←Back to structures

hypothetical_protein_GMAR_ORF249

Euk-Vir

Golden_Marseillevirus

hypothetical_protein_GMAR_ORF249__YP_009310366__Golden_Marseillevirus__1720526

Identity

Accession:
YP_009310366 ↗
Protein ID:
hypothetical_protein_GMAR_ORF249
Kingdom:
euk

Quality

82.2 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Marseilleviridae› Marseillevirus› Golden_Marseillevirus

TaxID: 1720526

Cluster

View cluster (6 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 163-264
PDB
Domain cluster: rep: OP056089.1__UYD72102.1__X__00002__D5-102
D2 medium residues 4-52
PDB
Domain cluster: rep: IMGVR_UViG_3300021426_000003-3300021426-Ga0224482_10000072181__D164-213
D3 medium residues 63-152
PDB
Domain cluster: rep: OP056089.1__UYD72102.1__X__00002__D5-102
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13392.13 best HNH_3 25.1 1.40e-05 51.1% 97.8%
D4 medium residues 272-323
PDB
Domain cluster: rep: OP172807.1__WAX16177.1__EH802P2_00072__00071__D76-121
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2f68X02 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 45.0 3.28e-01 98.1% 34.6%
2iw3A03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 41.0 2.78e-01 92.3% 39.3%
4kqdB00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.51 41.0 3.34e-01 98.1% 83.6%
1cboA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.50 40.0 2.57e-01 98.1% 94.6%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4414927 101.1.14.3 ↗ alpha arrays › HTH › HTH › DNA-binding domain of intron-encoded endonucleases › NUMOD1 0.85 77.0 6.95e-01 100.0% 75.4%
4519945 101.1.14.4 ↗ alpha arrays › HTH › HTH › DNA-binding domain of intron-encoded endonucleases › PF31232 0.83 72.0 7.11e-01 96.2% 100.0%
3058113 101.1.14.0 ↗ alpha arrays › HTH › HTH › DNA-binding domain of intron-encoded endonucleases 0.82 67.0 6.77e-01 98.1% 90.4%
3171408 101.1.14.3 ↗ alpha arrays › HTH › HTH › DNA-binding domain of intron-encoded endonucleases › NUMOD1 0.81 70.0 7.12e-01 96.2% 100.0%
D5 medium residues 373-437
PDB
Domain cluster: rep: OP172756.1__WAX11484.1__CB473P2_00064__00064__D2-63
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13392.13 best HNH_3 36.7 3.50e-09 70.8% 93.5%