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hypothetical_protein_EhV460
Euk-VirEmiliania_huxleyi_virus_86
hypothetical_protein_EhV460__YP_294218__Emiliania_huxleyi_virus_86__181082
Identity
- Accession:
- YP_294218 ↗
- Protein ID:
- hypothetical_protein_EhV460
- Kingdom:
- euk
Quality
76.2
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Algavirales›
Phycodnaviridae›
Coccolithovirus›
Emiliania_huxleyi_virus_86
TaxID: 181082
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-76
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4aflA00 | 6.10.140.1740 | Special › Helix non-globular › Helix Hairpins › | 0.81 | 55.0 | 4.68e-01 | 73.8% | 45.1% |
| 3lnrA00 | 1.20.120.1530 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.78 | 65.0 | 4.76e-01 | 96.9% | 35.6% |
| 4w4kA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.78 | 70.0 | 6.45e-01 | 100.0% | 78.0% |
| 6xpdA01 | 1.20.1510.10 | Mainly Alpha › Up-down Bundle › Alpha-lytic protease prodomain-like › Cation efflux protein transmembrane domain | 0.78 | 67.0 | 4.64e-01 | 98.5% | 30.2% |
| 3zgxA02 | 6.10.140.1720 | Special › Helix non-globular › Helix Hairpins › | 0.77 | 66.0 | 5.80e-01 | 95.4% | 64.8% |
| 6jkvA00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.76 | 54.0 | 3.62e-01 | 73.8% | 21.3% |
| 3f1iS00 | 1.20.5.1940 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.75 | 57.0 | 5.34e-01 | 80.0% | 97.4% |
| 3nyjA00 | 1.20.120.770 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Amyloid precursor protein, E2 domain | 0.73 | 65.0 | 4.72e-01 | 100.0% | 39.2% |
| 3qa8A04 | 1.20.1270.250 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.72 | 66.0 | 4.42e-01 | 100.0% | 77.3% |
| 4ijjB00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.72 | 57.0 | 4.46e-01 | 92.3% | 42.3% |
| 2oarB00 | 1.10.1200.120 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Large-conductance mechanosensitive channel, MscL; domain 1 | 0.72 | 58.0 | 4.71e-01 | 89.2% | 61.6% |
| 4am6A03 | 3.30.420.580 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.72 | 56.0 | 3.70e-01 | 87.7% | 21.3% |
| 2olpA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.71 | 51.0 | 3.83e-01 | 81.5% | 32.5% |
| 5b1aC01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.67 | 51.0 | 5.02e-01 | 80.0% | 79.4% |
| 7watB02 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.65 | 51.0 | 3.27e-01 | 86.2% | 23.9% |
| 2z3xA00 | 6.10.10.80 | Special › Helix non-globular › Helicase, Ruva Protein; domain 3 › Small, acid-soluble spore protein, alpha/beta type-like | 0.64 | 45.0 | 4.79e-01 | 73.8% | 87.5% |
| 1wpaA01 | 6.10.140.340 | Special › Helix non-globular › Helix Hairpins › | 0.63 | 49.0 | 4.24e-01 | 83.1% | 90.9% |
| 1ho8A02 | 1.25.40.150 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › V-type ATPase, subunit H, C-terminal domain | 0.62 | 40.0 | 3.35e-01 | 72.3% | 39.3% |
| 2v4jA01 | 6.10.140.1420 | Special › Helix non-globular › Helix Hairpins › | 0.60 | 41.0 | 4.22e-01 | 70.8% | 87.3% |
| 2r6fA02 | 1.20.1580.10 | Mainly Alpha › Up-down Bundle › ABC transporter ATPase like fold › ABC transporter ATPase like domain | 0.60 | 37.0 | 2.84e-01 | 72.3% | 26.5% |
| 2qgmA02 | 3.30.1870.10 | Alpha Beta › 2-Layer Sandwich › EreA/ChaN-like, small alpha-beta sandwich › EreA-like; domain 2 | 0.54 | 35.0 | 3.44e-01 | 73.8% | 59.7% |
| 3s7zA01 | 3.40.50.1860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 36.0 | 2.92e-01 | 72.3% | 58.1% |
| 4dbgB01 | 6.10.140.1100 | Special › Helix non-globular › Helix Hairpins › | 0.50 | 25.0 | 2.76e-01 | 76.9% | 55.3% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3607008 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.79 | 62.0 | 5.41e-01 | 98.5% | 56.8% |
| 3518386 | 192.1.1.0 ↗ | alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain | 0.78 | 54.0 | 5.16e-01 | 81.5% | 62.7% |
| 3980042 | 5043.1.1.14 ↗ | extended segments › Sensor proteins transmembrane domains › Htr2 transmembrane domain-like › Htr2 transmembrane domain-like › DUF997 | 0.76 | 57.0 | 5.76e-01 | 83.1% | 80.0% |
| 3941696 | 605.1.1.210 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › DUF997 | 0.75 | 57.0 | 5.73e-01 | 83.1% | 80.0% |
| 5039649 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.75 | 67.0 | 5.41e-01 | 96.9% | 53.3% |
| 3514794 | 5057.1.1.1 ↗ | alpha bundles › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neur_chan_memb | 0.74 | 63.0 | 5.03e-01 | 90.8% | 53.3% |
| 3212246 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.72 | 63.0 | 4.63e-01 | 100.0% | 82.3% |
| 1872685 | 2484.1.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin | 0.72 | 56.0 | 3.42e-01 | 87.7% | 14.1% |
| 4956455 | 4163.1.2.0 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF2 C-terminal domain-like | 0.71 | 49.0 | 4.16e-01 | 73.8% | 46.0% |
| 3990495 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.68 | 51.0 | 4.43e-01 | 81.5% | 77.0% |
| 5031064 | 604.3.1.0 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain | 0.67 | 48.0 | 4.07e-01 | 80.0% | 48.0% |
| None | — | 0.66 | 58.0 | 4.13e-01 | 100.0% | 35.5% | |
| 3509201 | 1008.1.1.1 ↗ | alpha bundles › BRCC36 C-terminal helical domain › BRCC36 C-terminal helical domain › BRCC36 C-terminal helical domain › BRCC36_C | 0.63 | 54.0 | 5.00e-01 | 100.0% | 85.9% |
| 3771708 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.62 | 56.0 | 3.83e-01 | 100.0% | 90.2% |
| 4176207 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 43.0 | 3.22e-01 | 73.8% | 38.0% |
| 3817621 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.59 | 38.0 | 2.39e-01 | 76.9% | 10.9% |
| None | — | 0.58 | 44.0 | 2.88e-01 | 83.1% | 19.6% | |
| 3557037 | 109.4.1.893 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › UTP6_C | 0.53 | 38.0 | 2.96e-01 | 78.5% | 60.0% |
| 3981680 | 3352.1.1.2 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PMT_2 | 0.52 | 47.0 | 2.90e-01 | 100.0% | 63.3% |