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hypothetical_protein_GMAR_ORF110
Euk-VirGolden_Marseillevirus
hypothetical_protein_GMAR_ORF110__YP_009310226__Golden_Marseillevirus__1720526
Identity
- Accession:
- YP_009310226 ↗
- Protein ID:
- hypothetical_protein_GMAR_ORF110
- Kingdom:
- euk
Quality
71.7
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Pimascovirales›
Marseilleviridae›
Marseillevirus›
Golden_Marseillevirus
TaxID: 1720526
Cluster
View cluster (94 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-129
Domain cluster:
representative
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1i78B00 | 2.40.128.90 | Mainly Beta › Beta Barrel › Lipocalin › OMPT-like | 0.72 | 59.0 | 4.55e-01 | 88.4% | 92.7% |
| 2vckA00 | 3.40.1500.20 | Alpha Beta › 3-Layer(aba) Sandwich › oxygen-dependent coproporphyrinogen oxidase › | 0.71 | 52.0 | 4.37e-01 | 75.2% | 61.1% |
| 2wjqA00 | 2.40.160.40 | Mainly Beta › Beta Barrel › Porin › monomeric porin ompg | 0.66 | 54.0 | 4.64e-01 | 87.6% | 84.9% |
| 4fqeA00 | 2.40.160.40 | Mainly Beta › Beta Barrel › Porin › monomeric porin ompg | 0.63 | 52.0 | 4.73e-01 | 87.6% | 83.5% |
| 5esyA01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.61 | 43.0 | 3.62e-01 | 72.9% | 70.1% |
| 4ghbA00 | 2.40.160.190 | Mainly Beta › Beta Barrel › Porin › | 0.59 | 54.0 | 4.30e-01 | 99.2% | 73.3% |
| 1p32B00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.59 | 42.0 | 3.85e-01 | 74.4% | 58.5% |
| 1vyfA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.58 | 39.0 | 3.88e-01 | 87.6% | 65.2% |
| 4o7iA01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.57 | 45.0 | 4.03e-01 | 82.2% | 81.3% |
| 5gv0A00 | 2.40.160.110 | Mainly Beta › Beta Barrel › Porin › | 0.56 | 43.0 | 4.01e-01 | 80.6% | 95.7% |
| 3bdrA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.56 | 42.0 | 3.91e-01 | 98.4% | 64.1% |
| 6c1zA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 37.0 | 3.69e-01 | 72.9% | 64.5% |
| 4akmB00 | 2.40.160.110 | Mainly Beta › Beta Barrel › Porin › | 0.55 | 43.0 | 4.02e-01 | 81.4% | 95.5% |
| 3dgtA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 41.0 | 3.28e-01 | 80.6% | 71.2% |
| 1ydwA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.54 | 42.0 | 3.60e-01 | 83.7% | 49.8% |
| 2xe4A02 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.54 | 47.0 | 3.55e-01 | 99.2% | 58.2% |
| 2wjsA02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 37.0 | 3.33e-01 | 71.3% | 61.7% |
| 5jozB02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 37.0 | 3.22e-01 | 72.1% | 58.3% |
| 3w7tA01 | 2.70.98.50 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › putative glycoside hydrolase family protein from bacillus halodurans | 0.52 | 39.0 | 3.17e-01 | 76.0% | 97.0% |
| 4ok4A02 | 2.70.98.70 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.52 | 46.0 | 3.35e-01 | 96.9% | 87.5% |
| 1cbiA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.52 | 36.0 | 3.55e-01 | 72.9% | 66.2% |
| 7ne4A01 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.52 | 45.0 | 3.47e-01 | 99.2% | 60.2% |
| 3ia8A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.52 | 43.0 | 3.99e-01 | 89.1% | 77.8% |
| 2n93A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.52 | 34.0 | 3.42e-01 | 76.7% | 64.6% |
| 4k35A02 | 2.70.98.30 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 | 0.51 | 39.0 | 3.37e-01 | 80.6% | 95.1% |
| 2p12A01 | 2.40.380.10 | Mainly Beta › Beta Barrel › FomD barrel-like fold › FomD-like | 0.51 | 38.0 | 3.59e-01 | 79.1% | 68.9% |
| 3qv0A00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.51 | 41.0 | 3.72e-01 | 87.6% | 65.9% |
| 2o62A01 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.50 | 39.0 | 3.89e-01 | 79.1% | 99.2% |
ECOD (40)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3281893 | 71.2.1.1 ↗ | beta meanders › Lipoprotein localization factors LolAB › PA1994-like › PA1994-like › Glycolipid_bind | 0.83 | 58.0 | 5.03e-01 | 70.5% | 53.5% |
| 3601683 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.74 | 69.0 | 5.09e-01 | 98.4% | 53.4% |
| 3489191 | 5084.5.1.3 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_3 | 0.74 | 69.0 | 5.22e-01 | 100.0% | 56.9% |
| 4515973 | 5084.5.1.32 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › LOC400499 | 0.73 | 64.0 | 4.13e-01 | 92.2% | 30.9% |
| 3932438 | 5084.5.1.33 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › DNAJC11_beta-barrel | 0.73 | 68.0 | 5.32e-01 | 99.2% | 68.6% |
| 3827592 | 5084.5.1.3 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_3 | 0.71 | 59.0 | 5.47e-01 | 86.8% | 80.4% |
| 3626881 | 5084.5.1.33 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › DNAJC11_beta-barrel | 0.69 | 63.0 | 4.79e-01 | 98.4% | 55.9% |
| 3598820 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.68 | 64.0 | 4.86e-01 | 99.2% | 57.1% |
| 3981844 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.68 | 62.0 | 4.24e-01 | 100.0% | 55.6% |
| 3667729 | 5084.5.1.3 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_3 | 0.68 | 63.0 | 4.81e-01 | 99.2% | 61.1% |
| 3365689 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.68 | 64.0 | 4.56e-01 | 99.2% | 57.3% |
| 3932463 | 5084.5.1.3 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_3 | 0.67 | 63.0 | 4.74e-01 | 99.2% | 60.4% |
| 3609718 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.67 | 61.0 | 4.69e-01 | 99.2% | 54.8% |
| 3935761 | 5084.5.1.3 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_3 | 0.67 | 62.0 | 4.69e-01 | 99.2% | 55.8% |
| 3581297 | 5084.5.1.3 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_3 | 0.66 | 62.0 | 5.07e-01 | 98.4% | 76.3% |
| 4086880 | 9.1.1.14 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › CpeS | 0.64 | 42.0 | 3.97e-01 | 83.7% | 57.0% |
| 3708591 | 77.2.1.1 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN | 0.63 | 56.0 | 4.49e-01 | 96.1% | 51.2% |
| 3356246 | 5084.5.1.45 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › PF28482 | 0.63 | 56.0 | 4.76e-01 | 97.7% | 63.1% |
| 3719688 | 77.3.1.3 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › MORN | 0.63 | 56.0 | 4.48e-01 | 96.9% | 50.6% |
| 4055106 | 71.1.1.2 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA | 0.61 | 40.0 | 3.51e-01 | 94.6% | 44.9% |
| 4248683 | 9.1.1.14 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › CpeS | 0.61 | 44.0 | 3.84e-01 | 72.9% | 60.5% |
| 4177915 | 9.1.1.14 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › CpeS | 0.61 | 43.0 | 3.92e-01 | 72.1% | 65.3% |
| 4294796 | 9.1.1.14 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › CpeS | 0.58 | 41.0 | 3.80e-01 | 74.4% | 75.9% |
| 3506427 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.57 | 43.0 | 4.41e-01 | 77.5% | 100.0% |
| 3690503 | 241.2.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like | 0.57 | 41.0 | 4.44e-01 | 77.5% | 86.2% |
| 3894207 | 3369.1.1.1 ↗ | beta meanders › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › Lamp2-like_luminal | 0.57 | 45.0 | 4.23e-01 | 81.4% | 97.4% |
| 3456597 | 897.1.1.1 ↗ | a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 › MAM33 | 0.56 | 43.0 | 3.94e-01 | 89.1% | 61.9% |
| 4310253 | 9.1.1.14 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › CpeS | 0.54 | 41.0 | 3.78e-01 | 79.1% | 100.0% |
| 3263006 | 844.1.1.2 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR | 0.54 | 39.0 | 3.70e-01 | 81.4% | 61.9% |
| 5038572 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.53 | 40.0 | 3.79e-01 | 82.9% | 66.7% |
| 3655876 | 5.1.4.298 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_ELP1_1st, Beta-prop_ELP1_2nd | 0.53 | 46.0 | 2.95e-01 | 98.4% | 68.8% |
| 4362579 | 9.1.1.14 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › CpeS | 0.52 | 42.0 | 3.81e-01 | 85.3% | 66.3% |
| 3964888 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.52 | 40.0 | 3.39e-01 | 79.8% | 74.8% |
| 3839765 | 12.3.1.24 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › YidC_periplas | 0.52 | 40.0 | 3.21e-01 | 82.9% | 95.9% |
| 3738128 | 844.1.1.4 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Scramblase | 0.52 | 46.0 | 4.05e-01 | 98.4% | 74.7% |
| 4995046 | 12.3.1.15 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › AmyA-gluTrfs_C | 0.52 | 41.0 | 3.23e-01 | 86.8% | 99.7% |
| 3360888 | 5.1.4.298 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_ELP1_1st, Beta-prop_ELP1_2nd | 0.51 | 45.0 | 3.08e-01 | 98.4% | 58.0% |
| 4596124 | 9.1.1.14 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › CpeS | 0.51 | 42.0 | 3.84e-01 | 86.0% | 75.2% |
| 2717534 | 12.3.1.31 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › YgjK_N | 0.51 | 40.0 | 3.09e-01 | 81.4% | 86.4% |
| 4136961 | 9.1.1.14 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › CpeS | 0.50 | 43.0 | 3.89e-01 | 97.7% | 68.0% |
D2
medium
residues 130-204