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hypothetical_protein_GMAR_ORF282

Euk-Vir

Golden_Marseillevirus

hypothetical_protein_GMAR_ORF282__YP_009310399__Golden_Marseillevirus__1720526

Identity

Accession:: YP_009310399 ↗
Protein ID:: hypothetical_protein_GMAR_ORF282
Kingdom:: euk

Quality

71.9 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Marseilleviridae› Marseillevirus› Golden_Marseillevirus

TaxID: 1720526

Cluster

View cluster (17 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 13-190

PDB

Domain cluster: rep: putative_helicase__YP_009238527__Brazilian_marseillevirus__1813599__D17-175_881-925

D2 high residues 361-432

PDB

D3 high residues 479-621

PDB

Domain cluster: rep: MK064563__AZI75768.1__SBFV2-gp01__00001__D223-383

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02399.22 best	Herpes_ori_bp	59.0	3.70e-16	95.8%	18.1%

D4 medium residues 627-757

PDB

Domain cluster: rep: MK064563__AZI75768.1__SBFV2-gp01__00001__D223-383

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02399.22 best	Herpes_ori_bp	41.2	8.90e-11	99.2%	14.4%

D5 medium residues 758-836

PDB

Domain cluster: rep: hypothetical_protein_GMAR_ORF257__YP_009310374__Golden_Marseillevirus__1720526__D772-829

CATH (8)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4jfcA02	1.10.12.10	Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2	0.63	37.0	4.32e-01	88.6%	83.9%
1ungE00	1.10.472.10	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like	0.61	36.0	2.97e-01	82.3%	31.3%
2v6eA01	1.10.287.3180	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.58	36.0	3.74e-01	97.5%	66.7%
3e9lA02	1.20.80.40	Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › Prp8 RNase H domain, fingers region	0.57	41.0	3.90e-01	77.2%	73.7%
1x2nA01	1.10.10.60	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like	0.56	33.0	3.68e-01	73.4%	76.7%
3fxqB01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.53	44.0	4.21e-01	92.4%	87.8%
1a3qA01	2.60.40.340	Mainly Beta › Sandwich › Immunoglobulin-like › Rel homology domain (RHD), DNA-binding domain	0.51	38.0	2.94e-01	78.5%	91.1%
4hy1A02	3.30.230.10	Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 ›	0.51	40.0	3.22e-01	84.8%	84.2%

ECOD (16)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3471523	3877.1.1.0 ↗	alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC	0.68	48.0	3.29e-01	88.6%	21.5%
3557551	212.1.1.24 ↗	a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Morc6_S5	0.61	46.0	3.84e-01	78.5%	79.2%
3236856	174.1.1.50 ↗	few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › DUF7807	0.60	43.0	3.44e-01	78.5%	37.1%
3416951	5000.3.1.1 ↗	alpha arrays › Toxins' membrane translocation domains › Bcl-2 inhibitors of programmed cell death › Bcl-2 inhibitors of programmed cell death › Bcl-2	0.60	38.0	2.80e-01	79.7%	25.0%
3954048	4168.1.1.1 ↗	alpha duplicates or obligate multimers › HAMP domain › HAMP domain › HAMP domain › HAMP	0.58	32.0	3.52e-01	98.7%	66.2%
1844183	101.1.9.17 ↗	alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1	0.56	47.0	3.99e-01	92.4%	90.2%
3661482	4120.1.1.56 ↗	few secondary structure elements › Tim10/DDP › Tim10/DDP › Tim10/DDP › Myb_DNA-bind_3	0.56	41.0	4.13e-01	93.7%	80.0%
4177030	3826.1.1.81 ↗	alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › CKI	0.56	41.0	3.89e-01	100.0%	65.3%
5077504	3239.1.1.1 ↗	alpha complex topology › Cas1 › Cas1 › Cas1 › Cas_Cas1	0.55	40.0	2.63e-01	75.9%	58.5%
3226564	5054.1.1.58 ↗	alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › YVC1_C	0.54	44.0	3.00e-01	96.2%	80.3%
3497436	108.1.1.69 ↗	alpha arrays › EF-hand › EF-hand-related › EF-hand › SPEF2_C	0.53	35.0	3.45e-01	87.3%	61.9%
3240694	386.1.1.0 ↗	few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers	0.53	33.0	3.17e-01	83.5%	55.6%
5042767	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.52	38.0	3.62e-01	78.5%	91.8%
4221720	2484.1.1.1 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70	0.51	40.0	2.92e-01	88.6%	70.0%
3416265	603.1.1.104 ↗	alpha bundles › STAT-like › t-snare proteins › t-snare proteins › 7tm_7	0.50	36.0	2.35e-01	75.9%	49.7%
5079289	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.50	41.0	3.83e-01	94.9%	83.8%

D6 medium residues 837-921

PDB

Domain cluster: rep: conserved_putative_helicase__YP_009094625__Melbournevirus__1560514__D838-914

D7 medium residues 969-1072

PDB

Domain cluster: rep: hypothetical_protein_GMAR_ORF3__YP_009310120__Golden_Marseillevirus__1720526__D249-342