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hypothetical_protein_GMAR_ORF279
Euk-VirGolden_Marseillevirus
hypothetical_protein_GMAR_ORF279__YP_009310396__Golden_Marseillevirus__1720526
Identity
- Accession:
- YP_009310396 ↗
- Protein ID:
- hypothetical_protein_GMAR_ORF279
- Kingdom:
- euk
Quality
64.3
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Pimascovirales›
Marseilleviridae›
Marseillevirus›
Golden_Marseillevirus
TaxID: 1720526
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 46-139
Domain cluster:
representative
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1nqfA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.85 | 80.0 | 5.02e-01 | 100.0% | 28.3% |
| 1kmoA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.81 | 74.0 | 4.57e-01 | 100.0% | 33.7% |
| 3jtyB01 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.79 | 72.0 | 4.71e-01 | 100.0% | 39.6% |
| 2zxkA00 | 3.40.1500.20 | Alpha Beta › 3-Layer(aba) Sandwich › oxygen-dependent coproporphyrinogen oxidase › | 0.78 | 69.0 | 4.92e-01 | 95.7% | 54.5% |
| 1a0sP00 | 2.40.170.10 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › Porin, LamB type | 0.77 | 69.0 | 4.50e-01 | 100.0% | 42.1% |
| 4frxA01 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.76 | 70.0 | 4.54e-01 | 100.0% | 48.0% |
| 1zhxA03 | 2.40.160.120 | Mainly Beta › Beta Barrel › Porin › | 0.74 | 66.0 | 5.23e-01 | 100.0% | 64.4% |
| 2porA00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.72 | 65.0 | 4.56e-01 | 100.0% | 43.2% |
| 1fw3A00 | 2.40.230.10 | Mainly Beta › Beta Barrel › Outer membrane phospholipase (ompla); Chain C › Phospholipase A1 | 0.70 | 63.0 | 4.56e-01 | 97.9% | 63.6% |
| 4fqeA00 | 2.40.160.40 | Mainly Beta › Beta Barrel › Porin › monomeric porin ompg | 0.65 | 58.0 | 4.82e-01 | 100.0% | 62.4% |
| 3vsmA02 | 2.70.98.100 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Baculovirus E66 occlusion-derived virus envelope protein, domain 2 | 0.65 | 51.0 | 4.09e-01 | 85.1% | 74.5% |
| 2i44B00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.65 | 53.0 | 3.63e-01 | 88.3% | 78.2% |
| 2q03A00 | 2.40.350.10 | Mainly Beta › Beta Barrel › AOC barrel-like › SO1590-like | 0.63 | 50.0 | 4.44e-01 | 84.0% | 77.4% |
| 1rwhA02 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.62 | 53.0 | 3.89e-01 | 95.7% | 88.2% |
| 3obaA05 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.61 | 49.0 | 3.49e-01 | 87.2% | 96.2% |
| 3ia8A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.59 | 53.0 | 4.43e-01 | 100.0% | 74.1% |
| 7r2xA02 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.58 | 49.0 | 3.68e-01 | 95.7% | 90.7% |
| 1p4tA00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.58 | 50.0 | 4.28e-01 | 95.7% | 84.5% |
| 2imjD01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 41.0 | 3.57e-01 | 73.4% | 81.0% |
| 4ybvA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.57 | 41.0 | 3.74e-01 | 73.4% | 91.7% |
| 3blcA00 | 2.70.98.90 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.57 | 49.0 | 3.54e-01 | 95.7% | 65.4% |
| 7x7zA01 | 2.40.480.10 | Mainly Beta › Beta Barrel › AOC barrel-like › Allene oxide cyclase-like | 0.57 | 48.0 | 4.23e-01 | 92.6% | 76.3% |
| 3qszA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.57 | 46.0 | 3.74e-01 | 87.2% | 57.6% |
| 6gh3A01 | 2.70.98.40 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain | 0.56 | 49.0 | 3.39e-01 | 95.7% | 61.1% |
| 2ervA00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.56 | 49.0 | 4.22e-01 | 97.9% | 90.7% |
| 3p9vA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.55 | 45.0 | 3.76e-01 | 86.2% | 78.5% |
| 5da9A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 47.0 | 3.20e-01 | 93.6% | 34.9% |
| 3hduA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.55 | 43.0 | 3.71e-01 | 84.0% | 96.1% |
| 1ar0A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 39.0 | 3.54e-01 | 74.5% | 96.0% |
| 3jv1A00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.54 | 47.0 | 3.82e-01 | 96.8% | 57.1% |
| 3h4zB03 | 3.15.10.50 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › | 0.53 | 42.0 | 3.42e-01 | 87.2% | 94.8% |
| 1aqbA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.53 | 41.0 | 3.39e-01 | 84.0% | 46.3% |
| 4r80A00 | 3.10.450.630 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 37.0 | 4.06e-01 | 73.4% | 97.4% |
| 2ciuA00 | 3.10.450.320 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Mitochondrial import inner membrane translocase subunit Tim21 | 0.53 | 46.0 | 4.23e-01 | 97.9% | 99.2% |
| 1tuhA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 38.0 | 3.47e-01 | 77.7% | 93.9% |
| 3gp6A00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.52 | 46.0 | 3.94e-01 | 100.0% | 79.4% |
| 7zqiA01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.52 | 42.0 | 3.45e-01 | 89.4% | 85.4% |
| 3mnmA00 | 2.60.40.1230 | Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain | 0.50 | 38.0 | 3.63e-01 | 83.0% | 67.9% |
| 5kkuD00 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.50 | 41.0 | 2.90e-01 | 88.3% | 46.5% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3490071 | 71.2.1.4 ↗ | beta meanders › Lipoprotein localization factors LolAB › PA1994-like › PA1994-like › CATIP_N | 0.81 | 75.0 | 5.51e-01 | 100.0% | 45.5% |
| 3838102 | 5084.10.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › LPS-assembly protein LptD › LPS-assembly protein LptD › LptD | 0.79 | 72.0 | 4.53e-01 | 100.0% | 43.5% |
| 3243473 | 5087.1.1.0 ↗ | beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-2 › Lipovitellin LV-2 | 0.79 | 73.0 | 5.25e-01 | 100.0% | 70.8% |
| 3932438 | 5084.5.1.33 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › DNAJC11_beta-barrel | 0.78 | 71.0 | 5.06e-01 | 97.9% | 47.1% |
| 3574877 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.77 | 71.0 | 4.87e-01 | 100.0% | 33.2% |
| 3385986 | 5084.3.1.2 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › IAT_beta | 0.77 | 70.0 | 5.42e-01 | 98.9% | 52.5% |
| 3971813 | 5084.8.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore | 0.77 | 72.0 | 4.56e-01 | 100.0% | 28.1% |
| 3273993 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.77 | 71.0 | 5.10e-01 | 100.0% | 43.5% |
| 4144216 | 5084.5.1.63 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Coleoptericin | 0.77 | 71.0 | 4.93e-01 | 100.0% | 35.3% |
| 3608121 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.75 | 69.0 | 4.91e-01 | 100.0% | 40.2% |
| 3404731 | 5084.5.1.37 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Attacin_N, Attacin_C | 0.74 | 67.0 | 5.40e-01 | 100.0% | 65.0% |
| 3626881 | 5084.5.1.33 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › DNAJC11_beta-barrel | 0.74 | 67.0 | 4.68e-01 | 100.0% | 35.9% |
| 3968293 | 71.2.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › PA1994-like › PA1994-like › DUF3108 | 0.72 | 65.0 | 4.97e-01 | 100.0% | 45.7% |
| 4528714 | 5084.5.4.9 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › UPF0164 | 0.71 | 65.0 | 4.34e-01 | 100.0% | 60.8% |
| 1933307 | 9.13.1.5 ↗ | beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › AOC_like | 0.70 | 55.0 | 5.04e-01 | 84.0% | 77.2% |
| 3516317 | 1100.1.1.1 ↗ | beta meanders › TIP41-like protein › TIP41-like protein › TIP41-like protein › TIP41 | 0.70 | 62.0 | 4.50e-01 | 95.7% | 79.2% |
| 3983528 | 5084.3.1.2 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › IAT_beta | 0.69 | 63.0 | 4.59e-01 | 100.0% | 52.0% |
| 1298172 | 5084.5.1.8 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › KdgM | 0.68 | 61.0 | 5.02e-01 | 100.0% | 63.2% |
| 5071127 | 12.3.1.13 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_38C | 0.68 | 51.0 | 3.52e-01 | 78.7% | 65.6% |
| 3742459 | 243.1.1.12 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TIM21 | 0.65 | 45.0 | 4.45e-01 | 71.3% | 77.0% |
| 3781112 | 3561.1.1.1 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 › Med17 | 0.65 | 52.0 | 3.25e-01 | 84.0% | 23.1% |
| 4928614 | 9.13.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like | 0.63 | 49.0 | 4.48e-01 | 84.0% | 81.2% |
| 3281686 | 331.3.1.27 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF2505 | 0.61 | 55.0 | 4.53e-01 | 100.0% | 71.5% |
| 5062234 | 331.9.1.0 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain | 0.61 | 47.0 | 4.36e-01 | 83.0% | 99.2% |
| 3959063 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.60 | 45.0 | 3.91e-01 | 79.8% | 70.7% |
| 4014757 | 9.13.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › DUF3237 | 0.60 | 54.0 | 4.81e-01 | 100.0% | 80.7% |
| 3736685 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.59 | 44.0 | 3.62e-01 | 78.7% | 75.9% |
| 3203571 | 9.13.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › DUF3237 | 0.59 | 52.0 | 4.60e-01 | 100.0% | 79.3% |
| 2773699 | 243.1.1.12 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TIM21 | 0.58 | 45.0 | 4.11e-01 | 83.0% | 96.0% |
| 4207604 | 12.3.1.3 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim | 0.58 | 48.0 | 3.19e-01 | 89.4% | 66.1% |
| 3216011 | 243.1.1.109 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF5382, DUF5382_C | 0.57 | 49.0 | 3.59e-01 | 100.0% | 86.1% |
| 3280448 | 12.3.1.3 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim | 0.57 | 48.0 | 3.44e-01 | 92.6% | 71.2% |
| 3594207 | 243.1.1.2 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 | 0.57 | 41.0 | 3.51e-01 | 74.5% | 93.1% |
| 4015830 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.56 | 48.0 | 3.13e-01 | 97.9% | 69.2% |
| 3633013 | 243.1.1.12 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TIM21 | 0.56 | 47.0 | 4.05e-01 | 90.4% | 77.2% |
| 3248518 | 243.1.1.12 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TIM21 | 0.56 | 44.0 | 4.03e-01 | 84.0% | 86.2% |
| 5044412 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.56 | 49.0 | 3.61e-01 | 95.7% | 69.0% |
| 4659430 | 12.3.1.24 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › YidC_periplas | 0.56 | 48.0 | 3.45e-01 | 95.7% | 67.4% |
| 3610630 | 71.1.1.19 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › PF25898 | 0.56 | 50.0 | 3.74e-01 | 100.0% | 96.2% |
| 3610658 | 243.1.1.2 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 | 0.55 | 39.0 | 3.30e-01 | 74.5% | 84.4% |
| 3989856 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.52 | 42.0 | 3.76e-01 | 88.3% | 69.3% |
| 3603591 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.52 | 44.0 | 3.12e-01 | 100.0% | 45.8% |
| 3166311 | 12.3.1.3 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim | 0.52 | 45.0 | 3.14e-01 | 97.9% | 91.0% |
| 3829563 | 897.1.1.0 ↗ | a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 | 0.52 | 46.0 | 3.85e-01 | 100.0% | 59.4% |
D2
medium
residues 140-202