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hypothetical_protein_GMAR_ORF148
Euk-VirGolden_Marseillevirus
hypothetical_protein_GMAR_ORF148__YP_009310265__Golden_Marseillevirus__1720526
Identity
- Accession:
- YP_009310265 ↗
- Protein ID:
- hypothetical_protein_GMAR_ORF148
- Kingdom:
- euk
Quality
77.7
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Pimascovirales›
Marseilleviridae›
Marseillevirus›
Golden_Marseillevirus
TaxID: 1720526
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-103
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4wz0A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.64 | 42.0 | 3.99e-01 | 84.8% | 56.0% |
| 2csyA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.64 | 36.0 | 4.23e-01 | 71.7% | 83.3% |
| 5dinA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.63 | 41.0 | 3.76e-01 | 83.7% | 50.0% |
| 1rmdA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.60 | 41.0 | 4.26e-01 | 82.6% | 75.6% |
| 2bayE00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.60 | 37.0 | 4.26e-01 | 77.2% | 94.9% |
| 1wgmA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.60 | 38.0 | 4.13e-01 | 81.5% | 79.5% |
| 8eb0A01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.59 | 40.0 | 4.19e-01 | 72.8% | 76.7% |
| 2y43A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.58 | 43.0 | 4.37e-01 | 88.0% | 80.7% |
| 5feyA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.57 | 38.0 | 4.02e-01 | 77.2% | 79.5% |
| 3ng2B00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.57 | 36.0 | 4.04e-01 | 71.7% | 88.1% |
| 2dloA00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.55 | 31.0 | 3.25e-01 | 73.9% | 60.5% |
| 2ma6A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.55 | 33.0 | 3.76e-01 | 79.3% | 88.5% |
| 3l11A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.52 | 39.0 | 3.84e-01 | 81.5% | 81.7% |
| 5dkaA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.52 | 37.0 | 3.73e-01 | 76.1% | 84.4% |
| 2csvA00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.52 | 30.0 | 3.22e-01 | 90.2% | 68.1% |
ECOD (52)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3825395 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.66 | 41.0 | 4.53e-01 | 72.8% | 81.4% |
| 3791889 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.65 | 41.0 | 4.38e-01 | 77.2% | 73.8% |
| 3913667 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.63 | 41.0 | 3.66e-01 | 83.7% | 46.2% |
| 3550923 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.63 | 41.0 | 3.65e-01 | 81.5% | 45.2% |
| 3276176 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.63 | 38.0 | 4.47e-01 | 79.3% | 93.3% |
| 3596561 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.62 | 40.0 | 4.42e-01 | 75.0% | 84.3% |
| 5071881 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.62 | 39.0 | 4.54e-01 | 70.7% | 96.7% |
| 3410722 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.62 | 39.0 | 4.61e-01 | 73.9% | 98.3% |
| 3258447 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.62 | 44.0 | 4.62e-01 | 92.4% | 83.7% |
| 3723227 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.62 | 41.0 | 4.40e-01 | 72.8% | 78.8% |
| 3483271 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.62 | 39.0 | 4.47e-01 | 79.3% | 90.8% |
| 3713248 | 376.1.1.8 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › U-box | 0.62 | 41.0 | 4.30e-01 | 81.5% | 74.1% |
| 3414566 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.61 | 42.0 | 4.20e-01 | 70.7% | 73.7% |
| 3799098 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.61 | 42.0 | 4.11e-01 | 83.7% | 63.8% |
| 3254552 | 376.1.1.31 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_5 | 0.61 | 41.0 | 4.52e-01 | 72.8% | 90.0% |
| 3498992 | 904.1.1.0 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain | 0.61 | 42.0 | 3.72e-01 | 71.7% | 82.2% |
| 3347073 | 376.1.1.8 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › U-box | 0.61 | 40.0 | 3.94e-01 | 85.9% | 62.0% |
| 3729830 | 376.1.1.8 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › U-box | 0.60 | 39.0 | 4.21e-01 | 83.7% | 80.0% |
| 3246456 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.60 | 38.0 | 4.22e-01 | 71.7% | 82.9% |
| 3724405 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.60 | 41.0 | 4.37e-01 | 72.8% | 81.2% |
| 3273468 | 904.1.1.0 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain | 0.60 | 42.0 | 3.76e-01 | 72.8% | 83.7% |
| 4977742 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.60 | 46.0 | 4.75e-01 | 96.7% | 89.4% |
| 3331318 | 376.1.1.40 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_11 | 0.60 | 38.0 | 4.40e-01 | 89.1% | 92.3% |
| 3621780 | 376.1.1.27 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 | 0.60 | 38.0 | 4.08e-01 | 92.4% | 75.0% |
| 3249848 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.60 | 42.0 | 4.35e-01 | 73.9% | 82.4% |
| 3874218 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.59 | 37.0 | 4.08e-01 | 72.8% | 81.4% |
| 3478408 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.59 | 38.0 | 3.98e-01 | 76.1% | 72.5% |
| 3266881 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.59 | 44.0 | 4.57e-01 | 92.4% | 85.9% |
| 3573660 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.59 | 42.0 | 4.39e-01 | 94.6% | 81.2% |
| 3716109 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.59 | 39.0 | 3.88e-01 | 88.0% | 63.0% |
| 3730169 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.58 | 40.0 | 3.97e-01 | 83.7% | 68.4% |
| 3502902 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.58 | 40.0 | 3.92e-01 | 71.7% | 73.0% |
| 3398581 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.56 | 41.0 | 4.16e-01 | 84.8% | 78.9% |
| 3410252 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.56 | 38.0 | 4.24e-01 | 77.2% | 92.9% |
| 3724440 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.56 | 40.0 | 4.09e-01 | 75.0% | 77.8% |
| 3667602 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.56 | 40.0 | 4.49e-01 | 77.2% | 100.0% |
| 3855533 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.56 | 40.0 | 4.25e-01 | 82.6% | 87.5% |
| 3320867 | 376.1.1.105 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › PF25998 | 0.56 | 39.0 | 3.94e-01 | 71.7% | 91.1% |
| 3267109 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.55 | 37.0 | 4.15e-01 | 71.7% | 96.9% |
| 3203296 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.55 | 36.0 | 3.89e-01 | 96.7% | 81.3% |
| 3219112 | 192.8.1.443 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › zf-RING_UBOX | 0.55 | 42.0 | 3.34e-01 | 96.7% | 36.7% |
| 3721914 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.55 | 40.0 | 3.85e-01 | 76.1% | 71.4% |
| 3566406 | 376.1.1.27 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 | 0.55 | 40.0 | 4.04e-01 | 83.7% | 75.8% |
| 3891887 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.53 | 40.0 | 4.14e-01 | 80.4% | 96.5% |
| 4398485 | 821.1.1.1 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG | 0.53 | 37.0 | 2.82e-01 | 73.9% | 37.1% |
| 3911089 | 376.1.1.29 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_4 | 0.52 | 39.0 | 4.02e-01 | 79.3% | 96.5% |
| 5009328 | 150.1.1.207 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › DUF2175 | 0.52 | 33.0 | 3.24e-01 | 78.3% | 56.2% |
| 3369091 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.52 | 42.0 | 3.94e-01 | 88.0% | 81.7% |
| 3748776 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.52 | 39.0 | 4.13e-01 | 80.4% | 97.5% |
| 4021100 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.52 | 42.0 | 3.85e-01 | 92.4% | 73.1% |
| 3697206 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.51 | 43.0 | 3.82e-01 | 95.7% | 66.4% |
| 3253098 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.51 | 37.0 | 3.76e-01 | 97.8% | 77.9% |
D2
high
residues 136-394