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hypothetical_protein_GMAR_ORF214

Euk-Vir

Golden_Marseillevirus

hypothetical_protein_GMAR_ORF214__YP_009310331__Golden_Marseillevirus__1720526

Identity

Accession:
YP_009310331 ↗
Protein ID:
hypothetical_protein_GMAR_ORF214
Kingdom:
euk

Quality

76.3 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Marseilleviridae› Marseillevirus› Golden_Marseillevirus

TaxID: 1720526

Cluster

View cluster (19 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 45-125
PDB
Domain cluster: representative
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2pmrA00 1.20.1270.90 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like 0.71 42.0 4.34e-01 97.5% 63.2%
3rguB00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.65 40.0 3.96e-01 97.5% 58.6%
1cqxA01 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.63 49.0 4.00e-01 98.8% 45.3%
4nqfA00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.63 51.0 4.24e-01 88.9% 89.7%
3cqxC00 1.20.58.890 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.62 45.0 4.56e-01 95.1% 76.5%
3h9pA00 1.10.4200.10 Mainly Alpha › Orthogonal Bundle › Triphosphoribosyl-dephospho-CoA protein › Triphosphoribosyl-dephospho-CoA protein 0.58 48.0 3.54e-01 92.6% 43.4%
3ofnY00 1.10.287.80 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain 0.57 43.0 3.84e-01 93.8% 57.4%
4uw9A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.56 46.0 4.60e-01 90.1% 85.5%
3d2eA06 1.20.1270.10 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.55 39.0 3.53e-01 74.1% 68.1%
2nnwA02 1.10.287.4070 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.55 44.0 3.84e-01 98.8% 57.5%
3rkoG00 1.10.287.3510 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.54 41.0 3.80e-01 91.4% 65.0%
3vbbE01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.53 43.0 3.78e-01 96.3% 60.5%
2bk9A00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.51 42.0 3.41e-01 88.9% 47.7%
2q0oC00 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.51 39.0 3.87e-01 96.3% 75.6%
3p4tA01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.51 40.0 3.55e-01 86.4% 70.6%
3icxA01 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.51 42.0 4.33e-01 96.3% 96.0%
ECOD (15)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3298752 150.5.1.0 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like 0.77 41.0 3.64e-01 84.0% 37.4%
3186805 3922.1.1.0 ↗ alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.70 44.0 4.68e-01 97.5% 72.9%
3774773 3252.2.1.1 ↗ alpha arrays › SHQ1 C-terminal domain-like › Anaphase-promoting complex subunit 5 N-terminal domain › Anaphase-promoting complex subunit 5 N-terminal domain › Apc5_N 0.69 62.0 4.64e-01 100.0% 52.8%
3248081 601.7.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain 0.68 56.0 4.89e-01 88.9% 95.0%
3998827 1128.1.1.1 ↗ alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR 0.67 40.0 3.98e-01 88.9% 56.5%
4988447 192.29.1.0 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.65 42.0 3.76e-01 97.5% 47.0%
3767 601.26.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › YppE-like › YppE-like › DUF1798 0.62 51.0 4.43e-01 88.9% 94.3%
5043822 5060.2.1.1 ↗ alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › T2SSF 0.61 51.0 4.42e-01 95.1% 79.2%
3539251 633.24.1.4 ↗ alpha bundles › Bromodomain-like › RABEX-5 helical domain › RABEX-5 helical domain › RIN1 0.59 39.0 3.56e-01 87.7% 52.4%
3946944 7523.1.1.0 ↗ a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II 0.58 48.0 3.70e-01 93.8% 89.0%
363971 101.1.4.1 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › Pou 0.56 39.0 3.86e-01 71.6% 86.0%
3731383 192.7.1.0 ↗ alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm 0.54 39.0 3.60e-01 93.8% 61.0%
3626374 150.5.1.0 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like 0.52 41.0 3.97e-01 96.3% 75.6%
3589400 192.5.1.4 ↗ alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › DUF1140 0.52 40.0 3.78e-01 96.3% 67.0%
3681170 102.1.1.146 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › Nop 0.52 40.0 4.10e-01 98.8% 88.7%