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hypothetical_protein_GMAR_ORF124

Euk-Vir

Golden_Marseillevirus

hypothetical_protein_GMAR_ORF124__YP_009310241__Golden_Marseillevirus__1720526

Identity

Accession:
YP_009310241 ↗
Protein ID:
hypothetical_protein_GMAR_ORF124
Kingdom:
euk

Quality

68.3 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Marseilleviridae› Marseillevirus› Golden_Marseillevirus

TaxID: 1720526

Cluster

View cluster (23 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 44-129
PDB
Domain cluster: rep: MF418016.1__AWD93005.1__HSE3_gp053__00053__D71-138
CATH (25)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2lwyA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.84 78.0 6.48e-01 98.8% 62.3%
4e2tB00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.83 75.0 5.94e-01 98.8% 56.8%
4o1sA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.81 75.0 5.89e-01 100.0% 55.9%
6vgwA01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.79 71.0 5.93e-01 100.0% 58.9%
5o9iA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.79 71.0 5.60e-01 98.8% 57.3%
1at0A00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.79 72.0 5.99e-01 100.0% 63.4%
1zdeA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.78 72.0 5.76e-01 100.0% 61.3%
2cw8A01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.78 70.0 5.57e-01 98.8% 55.6%
6zgqA01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.73 64.0 5.36e-01 97.7% 67.3%
2jqjA01 2.60.200.20 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.64 44.0 3.84e-01 70.9% 83.8%
1x5aA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 35.0 3.43e-01 72.1% 49.5%
4il7A00 2.60.120.1300 Mainly Beta › Sandwich › Jelly Rolls › 0.62 36.0 3.65e-01 96.5% 58.8%
1xf1A05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 38.0 3.66e-01 73.3% 54.5%
2v5yA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 34.0 3.25e-01 73.3% 50.0%
4lx3A00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.56 46.0 4.44e-01 91.9% 98.0%
5e6tA02 2.40.30.120 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses 0.53 33.0 3.25e-01 73.3% 56.4%
5e55B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 33.0 3.27e-01 73.3% 57.0%
2dliA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 33.0 3.23e-01 74.4% 55.1%
5e53A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 33.0 3.22e-01 73.3% 57.0%
4z48A00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.52 38.0 2.86e-01 79.1% 90.0%
1e25A00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.52 37.0 2.67e-01 75.6% 73.7%
4n0rA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 34.0 3.47e-01 94.2% 69.4%
4h75A00 2.80.10.70 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › Spindlin/Ssty 0.51 44.0 3.39e-01 97.7% 93.5%
4d0qA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.50 31.0 2.58e-01 72.1% 32.9%
1r0uA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.50 34.0 2.95e-01 70.9% 88.7%
ECOD (61)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3963364 69.1.1.3 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › PT-HINT 0.86 81.0 6.65e-01 100.0% 64.8%
4565870 69.1.1.0 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.84 78.0 6.31e-01 100.0% 61.3%
259963 69.1.1.3 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › PT-HINT 0.84 78.0 6.48e-01 98.8% 62.3%
3257888 69.1.1.4 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.83 77.0 6.27e-01 100.0% 66.7%
4975578 69.1.1.0 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.83 77.0 5.25e-01 100.0% 32.4%
5030213 69.1.1.4 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.83 76.0 6.25e-01 100.0% 60.7%
4039971 69.1.1.4 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.83 76.0 5.92e-01 100.0% 57.1%
4971400 69.1.1.0 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.82 77.0 5.14e-01 100.0% 30.2%
2524072 69.1.1.4 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.82 75.0 5.90e-01 98.8% 55.3%
5024341 69.1.1.4 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.82 76.0 5.81e-01 100.0% 62.2%
4993927 69.1.1.4 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.82 75.0 6.10e-01 97.7% 71.3%
4940451 69.1.1.4 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.82 74.0 6.24e-01 96.5% 63.0%
4872043 69.1.1.0 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.82 76.0 6.18e-01 100.0% 59.3%
5002632 69.1.1.0 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.82 74.0 6.08e-01 97.7% 58.4%
4457379 69.1.1.0 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.82 73.0 6.06e-01 100.0% 57.2%
4978263 69.1.1.0 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.82 76.0 5.99e-01 100.0% 55.2%
5028312 69.1.1.4 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.82 74.0 6.19e-01 100.0% 60.0%
5032319 69.1.1.0 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.82 75.0 6.11e-01 98.8% 64.0%
4993732 69.1.1.0 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.81 69.0 6.02e-01 100.0% 62.4%
4983616 69.1.1.0 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.81 75.0 5.90e-01 100.0% 60.6%
4983458 69.1.1.0 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.81 73.0 5.83e-01 97.7% 54.5%
4994372 69.1.1.0 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.81 68.0 6.09e-01 96.5% 65.0%
4979631 69.1.1.0 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.81 73.0 6.00e-01 100.0% 56.0%
5013038 69.1.1.0 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.81 72.0 5.80e-01 97.7% 51.9%
5065032 69.1.1.4 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.81 75.0 5.94e-01 100.0% 68.5%
3604113 69.1.1.4 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.81 74.0 6.16e-01 100.0% 61.4%
5029540 69.1.1.4 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.81 73.0 5.83e-01 97.7% 55.0%
5028788 69.1.1.0 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.80 74.0 6.16e-01 100.0% 63.6%
4948019 69.1.1.17 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › MCM 0.79 73.0 5.68e-01 100.0% 58.3%
4054994 69.1.1.0 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.79 73.0 5.73e-01 100.0% 53.5%
2636473 69.1.1.0 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.79 71.0 5.87e-01 100.0% 57.2%
4070999 69.1.1.1 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.79 73.0 5.90e-01 100.0% 59.4%
4600944 69.1.1.0 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.79 72.0 5.65e-01 100.0% 52.6%
4487998 69.1.1.1 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.79 72.0 5.65e-01 100.0% 52.6%
3495262 69.1.1.1 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.79 73.0 5.60e-01 100.0% 60.6%
4274856 69.1.1.0 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.79 70.0 5.60e-01 97.7% 71.5%
3877825 69.1.1.1 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.78 72.0 5.31e-01 100.0% 46.7%
3861422 69.1.1.1 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.78 71.0 5.44e-01 100.0% 49.5%
3230518 69.1.1.1 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.78 71.0 5.76e-01 100.0% 64.5%
4243055 69.1.1.1 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.77 70.0 5.34e-01 100.0% 47.7%
4997604 69.1.1.0 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.77 71.0 5.58e-01 100.0% 51.8%
4998394 69.1.1.0 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.77 67.0 5.44e-01 94.2% 65.8%
3174953 69.1.1.2 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hom_end_hint 0.76 58.0 4.16e-01 79.1% 97.8%
3678850 4.1.1.302 ↗ beta barrels › SH3 › SH3 › SH3 › tSH3-B_UBE2O 0.70 48.0 4.08e-01 70.9% 63.7%
5062488 73.1.1.1 ↗ beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › FHA 0.68 47.0 4.12e-01 73.3% 98.5%
4995671 3115.1.1.12 ↗ a+b two layers › GP2-like › RplX-like › RplX-like › PF30567 0.67 39.0 4.97e-01 73.3% 100.0%
3602168 69.1.1.0 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.64 48.0 3.94e-01 79.1% 96.1%
135452 73.1.1.1 ↗ beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › FHA 0.63 43.0 4.09e-01 70.9% 100.0%
199093 73.1.1.1 ↗ beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › FHA 0.63 44.0 3.73e-01 72.1% 78.0%
3683353 4004.1.1.5 ↗ beta sandwiches › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › DAGK_acc 0.62 44.0 3.76e-01 74.4% 97.2%
5061425 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 35.0 3.69e-01 72.1% 69.3%
4962193 302.4.1.1 ↗ a+b two layers › Reverse ferredoxin › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › Hydant_A_C 0.56 39.0 3.62e-01 72.1% 58.1%
4033347 11.24.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › N-terminal Ig-like domain in baseplate protein ORF48 › N-terminal Ig-like domain in baseplate protein ORF48 › BppU_N 0.56 35.0 3.10e-01 72.1% 42.3%
4988712 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 34.0 3.29e-01 73.3% 53.0%
3521189 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 33.0 3.11e-01 72.1% 47.6%
4059006 9.9.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Hypothetical protein YwiB › Hypothetical protein YwiB 0.54 37.0 3.31e-01 70.9% 99.2%
3989353 9.9.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Hypothetical protein YwiB › Hypothetical protein YwiB › DUF1934 0.53 36.0 3.24e-01 70.9% 99.2%
3885308 11.1.1.96 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set 0.52 34.0 3.08e-01 72.1% 48.3%
4961940 4.15.1.2 ↗ beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like › PF31112 0.52 36.0 3.42e-01 73.3% 74.3%
5062627 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.51 30.0 3.02e-01 74.4% 57.6%
3410856 11.2.1.38 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › Bfc 0.51 36.0 3.06e-01 75.6% 100.0%