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hypothetical_protein_GMAR_ORF247
Euk-VirGolden_Marseillevirus
hypothetical_protein_GMAR_ORF247__YP_009310364__Golden_Marseillevirus__1720526
Identity
- Accession:
- YP_009310364 ↗
- Protein ID:
- hypothetical_protein_GMAR_ORF247
- Kingdom:
- euk
Quality
75.5
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Pimascovirales›
Marseilleviridae›
Marseillevirus›
Golden_Marseillevirus
TaxID: 1720526
Cluster
View cluster (7 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 14-87
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5gxuB02 | 1.20.990.10 | Mainly Alpha › Up-down Bundle › NADPH-cytochrome p450 Reductase; Chain A, domain 3 › NADPH-cytochrome p450 Reductase; Chain A, domain 3 | 0.67 | 44.0 | 3.78e-01 | 95.9% | 42.4% |
| 4anjA06 | 1.20.5.4820 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.57 | 50.0 | 4.41e-01 | 100.0% | 72.6% |
| 3qxyA02 | 3.90.1420.10 | Alpha Beta › Alpha-Beta Complex › set domain protein methyltransferase, domain 2 › Rubisco LSMT, substrate-binding domain | 0.56 | 40.0 | 3.17e-01 | 78.4% | 90.4% |
| 1xp8A02 | 3.30.250.10 | Alpha Beta › 2-Layer Sandwich › Rec A Protein; domain 2 › RecA protein, C-terminal domain | 0.55 | 36.0 | 3.90e-01 | 83.8% | 85.0% |
| 1k32A03 | 3.30.750.44 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › | 0.54 | 39.0 | 4.03e-01 | 97.3% | 79.2% |
| 1qoyA00 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.54 | 46.0 | 3.09e-01 | 94.6% | 38.9% |
| 2ihyA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 39.0 | 2.74e-01 | 77.0% | 61.7% |
| 5jrjA02 | 3.30.250.10 | Alpha Beta › 2-Layer Sandwich › Rec A Protein; domain 2 › RecA protein, C-terminal domain | 0.54 | 37.0 | 3.93e-01 | 95.9% | 89.8% |
| 4lqxA00 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.53 | 45.0 | 3.11e-01 | 100.0% | 43.6% |
| 3lk7A02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.53 | 45.0 | 3.37e-01 | 97.3% | 87.4% |
| 4mhcA01 | 1.20.58.1780 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 46.0 | 3.25e-01 | 100.0% | 48.6% |
| 2zgyA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.52 | 38.0 | 3.09e-01 | 77.0% | 66.4% |
| 2mn4A00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.51 | 35.0 | 3.35e-01 | 89.2% | 58.5% |
| 4nt1A00 | 1.10.3520.10 | Mainly Alpha › Orthogonal Bundle › Glycolipid transfer protein, GLTP › Glycolipid transfer protein | 0.51 | 42.0 | 3.22e-01 | 100.0% | 82.5% |
| 1f0jA00 | 1.10.1300.10 | Mainly Alpha › Orthogonal Bundle › Catalytic domain of cyclic nucleotide phosphodiesterase 4b2b › 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain | 0.50 | 42.0 | 2.82e-01 | 100.0% | 34.5% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3421663 | 502.1.1.1 ↗ | a+b two layers › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › RecA_C | 0.60 | 39.0 | 4.02e-01 | 85.1% | 70.0% |
| 3696285 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.58 | 49.0 | 3.45e-01 | 100.0% | 30.2% |
| 5042355 | 243.6.1.0 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain | 0.58 | 49.0 | 4.72e-01 | 97.3% | 96.5% |
| 3219027 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.58 | 42.0 | 3.08e-01 | 78.4% | 51.6% |
| 3250581 | 3409.1.1.1 ↗ | a+b duplicates or obligate multimers › Vacuolar protein sorting-associated protein 30 BARA domain › Vacuolar protein sorting-associated protein 30 BARA domain › Vacuolar protein sorting-associated protein 30 BARA domain › APG6 | 0.58 | 46.0 | 3.11e-01 | 90.5% | 47.5% |
| 3222232 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.58 | 42.0 | 3.08e-01 | 78.4% | 54.4% |
| 3511926 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.57 | 42.0 | 3.02e-01 | 78.4% | 49.5% |
| 4258207 | 502.1.1.1 ↗ | a+b two layers › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › RecA_C | 0.57 | 36.0 | 4.02e-01 | 91.9% | 87.3% |
| 3799246 | 3409.1.1.1 ↗ | a+b duplicates or obligate multimers › Vacuolar protein sorting-associated protein 30 BARA domain › Vacuolar protein sorting-associated protein 30 BARA domain › Vacuolar protein sorting-associated protein 30 BARA domain › APG6 | 0.57 | 45.0 | 3.47e-01 | 90.5% | 76.8% |
| 3208974 | 3687.1.1.1 ↗ | alpha bundles › NADPH-cytochrome p450 reductase helical insertion domain › NADPH-cytochrome p450 reductase helical insertion domain › NADPH-cytochrome p450 reductase helical insertion domain › FAD_binding_1 | 0.57 | 44.0 | 3.76e-01 | 83.8% | 52.5% |
| 3580184 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.57 | 41.0 | 2.97e-01 | 78.4% | 48.9% |
| 3791707 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.56 | 41.0 | 2.91e-01 | 78.4% | 52.9% |
| 3239956 | 3409.1.1.1 ↗ | a+b duplicates or obligate multimers › Vacuolar protein sorting-associated protein 30 BARA domain › Vacuolar protein sorting-associated protein 30 BARA domain › Vacuolar protein sorting-associated protein 30 BARA domain › APG6 | 0.56 | 45.0 | 3.17e-01 | 90.5% | 56.2% |
| 3927377 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.56 | 41.0 | 3.05e-01 | 78.4% | 56.6% |
| 3226614 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.55 | 40.0 | 3.15e-01 | 78.4% | 61.8% |
| 3363361 | 632.2.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains | 0.55 | 44.0 | 3.72e-01 | 90.5% | 97.8% |
| 5009649 | 231.1.2.7 ↗ | a+b two layers › MocoBD/DmpA-related › MocoBD/DmpA-related › DmpA/ArgJ › MoCoBD_2 | 0.55 | 40.0 | 2.40e-01 | 100.0% | 9.4% |
| 3924503 | 4967.1.1.0 ↗ | alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases | 0.55 | 42.0 | 2.95e-01 | 82.4% | 37.9% |
| 4948345 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.54 | 47.0 | 4.01e-01 | 98.6% | 92.8% |
| 3226016 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.54 | 40.0 | 2.94e-01 | 78.4% | 50.0% |
| 4939369 | 604.7.1.0 ↗ | alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A | 0.53 | 45.0 | 3.43e-01 | 93.2% | 45.9% |
| 3518530 | 5067.1.1.3 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Patched | 0.51 | 44.0 | 2.53e-01 | 97.3% | 48.0% |
| 4484289 | 633.23.1.9 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › SUR7 | 0.51 | 45.0 | 3.33e-01 | 98.6% | 71.1% |
| 3580187 | 1188.1.1.1 ↗ | alpha bundles › ZIP zinc transporter › ZIP zinc transporter › ZIP zinc transporter › Zip | 0.50 | 44.0 | 3.38e-01 | 100.0% | 61.1% |
| 3400423 | 3006.1.1.3 ↗ | a+b two layers › Sm-Like archaeal protein Smap3, C-terminal domain › Sm-Like archaeal protein Smap3, C-terminal domain › Sm-Like archaeal protein Smap3, C-terminal domain › AD | 0.50 | 34.0 | 3.41e-01 | 73.0% | 77.5% |
| 3236884 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.50 | 43.0 | 2.96e-01 | 95.9% | 67.8% |
| 3790632 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.50 | 36.0 | 2.84e-01 | 75.7% | 56.2% |
| 3395646 | 4106.1.1.1 ↗ | few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC | 0.50 | 35.0 | 2.66e-01 | 74.3% | 74.9% |
D2
high
residues 93-225