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hypothetical_protein_GMAR_ORF86
Euk-VirGolden_Marseillevirus
hypothetical_protein_GMAR_ORF86__YP_009310203__Golden_Marseillevirus__1720526
Identity
- Accession:
- YP_009310203 ↗
- Protein ID:
- hypothetical_protein_GMAR_ORF86
- Kingdom:
- euk
Quality
70.4
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Pimascovirales›
Marseilleviridae›
Marseillevirus›
Golden_Marseillevirus
TaxID: 1720526
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-67
D2
high
residues 132-202
Domain cluster:
rep: origin_of_replication-binding_protein__YP_009345580__Noumeavirus__1955558__D365-435
D3
high
residues 248-390
Domain cluster:
rep: MK064563__AZI75768.1__SBFV2-gp01__00001__D223-383
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02399.22 best | Herpes_ori_bp | 65.1 | 5.20e-18 | 100.0% | 18.1% |
D4
high
residues 400-528_586-605
Domain cluster:
rep: MK064563__AZI75768.1__SBFV2-gp01__00001__D223-383
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02399.22 best | Herpes_ori_bp | 36.7 | 2.00e-09 | 94.6% | 14.3% |
D5
high
residues 535-574
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3e9lA02 | 1.20.80.40 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › Prp8 RNase H domain, fingers region | 0.55 | 42.0 | 3.44e-01 | 100.0% | 52.6% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3420021 | 101.1.1.121 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 | 0.58 | 40.0 | 3.01e-01 | 80.0% | 27.2% |
| 3281567 | 101.1.2.26 ↗ | alpha arrays › HTH › HTH › winged helix domain › HxlR | 0.56 | 42.0 | 3.21e-01 | 95.0% | 46.4% |
| 3495366 | 355.1.1.0 ↗ | few secondary structure elements › Trefoil/Plexin domain-like › Trefoil/Plexin domain-like › Trefoil/Plexin domain-like | 0.56 | 42.0 | 4.20e-01 | 85.0% | 82.5% |
| 3475868 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.55 | 41.0 | 3.62e-01 | 87.5% | 52.3% |
| 3397207 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.51 | 35.0 | 2.51e-01 | 72.5% | 22.8% |
| 5031515 | 101.1.2.927 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7347 | 0.51 | 36.0 | 3.09e-01 | 95.0% | 66.3% |