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hypothetical_protein_GMAR_ORF2

Euk-Vir

Golden_Marseillevirus

hypothetical_protein_GMAR_ORF2__YP_009310119__Golden_Marseillevirus__1720526

Identity

Accession:
YP_009310119 ↗
Protein ID:
hypothetical_protein_GMAR_ORF2
Kingdom:
euk

Quality

48.7 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Marseilleviridae› Marseillevirus› Golden_Marseillevirus

TaxID: 1720526

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-47
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2e31A01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.81 71.0 6.26e-01 100.0% 74.2%
1q0sA02 1.10.1020.10 Mainly Alpha › Orthogonal Bundle › Adenine-specific Methyltransferase; domain 2 › Adenine-specific Methyltransferase, Domain 2 0.67 51.0 4.11e-01 90.5% 66.3%
4kjmA02 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.59 40.0 3.75e-01 71.4% 56.4%
2y1vA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 45.0 3.06e-01 95.2% 45.4%
3hhcC00 1.20.1250.60 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › Interferon lambda 0.56 47.0 3.31e-01 100.0% 51.0%
ECOD (35)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3423604 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.93 80.0 7.54e-01 92.9% 78.0%
3420574 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.91 79.0 7.77e-01 97.6% 88.9%
3806207 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.91 73.0 7.43e-01 92.9% 92.5%
3618416 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.90 72.0 7.43e-01 92.9% 92.5%
3617100 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.89 74.0 6.32e-01 95.2% 58.5%
3678716 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.88 79.0 6.60e-01 100.0% 61.4%
3854698 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.88 78.0 4.43e-01 100.0% 10.4%
3432917 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.88 77.0 7.61e-01 100.0% 97.8%
3924100 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.87 72.0 7.13e-01 100.0% 86.7%
3817998 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.87 76.0 4.57e-01 100.0% 16.1%
3274776 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.86 77.0 5.82e-01 100.0% 46.3%
3380603 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.86 67.0 6.63e-01 88.1% 80.0%
3492973 207.1.1.85 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like 0.86 75.0 4.32e-01 100.0% 11.7%
3185324 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.85 77.0 6.11e-01 100.0% 55.0%
3415556 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.85 72.0 7.03e-01 92.9% 86.7%
3807195 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.84 72.0 6.12e-01 100.0% 58.6%
4879175 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.84 75.0 6.48e-01 100.0% 71.9%
3537637 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.84 72.0 4.31e-01 100.0% 14.4%
3927915 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.84 70.0 5.73e-01 100.0% 52.0%
3440864 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.83 68.0 6.46e-01 95.2% 78.0%
3865783 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.83 71.0 3.88e-01 100.0% 6.0%
3632792 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.83 72.0 6.84e-01 100.0% 86.0%
3879309 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.83 73.0 6.17e-01 100.0% 65.7%
3470594 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.83 68.0 6.25e-01 100.0% 70.9%
3818983 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.83 63.0 6.48e-01 90.5% 90.0%
3902012 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.83 73.0 6.13e-01 100.0% 65.7%
4245088 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.82 72.0 5.92e-01 100.0% 84.0%
3276410 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.81 70.0 5.60e-01 100.0% 51.8%
3452785 207.1.1.79 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box 0.80 69.0 4.24e-01 100.0% 16.8%
3930695 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.80 68.0 5.71e-01 100.0% 93.3%
3821814 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.80 68.0 6.73e-01 97.6% 100.0%
4073598 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.79 68.0 5.93e-01 100.0% 69.2%
3997337 2.1.1.68 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RMI1_C 0.61 42.0 3.42e-01 71.4% 35.3%
3173414 6013.1.1.1 ↗ alpha arrays › C-terminal domains of CstF-64 › C-terminal domains of CstF-64 › C-terminal domains of CstF-64 › CSTF_C 0.60 42.0 4.31e-01 90.5% 94.3%
3611807 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.52 35.0 2.66e-01 76.2% 25.4%
D2 high residues 59-210
PDB