 100.0% | 36.0% |
| 3zdqA01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.81 | 73.0 | 4.82e-01 | 100.0% | 25.8% |
| 1avoB00 | 1.20.120.180 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Proteasome activator pa28, C-terminal domain | 0.80 | 74.0 | 6.08e-01 | 100.0% | 58.6% |
| 4ioeA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.80 | 67.0 | 6.61e-01 | 90.4% | 96.6% |
| 3lnnB03 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.80 | 61.0 | 6.62e-01 | 92.8% | 100.0% |
| 4h63K00 | 1.10.287.3490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.79 | 64.0 | 6.06e-01 | 91.6% | 73.5% |
| 3cwzB01 | 1.20.58.900 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › RUN domain | 0.79 | 69.0 | 5.57e-01 | 92.8% | 75.3% |
| 1vf7A03 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.79 | 55.0 | 6.19e-01 | 84.3% | 100.0% |
| 2xubA05 | 6.10.140.1450 | Special › Helix non-globular › Helix Hairpins › | 0.79 | 71.0 | 6.77e-01 | 98.8% | 99.0% |
| 4dciA00 | 6.10.140.1110 | Special › Helix non-globular › Helix Hairpins › | 0.78 | 71.0 | 5.82e-01 | 100.0% | 55.8% |
| 2vs0A00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.78 | 66.0 | 6.67e-01 | 100.0% | 93.9% |
| 1rx0A03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.78 | 67.0 | 5.39e-01 | 92.8% | 50.3% |
| 3favD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.78 | 66.0 | 6.79e-01 | 91.6% | 100.0% |
| 1wleA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.78 | 69.0 | 6.18e-01 | 100.0% | 71.1% |
| 4iggA01 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.77 | 59.0 | 6.41e-01 | 90.4% | 100.0% |
| 4w4kA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.77 | 68.0 | 6.90e-01 | 100.0% | 98.8% |
| 4l8jA04 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.77 | 53.0 | 6.06e-01 | 80.7% | 100.0% |
| 2lw1A00 | 1.10.287.380 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain | 0.76 | 63.0 | 6.29e-01 | 89.2% | 88.2% |
| 7zmgL01 | 1.10.287.3510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.76 | 54.0 | 5.49e-01 | 100.0% | 76.2% |
| 4h63H01 | 1.20.58.1710 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.76 | 61.0 | 6.46e-01 | 85.5% | 98.6% |
| 2pg0A03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.74 | 63.0 | 5.18e-01 | 92.8% | 51.7% |
| 2lm9A00 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.73 | 59.0 | 5.62e-01 | 86.7% | 76.0% |
| 3syvA01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.72 | 63.0 | 4.55e-01 | 100.0% | 34.3% |
| 3fxdB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.71 | 48.0 | 5.40e-01 | 89.2% | 98.3% |
| 2uuiA00 | 1.20.120.550 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Membrane associated eicosanoid/glutathione metabolism-like domain | 0.69 | 57.0 | 4.63e-01 | 91.6% | 47.7% |
| 1wpaA01 | 6.10.140.340 | Special › Helix non-globular › Helix Hairpins › | 0.67 | 58.0 | 5.51e-01 | 100.0% | 85.9% |
| 1c17M00 | 1.20.120.220 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › ATP synthase, F0 complex, subunit A | 0.63 | 51.0 | 4.33e-01 | 90.4% | 99.3% |
| 2uv8A07 | 6.10.140.1410 | Special › Helix non-globular › Helix Hairpins › | 0.62 | 48.0 | 4.85e-01 | 81.9% | 83.5% |
| 2vkzA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.58 | 50.0 | 3.59e-01 | 100.0% | 49.6% |
ECOD (86)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4936790 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.97 | 86.0 | 7.76e-01 | 100.0% | 72.4% |
| 3671630 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.96 | 83.0 | 7.36e-01 | 98.8% | 67.3% |
| 4017285 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.96 | 93.0 | 6.76e-01 | 100.0% | 48.9% |
| 5009131 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.96 | 84.0 | 6.46e-01 | 100.0% | 46.1% |
| 3600956 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.95 | 84.0 | 6.15e-01 | 100.0% | 40.0% |
| 5063166 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.95 | 83.0 | 7.51e-01 | 98.8% | 71.4% |
| 3207569 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.94 | 90.0 | 6.51e-01 | 100.0% | 45.0% |
| 3073109 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.94 | 81.0 | 8.60e-01 | 89.2% | 100.0% |
| 3654714 | 5086.1.1.89 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › KIF21A_4th | 0.94 | 90.0 | 6.52e-01 | 100.0% | 42.6% |
| 5036054 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.94 | 89.0 | 5.37e-01 | 100.0% | 18.1% |
| 3843241 | 108.1.1.25 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_4 | 0.94 | 89.0 | 6.02e-01 | 100.0% | 31.9% |
| 3743191 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.94 | 89.0 | 6.54e-01 | 100.0% | 84.2% |
| 3215140 | 3939.1.1.190 ↗ | alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › KIF21A_4th | 0.94 | 87.0 | 6.68e-01 | 97.6% | 78.8% |
| 3498458 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.93 | 89.0 | 6.85e-01 | 100.0% | 50.3% |
| 3413926 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.93 | 89.0 | 5.92e-01 | 98.8% | 30.9% |
| 3435096 | 192.29.1.216 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › DUF632 | 0.93 | 89.0 | 7.69e-01 | 100.0% | 70.0% |
| 3657504 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.93 | 90.0 | 7.36e-01 | 100.0% | 66.7% |
| 3729994 | 3755.3.1.284 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › Utp11 | 0.93 | 78.0 | 6.49e-01 | 95.2% | 55.4% |
| 3594586 | 192.7.1.0 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm | 0.93 | 85.0 | 8.08e-01 | 100.0% | 84.2% |
| 4984240 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.93 | 88.0 | 5.11e-01 | 100.0% | 50.8% |
| 3872955 | 109.4.1.2380 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, TPR_8, TPR_10, TPR_12, TPR_MalT | 0.93 | 85.0 | 5.06e-01 | 100.0% | 16.3% |
| 3671258 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.92 | 87.0 | 7.32e-01 | 100.0% | 90.8% |
| 3339157 | 3755.3.1.370 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF632 | 0.92 | 88.0 | 7.84e-01 | 100.0% | 76.4% |
| 3465330 | 4177.1.1.11 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › DUF632 | 0.92 | 88.0 | 6.69e-01 | 100.0% | 49.4% |
| 3852269 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.92 | 87.0 | 7.01e-01 | 100.0% | 62.1% |
| 3609516 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.92 | 87.0 | 6.59e-01 | 100.0% | 49.1% |
| 4387171 | 603.5.1.18 ↗ | alpha bundles › STAT-like › FlgN-like › FlgN-like › Med30 | 0.92 | 88.0 | 6.89e-01 | 100.0% | 69.0% |
| 3408532 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.92 | 87.0 | 6.62e-01 | 100.0% | 57.1% |
| 4952360 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.92 | 82.0 | 4.99e-01 | 94.0% | 19.5% |
| 5026581 | 1203.1.2.0 ↗ | alpha bundles › Shroom domain 2 › Shroom domain 2 › Human SD2 | 0.91 | 87.0 | 6.76e-01 | 100.0% | 51.9% |
| 3679787 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.91 | 87.0 | 5.83e-01 | 100.0% | 31.9% |
| 3605251 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.91 | 87.0 | 6.18e-01 | 100.0% | 92.1% |
| 3609803 | 4177.1.1.5 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › Vps5 | 0.91 | 86.0 | 5.96e-01 | 100.0% | 46.3% |
| 3872357 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.91 | 86.0 | 4.84e-01 | 100.0% | 60.5% |
| 5079925 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.91 | 86.0 | 6.40e-01 | 100.0% | 44.9% |
| 3390311 | 604.7.1.0 ↗ | alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A | 0.90 | 86.0 | 7.69e-01 | 100.0% | 75.5% |
| 3229095 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.90 | 78.0 | 7.28e-01 | 100.0% | 76.0% |
| 5041482 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.90 | 82.0 | 7.78e-01 | 96.4% | 91.6% |
| 5008718 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.90 | 85.0 | 5.13e-01 | 100.0% | 25.7% |
| 3382811 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.90 | 85.0 | 5.18e-01 | 100.0% | 19.8% |
| 3935107 | 192.7.1.0 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm | 0.89 | 81.0 | 7.29e-01 | 96.4% | 72.7% |
| 4932755 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.88 | 80.0 | 5.81e-01 | 100.0% | 39.0% |
| 3782889 | 4177.1.1.5 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › Vps5 | 0.88 | 82.0 | 5.91e-01 | 100.0% | 38.6% |
| 4665988 | 192.7.1.0 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm | 0.88 | 74.0 | 6.80e-01 | 97.6% | 70.5% |
| 3615471 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.88 | 74.0 | 6.60e-01 | 88.0% | 66.4% |
| 3805780 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.88 | 82.0 | 5.77e-01 | 100.0% | 36.1% |
| 3355297 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.88 | 81.0 | 6.98e-01 | 100.0% | 73.6% |
| 3713604 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.87 | 81.0 | 5.26e-01 | 100.0% | 31.1% |
| 4061849 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.87 | 80.0 | 7.20e-01 | 97.6% | 73.6% |
| 4929584 | 4992.1.1.0 ↗ | extended segments › RelB-like › RelB-like › RelB-like | 0.86 | 81.0 | 6.83e-01 | 100.0% | 64.6% |
| 3402327 | 3755.3.1.324 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF725 | 0.86 | 80.0 | 6.20e-01 | 100.0% | 50.6% |
| 3743161 | 4177.1.1.7 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › Pil1 | 0.86 | 75.0 | 5.41e-01 | 100.0% | 35.5% |
| 3991276 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.85 | 79.0 | 5.35e-01 | 100.0% | 30.2% |
| 3389783 | 5030.1.1.0 ↗ | extended segments › Photosystem II reaction center protein L, PsbL › Photosystem II reaction center protein L, PsbL › Photosystem II reaction center protein L, PsbL | 0.85 | 76.0 | 6.95e-01 | 100.0% | 75.2% |
| 3342823 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.85 | 75.0 | 6.64e-01 | 100.0% | 68.7% |
| 3445974 | 1075.4.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane | 0.85 | 78.0 | 5.19e-01 | 100.0% | 28.9% |
| 3999727 | 1075.4.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane | 0.85 | 79.0 | 4.91e-01 | 100.0% | 31.7% |
| 3596860 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.85 | 78.0 | 5.48e-01 | 100.0% | 37.5% |
| 3556700 | 1075.4.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane | 0.84 | 78.0 | 5.07e-01 | 100.0% | 25.5% |
| 4025973 | 1075.4.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane | 0.84 | 79.0 | 5.14e-01 | 100.0% | 27.0% |
| 4429259 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.84 | 68.0 | 5.60e-01 | 94.0% | 49.7% |
| 3700567 | 1075.4.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane | 0.83 | 76.0 | 4.93e-01 | 100.0% | 28.5% |
| 4571188 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.82 | 77.0 | 6.48e-01 | 100.0% | 63.8% |
| 3755476 | 3755.1.1.0 ↗ | alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related | 0.82 | 74.0 | 5.76e-01 | 100.0% | 47.4% |
| 4541195 | 3755.3.1.470 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › T3SSipB | 0.82 | 74.0 | 6.34e-01 | 100.0% | 63.8% |
| 4581983 | 5086.1.1.13 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › T3SSipB | 0.82 | 74.0 | 6.18e-01 | 100.0% | 59.3% |
| 3254136 | 1075.4.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane | 0.81 | 72.0 | 4.75e-01 | 96.4% | 28.9% |
| 4014285 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.81 | 73.0 | 5.10e-01 | 100.0% | 34.1% |
| 3699463 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.81 | 72.0 | 5.32e-01 | 100.0% | 38.6% |
| 4001533 | 1075.4.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane | 0.80 | 74.0 | 5.27e-01 | 100.0% | 37.4% |
| 3201572 | 4177.1.1.7 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › Pil1 | 0.80 | 73.0 | 5.07e-01 | 100.0% | 33.3% |
| 5048800 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.80 | 73.0 | 5.54e-01 | 100.0% | 44.9% |
| 3596751 | 1075.4.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold | 0.80 | 72.0 | 4.70e-01 | 100.0% | 24.3% |
| 4978786 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.80 | 73.0 | 4.27e-01 | 100.0% | 55.6% |
| 3824360 | 1075.4.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane | 0.79 | 71.0 | 4.69e-01 | 100.0% | 25.1% |
| 4806319 | 3755.1.1.2 ↗ | alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related › YscO-like | 0.79 | 68.0 | 6.84e-01 | 94.0% | 94.0% |
| 3763838 | 1075.4.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane | 0.79 | 72.0 | 4.71e-01 | 100.0% | 25.8% |
| 3725261 | 4177.1.1.1 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH | 0.79 | 71.0 | 4.81e-01 | 100.0% | 42.7% |
| 4024105 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.78 | 70.0 | 4.85e-01 | 100.0% | 49.1% |
| 3613914 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.77 | 64.0 | 6.63e-01 | 91.6% | 100.0% |
| 3584613 | 1075.4.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane | 0.77 | 69.0 | 4.66e-01 | 100.0% | 39.3% |
| 4026286 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.76 | 68.0 | 5.80e-01 | 98.8% | 62.2% |
| 3699787 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.76 | 67.0 | 4.83e-01 | 100.0% | 55.0% |
| 3906467 | 1008.1.1.106 ↗ | alpha bundles › BRCC36 C-terminal helical domain › BRCC36 C-terminal helical domain › BRCC36 C-terminal helical domain › CSN5_C | 0.75 | 68.0 | 6.63e-01 | 100.0% | 93.3% |
| 3245542 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.74 | 64.0 | 5.62e-01 | 94.0% | 65.0% |
| 3513582 | 192.8.1.36 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › M_domain | 0.72 | 62.0 | 5.68e-01 | 97.6% | 72.7% |
D2
medium
residues 225-275
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04947.20 best | Pox_VLTF3 | 41.7 | 1.50e-10 | 100.0% | 29.8% |
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3d5lB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 58.0 | 4.68e-01 | 100.0% | 46.1% |
| 2f48A03 | 1.10.10.480 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Phosphofructokinase; domain 3 | 0.70 | 59.0 | 5.32e-01 | 100.0% | 77.3% |
| 6rxaA01 | 1.10.40.30 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) | 0.69 | 60.0 | 5.10e-01 | 100.0% | 60.9% |
| 1xoiA01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.67 | 55.0 | 3.20e-01 | 96.1% | 19.6% |
| 4wv4B00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.66 | 49.0 | 4.10e-01 | 82.4% | 49.5% |
| 5c00D00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.66 | 53.0 | 3.70e-01 | 96.1% | 69.6% |
| 8bs9A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.64 | 47.0 | 2.91e-01 | 80.4% | 19.0% |
| 3ddhA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.63 | 53.0 | 4.61e-01 | 96.1% | 80.2% |
| 3deeA01 | 1.10.150.690 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DUF2063 | 0.62 | 50.0 | 4.33e-01 | 94.1% | 61.6% |
| 2pgeA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.62 | 51.0 | 3.98e-01 | 100.0% | 95.3% |
| 3h20A04 | 1.10.1240.50 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › | 0.61 | 52.0 | 4.41e-01 | 100.0% | 57.3% |
| 2oxlA00 | 1.20.5.5260 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.61 | 48.0 | 4.65e-01 | 96.1% | 87.1% |
| 1fc3B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 51.0 | 4.18e-01 | 100.0% | 68.3% |
| 2gfhA02 | 1.20.120.710 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Haloacid dehalogenase hydrolase-like domain | 0.59 | 49.0 | 4.27e-01 | 100.0% | 60.5% |
| 2da4A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.59 | 45.0 | 4.32e-01 | 100.0% | 71.2% |
| 1z7mC00 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.59 | 46.0 | 2.94e-01 | 90.2% | 90.4% |
| 1ac1A00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.57 | 46.0 | 3.25e-01 | 96.1% | 29.8% |
| 1irxA05 | 1.10.10.350 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.55 | 46.0 | 3.92e-01 | 100.0% | 82.8% |
| 3zdrA02 | 1.20.1090.10 | Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain | 0.55 | 40.0 | 2.83e-01 | 86.3% | 61.9% |
| 1hzfA00 | 1.50.10.20 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.55 | 41.0 | 2.59e-01 | 80.4% | 34.1% |
| 1t0fA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 43.0 | 3.70e-01 | 100.0% | 66.7% |
| 3lstA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 46.0 | 2.99e-01 | 98.0% | 62.3% |
| 2pkeA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.54 | 43.0 | 3.93e-01 | 100.0% | 85.9% |
| 2oifB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.54 | 42.0 | 3.24e-01 | 100.0% | 86.1% |
| 2e18A00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.53 | 42.0 | 2.79e-01 | 94.1% | 62.9% |
| 4ip8A00 | 1.10.132.110 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Serum amyloid A protein | 0.51 | 44.0 | 3.55e-01 | 100.0% | 52.4% |
| 2vqgA00 | 1.10.10.1280 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Alpha-helical porin B/porin C | 0.51 | 44.0 | 3.91e-01 | 100.0% | 86.8% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3973793 | 2004.1.1.42 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE | 0.78 | 67.0 | 3.97e-01 | 100.0% | 15.1% |
| 5068908 | 101.1.2.181 ↗ | alpha arrays › HTH › HTH › winged helix domain › MCM_C | 0.78 | 64.0 | 5.72e-01 | 100.0% | 64.0% |
| 3788184 | 6155.1.1.0 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter | 0.71 | 51.0 | 3.68e-01 | 76.5% | 30.0% |
| 3286911 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 59.0 | 5.45e-01 | 100.0% | 81.4% |
| 3184216 | 101.1.17.19 ↗ | alpha arrays › HTH › HTH › FF domain › DEK_C | 0.70 | 58.0 | 5.48e-01 | 100.0% | 80.0% |
| 3357591 | 101.1.1.176 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DEK_C | 0.70 | 58.0 | 5.21e-01 | 100.0% | 66.7% |
| 4128053 | 101.35.1.0 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX | 0.69 | 57.0 | 5.61e-01 | 100.0% | 87.3% |
| 4950612 | 108.4.1.3 ↗ | alpha arrays › EF-hand › Hypothetical protein MTH865 › Hypothetical protein MTH865 › DUF2795 | 0.68 | 58.0 | 5.57e-01 | 100.0% | 93.3% |
| 5025917 | 101.1.2.181 ↗ | alpha arrays › HTH › HTH › winged helix domain › MCM_C | 0.67 | 55.0 | 5.13e-01 | 100.0% | 73.8% |
| 3941274 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.67 | 55.0 | 4.81e-01 | 100.0% | 61.2% |
| 4988614 | 101.1.2.181 ↗ | alpha arrays › HTH › HTH › winged helix domain › MCM_C | 0.65 | 55.0 | 5.17e-01 | 100.0% | 82.8% |
| 3610347 | 103.2.1.0 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone | 0.65 | 51.0 | 4.39e-01 | 88.2% | 68.2% |
| 3700467 | 101.1.2.97 ↗ | alpha arrays › HTH › HTH › winged helix domain › RPA_C | 0.64 | 53.0 | 4.67e-01 | 100.0% | 63.1% |
| 4927310 | 4953.1.1.4 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ASL_C2 | 0.64 | 52.0 | 4.42e-01 | 98.0% | 69.5% |
| 3534466 | 101.1.17.0 ↗ | alpha arrays › HTH › HTH › FF domain | 0.63 | 52.0 | 4.93e-01 | 100.0% | 84.6% |
| 5046952 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.61 | 46.0 | 2.89e-01 | 88.2% | 51.0% |
| 4948444 | 2006.1.1.18 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 | 0.60 | 47.0 | 3.25e-01 | 96.1% | 23.0% |
| 3660998 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.59 | 44.0 | 2.56e-01 | 80.4% | 59.1% |
| 4997259 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.56 | 43.0 | 3.45e-01 | 88.2% | 52.2% |
| 3304429 | 604.9.1.0 ↗ | alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 | 0.56 | 42.0 | 3.97e-01 | 84.3% | 78.5% |
| 342523 | 3520.1.1.1 ↗ | alpha arrays › Porin B (PorB) › Porin B (PorB) › Porin B (PorB) › PorB | 0.56 | 41.0 | 3.73e-01 | 86.3% | 67.5% |
| 2407303 | 2005.1.1.25 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › HIGH_NTase1 | 0.55 | 42.0 | 2.67e-01 | 82.4% | 63.6% |
| 3519233 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 43.0 | 2.70e-01 | 86.3% | 17.1% |
| 3474334 | 109.4.1.1316 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Suf, HAT_PRP39_N, HAT_PRP39_C | 0.52 | 42.0 | 2.43e-01 | 94.1% | 9.0% |
| 3311033 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 38.0 | 2.78e-01 | 82.4% | 27.3% |
| 3901327 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.51 | 38.0 | 2.97e-01 | 80.4% | 62.6% |
| 3336002 | 192.3.1.1 ↗ | alpha bundles › Long alpha-hairpin › Fe,Mn superoxide dismutase (SOD), N-terminal domain › Fe,Mn superoxide dismutase (SOD), N-terminal domain › Sod_Fe_N | 0.51 | 42.0 | 3.59e-01 | 96.1% | 54.4% |